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The map label for this gene is yrdA [C]

Identifier: 222110122

GI number: 222110122

Start: 931973

End: 932497

Strand: Direct

Name: yrdA [C]

Synonym: Dtpsy_0908

Alternate gene names: 222110122

Gene position: 931973-932497 (Clockwise)

Preceding gene: 222110118

Following gene: 222110123

Centisome position: 24.55

GC content: 67.62

Gene sequence:

>525_bases
ATGGCGATCTATGAACTCGACGGCGTGGCGCCGCAGGTGGCCGCATCGGCCTGGGTGGCCGACAGTGGCCAGGTGATGGG
CGACGTGGTGCTGGGCGGGGACGCCAGCGTGTGGTTCGGCACCGTGGTGCGTGGCGACACGGCGTGCATCACCATCGGCG
CGGGCACCAACGTGCAGGACGCGAGCGTGCTGCACGCCGACATCGGCCAGCCGCTGGTGATCGGTGAGCGCGTCACCGTG
GGCCACCAGGTCATGCTGCATGGCTGCACCGTCGGGGATGAATCACTGATCGGCATTGGCGCCATCGTGCTCAACGGCGC
GAAGATCGGCCGCAACTGCCTGGTGGGCGCCGGCTCGCTGGTCACCGAAGGCAAGGAATTTCCCGACGGATCGATGATCC
TGGGCAGTCCGGCCAAGGTGGTGCGCCAGCTCACGCCCGAGCAGATCGAAGGGCTGCGCCAGAGTGCGCGGCATTACATG
GAAAACGCGCGCCGCTTCAAGGCGGGTCTGCGCAAGCTGGGGTAA

Upstream 100 bases:

>100_bases
TTCAGGGTCGCAGAGGCGCAAGACCTCCAGGGCACGTTGGCGAAGCTCCATCCCTACAATTCTAGGTTCCCCCTACACAA
ACAACGGAGACAAACAAGCG

Downstream 100 bases:

>100_bases
TAGCCCGGCCGTTGATTGACTGGAAATACAGCGTGTCCGAACTGCACAAGTTTTTGTTTGATGGCCTGCCCGTGCGCGGC
ATGATCGTGCGCCTGACCGA

Product: transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MAIYELDGVAPQVAASAWVADSGQVMGDVVLGGDASVWFGTVVRGDTACITIGAGTNVQDASVLHADIGQPLVIGERVTV
GHQVMLHGCTVGDESLIGIGAIVLNGAKIGRNCLVGAGSLVTEGKEFPDGSMILGSPAKVVRQLTPEQIEGLRQSARHYM
ENARRFKAGLRKLG

Sequences:

>Translated_174_residues
MAIYELDGVAPQVAASAWVADSGQVMGDVVLGGDASVWFGTVVRGDTACITIGAGTNVQDASVLHADIGQPLVIGERVTV
GHQVMLHGCTVGDESLIGIGAIVLNGAKIGRNCLVGAGSLVTEGKEFPDGSMILGSPAKVVRQLTPEQIEGLRQSARHYM
ENARRFKAGLRKLG
>Mature_173_residues
AIYELDGVAPQVAASAWVADSGQVMGDVVLGGDASVWFGTVVRGDTACITIGAGTNVQDASVLHADIGQPLVIGERVTVG
HQVMLHGCTVGDESLIGIGAIVLNGAKIGRNCLVGAGSLVTEGKEFPDGSMILGSPAKVVRQLTPEQIEGLRQSARHYME
NARRFKAGLRKLG

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=158, Percent_Identity=46.2025316455696, Blast_Score=144, Evalue=4e-36,
Organism=Escherichia coli, GI1787667, Length=173, Percent_Identity=35.8381502890173, Blast_Score=121, Evalue=2e-29,
Organism=Escherichia coli, GI87081681, Length=174, Percent_Identity=30.4597701149425, Blast_Score=103, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18021; Mature: 17890

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIYELDGVAPQVAASAWVADSGQVMGDVVLGGDASVWFGTVVRGDTACITIGAGTNVQD
CEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEECCEEEEEECCCCCCCC
ASVLHADIGQPLVIGERVTVGHQVMLHGCTVGDESLIGIGAIVLNGAKIGRNCLVGAGSL
CCEEECCCCCCEEECCEECCCCEEEEEECCCCCCCHHHHHHEEECCCHHCCEEEEECCHH
VTEGKEFPDGSMILGSPAKVVRQLTPEQIEGLRQSARHYMENARRFKAGLRKLG
HCCCCCCCCCCEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AIYELDGVAPQVAASAWVADSGQVMGDVVLGGDASVWFGTVVRGDTACITIGAGTNVQD
EEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEECCEEEEEECCCCCCCC
ASVLHADIGQPLVIGERVTVGHQVMLHGCTVGDESLIGIGAIVLNGAKIGRNCLVGAGSL
CCEEECCCCCCEEECCEECCCCEEEEEECCCCCCCHHHHHHEEECCCHHCCEEEEECCHH
VTEGKEFPDGSMILGSPAKVVRQLTPEQIEGLRQSARHYMENARRFKAGLRKLG
HCCCCCCCCCCEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]