| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
Click here to switch to the map view.
The map label for this gene is yaaI [H]
Identifier: 222110067
GI number: 222110067
Start: 879440
End: 880024
Strand: Direct
Name: yaaI [H]
Synonym: Dtpsy_0853
Alternate gene names: 222110067
Gene position: 879440-880024 (Clockwise)
Preceding gene: 222110066
Following gene: 222110068
Centisome position: 23.16
GC content: 66.67
Gene sequence:
>585_bases GTGGCGCGCCCCGCTGCATTGCGCCGCACGCCGCTGCCGCGCAGCAAACACGTGCTGCTGTTGGTGGATGTGATCAATCC GCTGAATTTCCCTACAGCGGCAGACCTGCTGCCCGGAGCGGTACGCGCCGCGAACGCCATTGCGCGGCTGAAGGCACGCC TGGCGCGGCGCGGGGTCACGGCGATCTATGCCAACGACAACTACGGCACGTGGCACAGCGACTTCCGTGACATTCTCACG GCCTGCCGCGCGCTGCCGGGGGCGCGCGGCGAGATGGCCTGCCTGCTTGCGCCCGCGCCGCAGGATCTGGTGATCCTCAA GCCACAGCATTCGGCGTTCCATTCGACTCCCTTGCAGCATTTGCTGGACAAGATGCAGACCGAGCAGCTGATCATCGTGG GCCTGGCCGCCGACATGTGCGTGATGCTGACGGCCACCGATGCGCGCATGCTGGGCTACAAGGTGTGGGTGCCGTCGGAT TGCACCGCCGCGGAATCGGAACACCGCAAGACGGAGGCCCTGCGGCAATTGCATGAGGTGTTCAAGTGCGCCGTACGGCC TGCGGTACGGGCGGCTGCACCCTGA
Upstream 100 bases:
>100_bases GGCGGTGCTGCCTCCGCCGGAAGAGGTCAAACAGGTAGAGACGGCCATTGGCGCGTCGCGCGCGGAGCAGCAACGCGACG CGATGCTTTGAGGAGGCTGC
Downstream 100 bases:
>100_bases CTGACCGGAGCGACCGCTATGTTCAACCTGGACTTACCCGCCGCAGAGCTGGTGCTGCGCGCCGCCATGGTCTACGGCCT GCTGCTGGCGCTCATGCGCG
Product: isochorismatase hydrolase
Products: 2,3-Dihydro-2,3-dihydroxybenzoate; Pyruvate [C]
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MARPAALRRTPLPRSKHVLLLVDVINPLNFPTAADLLPGAVRAANAIARLKARLARRGVTAIYANDNYGTWHSDFRDILT ACRALPGARGEMACLLAPAPQDLVILKPQHSAFHSTPLQHLLDKMQTEQLIIVGLAADMCVMLTATDARMLGYKVWVPSD CTAAESEHRKTEALRQLHEVFKCAVRPAVRAAAP
Sequences:
>Translated_194_residues MARPAALRRTPLPRSKHVLLLVDVINPLNFPTAADLLPGAVRAANAIARLKARLARRGVTAIYANDNYGTWHSDFRDILT ACRALPGARGEMACLLAPAPQDLVILKPQHSAFHSTPLQHLLDKMQTEQLIIVGLAADMCVMLTATDARMLGYKVWVPSD CTAAESEHRKTEALRQLHEVFKCAVRPAVRAAAP >Mature_193_residues ARPAALRRTPLPRSKHVLLLVDVINPLNFPTAADLLPGAVRAANAIARLKARLARRGVTAIYANDNYGTWHSDFRDILTA CRALPGARGEMACLLAPAPQDLVILKPQHSAFHSTPLQHLLDKMQTEQLIIVGLAADMCVMLTATDARMLGYKVWVPSDC TAAESEHRKTEALRQLHEVFKCAVRPAVRAAAP
Specific function: Required For Production Of 2,3-Dhb. Also Serves As An Aryl Carrier Protein And Plays A Role In Enterobactin Assembly. [C]
COG id: COG1335
COG function: function code Q; Amidases related to nicotinamidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the isochorismatase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000868 [H]
Pfam domain/function: PF00857 Isochorismatase [H]
EC number: 3.3.2.1 [C]
Molecular weight: Translated: 21198; Mature: 21067
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPAALRRTPLPRSKHVLLLVDVINPLNFPTAADLLPGAVRAANAIARLKARLARRGVT CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCE AIYANDNYGTWHSDFRDILTACRALPGARGEMACLLAPAPQDLVILKPQHSAFHSTPLQH EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECCCCCCHHCCHHHH LLDKMQTEQLIIVGLAADMCVMLTATDARMLGYKVWVPSDCTAAESEHRKTEALRQLHEV HHHHHCCCCEEEEEEHHHHEEEEEECCHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHH FKCAVRPAVRAAAP HHHHHHHHHHCCCC >Mature Secondary Structure ARPAALRRTPLPRSKHVLLLVDVINPLNFPTAADLLPGAVRAANAIARLKARLARRGVT CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCE AIYANDNYGTWHSDFRDILTACRALPGARGEMACLLAPAPQDLVILKPQHSAFHSTPLQH EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECCCCCCHHCCHHHH LLDKMQTEQLIIVGLAADMCVMLTATDARMLGYKVWVPSDCTAAESEHRKTEALRQLHEV HHHHHCCCCEEEEEEHHHHEEEEEECCHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHH FKCAVRPAVRAAAP HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2O; Isochorismate [C]
Specific reaction: H2O + Isochorismate --> 2,3-Dihydro-2,3-dihydroxybenzoate + Pyruvate [C]
General reaction: Ether hydrolysis [C]
Inhibitor: Fe2+ [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]