| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110302
Identifier: 222110302
GI number: 222110302
Start: 1136640
End: 1137608
Strand: Direct
Name: 222110302
Synonym: Dtpsy_1089
Alternate gene names: NA
Gene position: 1136640-1137608 (Clockwise)
Preceding gene: 222110301
Following gene: 222110303
Centisome position: 29.94
GC content: 66.87
Gene sequence:
>969_bases ATGAGTGAGCCCATGGGCGCCGCTGGGGGGATTGATCATCGGATGCAGGATCACGGAACTGAACCGGCGGGCGGCGTTAC CGCGGGGCAGTTGCTGAGGCAACTGCGCGAATCTGCAGGGGTCCATGTTGATGTGCTGGCCGGAACGCTGAAGGTGCCCG CGAACAAACTGCATGCGCTGGAAGCGGACCAATACGACGCATTTCCCGACGCCGTCTTCATGCGGGCGTTGGCGTCGGGC GTCTGCCGGACCTTGAAGGCCGATGCTGCGCCGGTGCTCGCATTGCTGCCCCAGAGCGGCCCCGTGCAGCTTGTGGTGGA CAAGGGACTCAACGCGTCGTTCAAAGACCCTGGTCACCGGTTCATCAAGGGGGGAACGCTGGAGCGACCCAGATCGCGCA TGATGGGCGTGACGGTTGCCGCGCTGTTGGCCGCCGCGGTGGCCATCGCCTTTCTCCCGAAGGGCAACGACAGTTTGCCG GTCGCCAGCAGTCCGGAGGCGGTAACACCGCCACAGCGCGCGCTCGAAGCCACGCAACTGGACCCGGTGACTGCTGCGGT GCCCTCAGAGTCCGTTGCCTCAGGGGGACAGGCCACTGTGCGGGCAGAGCCATCTTCTGCTGCGGTGGCCTCAGCGGCCC TCGCCGCATCGGCCCCCGCTGCGGCGGTGGAGCCGGCCCCATCCCAAGGCGGGACCAACGAGGCCGGAGTTGACGCCAAG GGCACCGAGGCTTCGGGCGTGCTGGTCATTCGCGCCCGGGGAGAATCCTGGATCCAGGTGCGCAACGCCGCGGGCGGCGT AGTGCTGCAGAAGATCCTGGCTGCGGGCGAGAGTGTTTCCGCGGCGGGCAGCCCTCCCTGGTCGGTCGTCATTGGCAAGG CGGATGCCACGGAGGTGGTTGTGCGCGGCCAGCCCATGGATCTGAATGCGATTGCGCGCGAGAACGTTGCGCGTTTCGAG GTGAAGTAA
Upstream 100 bases:
>100_bases GTGCTCAAGGAGTTCGTGGCCATGCGCCAGTTGGGTGATCAATTGCGCAAGCGCTTCCCCAACGCAAAAGAAACCCTGGC ATTCGAACGAGGGGCCTTCG
Downstream 100 bases:
>100_bases ATGAATATCTCCGGCACAGCCGCACCGATCGCTATGGCACAGCCCCAGGCACGCCGCTCGCGGCAGGCACGCATCGTCTG GGGCAGCCGGGTGGTCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSEPMGAAGGIDHRMQDHGTEPAGGVTAGQLLRQLRESAGVHVDVLAGTLKVPANKLHALEADQYDAFPDAVFMRALASG VCRTLKADAAPVLALLPQSGPVQLVVDKGLNASFKDPGHRFIKGGTLERPRSRMMGVTVAALLAAAVAIAFLPKGNDSLP VASSPEAVTPPQRALEATQLDPVTAAVPSESVASGGQATVRAEPSSAAVASAALAASAPAAAVEPAPSQGGTNEAGVDAK GTEASGVLVIRARGESWIQVRNAAGGVVLQKILAAGESVSAAGSPPWSVVIGKADATEVVVRGQPMDLNAIARENVARFE VK
Sequences:
>Translated_322_residues MSEPMGAAGGIDHRMQDHGTEPAGGVTAGQLLRQLRESAGVHVDVLAGTLKVPANKLHALEADQYDAFPDAVFMRALASG VCRTLKADAAPVLALLPQSGPVQLVVDKGLNASFKDPGHRFIKGGTLERPRSRMMGVTVAALLAAAVAIAFLPKGNDSLP VASSPEAVTPPQRALEATQLDPVTAAVPSESVASGGQATVRAEPSSAAVASAALAASAPAAAVEPAPSQGGTNEAGVDAK GTEASGVLVIRARGESWIQVRNAAGGVVLQKILAAGESVSAAGSPPWSVVIGKADATEVVVRGQPMDLNAIARENVARFE VK >Mature_321_residues SEPMGAAGGIDHRMQDHGTEPAGGVTAGQLLRQLRESAGVHVDVLAGTLKVPANKLHALEADQYDAFPDAVFMRALASGV CRTLKADAAPVLALLPQSGPVQLVVDKGLNASFKDPGHRFIKGGTLERPRSRMMGVTVAALLAAAVAIAFLPKGNDSLPV ASSPEAVTPPQRALEATQLDPVTAAVPSESVASGGQATVRAEPSSAAVASAALAASAPAAAVEPAPSQGGTNEAGVDAKG TEASGVLVIRARGESWIQVRNAAGGVVLQKILAAGESVSAAGSPPWSVVIGKADATEVVVRGQPMDLNAIARENVARFEV K
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32551; Mature: 32420
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPMGAAGGIDHRMQDHGTEPAGGVTAGQLLRQLRESAGVHVDVLAGTLKVPANKLHAL CCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECEEECCHHHHHCC EADQYDAFPDAVFMRALASGVCRTLKADAAPVLALLPQSGPVQLVVDKGLNASFKDPGHR CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCC FIKGGTLERPRSRMMGVTVAALLAAAVAIAFLPKGNDSLPVASSPEAVTPPQRALEATQL EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCC DPVTAAVPSESVASGGQATVRAEPSSAAVASAALAASAPAAAVEPAPSQGGTNEAGVDAK CCCCCCCCCHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GTEASGVLVIRARGESWIQVRNAAGGVVLQKILAAGESVSAAGSPPWSVVIGKADATEVV CCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEE VRGQPMDLNAIARENVARFEVK EECCCCCHHHHHHCCCEEEECC >Mature Secondary Structure SEPMGAAGGIDHRMQDHGTEPAGGVTAGQLLRQLRESAGVHVDVLAGTLKVPANKLHAL CCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECEEECCHHHHHCC EADQYDAFPDAVFMRALASGVCRTLKADAAPVLALLPQSGPVQLVVDKGLNASFKDPGHR CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCC FIKGGTLERPRSRMMGVTVAALLAAAVAIAFLPKGNDSLPVASSPEAVTPPQRALEATQL EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCC DPVTAAVPSESVASGGQATVRAEPSSAAVASAALAASAPAAAVEPAPSQGGTNEAGVDAK CCCCCCCCCHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GTEASGVLVIRARGESWIQVRNAAGGVVLQKILAAGESVSAAGSPPWSVVIGKADATEVV CCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEE VRGQPMDLNAIARENVARFEVK EECCCCCHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA