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The map label for this gene is 222110301

Identifier: 222110301

GI number: 222110301

Start: 1135820

End: 1136647

Strand: Direct

Name: 222110301

Synonym: Dtpsy_1088

Alternate gene names: NA

Gene position: 1135820-1136647 (Clockwise)

Preceding gene: 222110300

Following gene: 222110302

Centisome position: 29.92

GC content: 63.04

Gene sequence:

>828_bases
ATGGCGAAGTGGCGGATCAATCATGGCGGGTGGCAGGCGATGGCGGCGATCGGCATTGCCGTTGTCGTCTCGGGCCTTGC
CGGTTGTGCCCACCAAGGGGCGTCCGATGCCAATGGTGCCGTGGCGGAATCCGCGTCCGGCGGCGGCGAAGCCGACGTGC
GTCGCCGTGCACGTATCCGGCTGGAGCTGGCTGCGAACTACCTGCAAATGGGGCAGACCACCGTGGCCATGGAGGAGGTG
CGGCAGGCGATCACGACCGATCCCACGTATGCCGACGCCTACCACCTTCGCGGCTTGATATACATGAATATGGGCGACCT
GGCGCTCGCGGAAGACAGCCTCAAGCGCGCCCAAGGCATGAAGCCTTCCGATCCAGACATCATGCACAACTATGGCTGGC
TGCAGTGCCAGCGCCAGCAGTACGACGTCGCCAATCAGATGTTCGAGCGGGCGCTTGCCGTGCCGAGTTACAAGGCACGC
AGCAAGACGCTGATGTCCCAGGGCCTGTGCTACCAGCGGGCGGGGCGTCTTGCAGAGGCCGAACAAGCGCTGAAGCAGGC
CTATGAGATTGATGCGGGCAACCCGGCGGTGGGGTACCACTTGGCGGCCGTGCTGTTTGCGCGGGGCGAGGCCAAGCGGG
CGCAGTTTTATGTCCGTCGCGTGAACAATGGCGAGTATGCCAATGCCGAGTCTCTGTGGTTGGGCGTGAAGATCGAACGC
GTGCTCAAGGAGTTCGTGGCCATGCGCCAGTTGGGTGATCAATTGCGCAAGCGCTTCCCCAACGCAAAAGAAACCCTGGC
ATTCGAACGAGGGGCCTTCGATGAGTGA

Upstream 100 bases:

>100_bases
AAGGACCGAACACGGGTCAATGAACGCATGGCCAAGCTCAGGACCATCGAGATCAAGCCGGTCATCTGACGGCGTGGCGC
AACAATTACGGGAGGCTTTC

Downstream 100 bases:

>100_bases
GCCCATGGGCGCCGCTGGGGGGATTGATCATCGGATGCAGGATCACGGAACTGAACCGGCGGGCGGCGTTACCGCGGGGC
AGTTGCTGAGGCAACTGCGC

Product: type IV pilus biogenesis/stability protein pilw

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Fimbrial Biogenesis And Twitching Motility Protein; Fimbrial Biogenesis Protein; Type IV Pilus Biogenesis Protein PilF; Type 4 Fimbrial Biogenesis Protein; PilF Type IV Pilus Assembly Protein; Type IV Pilus Assembly Protein PilF; TPR Repeat-Containing Pilus Assembly Protein PilF; Type Iv Pilus Biogenesis/Stability Protein Pilw; Type IV Fimbrial Biogenesis Protein; Tpr Repeat Protein; Type 4 Fimbrial Biogenesis Protein PilF; Protein Involved In Fimbrial Biogenesis; Type 4 Pilus Biogenesis Protein; TPR Domain-Containing Protein; Type IV Pilus Biogenesis Protein Pilf; Lipoprotein

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MAKWRINHGGWQAMAAIGIAVVVSGLAGCAHQGASDANGAVAESASGGGEADVRRRARIRLELAANYLQMGQTTVAMEEV
RQAITTDPTYADAYHLRGLIYMNMGDLALAEDSLKRAQGMKPSDPDIMHNYGWLQCQRQQYDVANQMFERALAVPSYKAR
SKTLMSQGLCYQRAGRLAEAEQALKQAYEIDAGNPAVGYHLAAVLFARGEAKRAQFYVRRVNNGEYANAESLWLGVKIER
VLKEFVAMRQLGDQLRKRFPNAKETLAFERGAFDE

Sequences:

>Translated_275_residues
MAKWRINHGGWQAMAAIGIAVVVSGLAGCAHQGASDANGAVAESASGGGEADVRRRARIRLELAANYLQMGQTTVAMEEV
RQAITTDPTYADAYHLRGLIYMNMGDLALAEDSLKRAQGMKPSDPDIMHNYGWLQCQRQQYDVANQMFERALAVPSYKAR
SKTLMSQGLCYQRAGRLAEAEQALKQAYEIDAGNPAVGYHLAAVLFARGEAKRAQFYVRRVNNGEYANAESLWLGVKIER
VLKEFVAMRQLGDQLRKRFPNAKETLAFERGAFDE
>Mature_274_residues
AKWRINHGGWQAMAAIGIAVVVSGLAGCAHQGASDANGAVAESASGGGEADVRRRARIRLELAANYLQMGQTTVAMEEVR
QAITTDPTYADAYHLRGLIYMNMGDLALAEDSLKRAQGMKPSDPDIMHNYGWLQCQRQQYDVANQMFERALAVPSYKARS
KTLMSQGLCYQRAGRLAEAEQALKQAYEIDAGNPAVGYHLAAVLFARGEAKRAQFYVRRVNNGEYANAESLWLGVKIERV
LKEFVAMRQLGDQLRKRFPNAKETLAFERGAFDE

Specific function: Unknown

COG id: COG3063

COG function: function code NU; Tfp pilus assembly protein PilF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30395; Mature: 30264

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKWRINHGGWQAMAAIGIAVVVSGLAGCAHQGASDANGAVAESASGGGEADVRRRARIR
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCHHHHHHHHHHH
LELAANYLQMGQTTVAMEEVRQAITTDPTYADAYHLRGLIYMNMGDLALAEDSLKRAQGM
HHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHCEEEEEECCCHHHHHHHHHHHCCC
KPSDPDIMHNYGWLQCQRQQYDVANQMFERALAVPSYKARSKTLMSQGLCYQRAGRLAEA
CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHCCHHHH
EQALKQAYEIDAGNPAVGYHLAAVLFARGEAKRAQFYVRRVNNGEYANAESLWLGVKIER
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHEEEHHHHHH
VLKEFVAMRQLGDQLRKRFPNAKETLAFERGAFDE
HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
AKWRINHGGWQAMAAIGIAVVVSGLAGCAHQGASDANGAVAESASGGGEADVRRRARIR
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCHHHHHHHHHHH
LELAANYLQMGQTTVAMEEVRQAITTDPTYADAYHLRGLIYMNMGDLALAEDSLKRAQGM
HHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHCEEEEEECCCHHHHHHHHHHHCCC
KPSDPDIMHNYGWLQCQRQQYDVANQMFERALAVPSYKARSKTLMSQGLCYQRAGRLAEA
CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHCCHHHH
EQALKQAYEIDAGNPAVGYHLAAVLFARGEAKRAQFYVRRVNNGEYANAESLWLGVKIER
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHEEEHHHHHH
VLKEFVAMRQLGDQLRKRFPNAKETLAFERGAFDE
HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA