| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110026
Identifier: 222110026
GI number: 222110026
Start: 842901
End: 843719
Strand: Direct
Name: 222110026
Synonym: Dtpsy_0811
Alternate gene names: NA
Gene position: 842901-843719 (Clockwise)
Preceding gene: 222110025
Following gene: 222110035
Centisome position: 22.2
GC content: 73.38
Gene sequence:
>819_bases ATGCTGCTGGTAGGGTGCGATTTTTCCAGCAGTCCCAGTCGGCGCAAGCCCATCGTGCTGGCGCTGGGCGCGCTGCAAGG CGGCAGCGTGGTGCTGCAAGACCTGCAGCCGCTGGATACGCTCGCCGCCTTCGGCCGATGGCTGGCCGCGCCGCGCGCGT GGGTGGGCGGCTTCGATCTGCCCTTCGGCCTGCCCCGCGAACTCCTCACTGGACTCGGCTGGCCGCTCGAATGGGCGAGC AGCATCGCGCACTACCGCGGCCTCACGCGCGCGCAAGTGCGTGAAACCTTTGCCGCGTTCTGCGCCGCGCGCCCTGCCGG CGCCAAGCTGGCCCACCGCGCCACGGACCGTCCCGCGGGCTCCAGCCCGTCGATGAAATGGGTGAACCCACCCGTGGCCT ACATGCTGCACGCGGGCGTGCCGCTGCTGCTGGAGGCGGGTGTGCACCTGCCTGGCCTGCATGCCGGGGACCCGCGGCGC GTGGCGCTGGAGGCCTACCCCGGCCTGCTGGCGCGCGAGCTGATCGGGCGGCGCAGCTACAAGAGCGACGCGCGTGCGCG CCAGACGGCCGACCGGCACGCGGCGCGCACGGAGCTGCTGGGCCGCCTGGAGTGCGGCGACACCCGCCTGGGCCTGCGCC TGACAGTGGATGCCGCGCAGCGCACGGCACTGCTGGACGACGGCAGCGGCGACCGCCTGGATGCGGTGCTGTGCCTGCTG CAGGCCGCATGGGCATGGCGCTGCCGGCAGCAGGGCGACCTGCGCTACGGCCTGCCGCCCGACATGGACCCGCTGGAGGG CTGGATCGTCACGGCGTAA
Upstream 100 bases:
>100_bases CTAGCCAAGGCCCCGGCCTTGGCGTCGTCACGCGCCTAGATTGGCGCGGTTTTCACGCCCTTCACACTGGCAAAAACAGT GTGAACAGGCCCTGGCTGCA
Downstream 100 bases:
>100_bases CGTCTGGTCGTGCAGGTGCCGCGTCCAGCTCCACCCAGCCTGCGCCGCATTGCACATGTGCGCCGCCATGCCGCGCCAGG CAGAGCAGCGCAGCGGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MLLVGCDFSSSPSRRKPIVLALGALQGGSVVLQDLQPLDTLAAFGRWLAAPRAWVGGFDLPFGLPRELLTGLGWPLEWAS SIAHYRGLTRAQVRETFAAFCAARPAGAKLAHRATDRPAGSSPSMKWVNPPVAYMLHAGVPLLLEAGVHLPGLHAGDPRR VALEAYPGLLARELIGRRSYKSDARARQTADRHAARTELLGRLECGDTRLGLRLTVDAAQRTALLDDGSGDRLDAVLCLL QAAWAWRCRQQGDLRYGLPPDMDPLEGWIVTA
Sequences:
>Translated_272_residues MLLVGCDFSSSPSRRKPIVLALGALQGGSVVLQDLQPLDTLAAFGRWLAAPRAWVGGFDLPFGLPRELLTGLGWPLEWAS SIAHYRGLTRAQVRETFAAFCAARPAGAKLAHRATDRPAGSSPSMKWVNPPVAYMLHAGVPLLLEAGVHLPGLHAGDPRR VALEAYPGLLARELIGRRSYKSDARARQTADRHAARTELLGRLECGDTRLGLRLTVDAAQRTALLDDGSGDRLDAVLCLL QAAWAWRCRQQGDLRYGLPPDMDPLEGWIVTA >Mature_272_residues MLLVGCDFSSSPSRRKPIVLALGALQGGSVVLQDLQPLDTLAAFGRWLAAPRAWVGGFDLPFGLPRELLTGLGWPLEWAS SIAHYRGLTRAQVRETFAAFCAARPAGAKLAHRATDRPAGSSPSMKWVNPPVAYMLHAGVPLLLEAGVHLPGLHAGDPRR VALEAYPGLLARELIGRRSYKSDARARQTADRHAARTELLGRLECGDTRLGLRLTVDAAQRTALLDDGSGDRLDAVLCLL QAAWAWRCRQQGDLRYGLPPDMDPLEGWIVTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29450; Mature: 29450
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLVGCDFSSSPSRRKPIVLALGALQGGSVVLQDLQPLDTLAAFGRWLAAPRAWVGGFDL CEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC PFGLPRELLTGLGWPLEWASSIAHYRGLTRAQVRETFAAFCAARPAGAKLAHRATDRPAG CCCCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCC SSPSMKWVNPPVAYMLHAGVPLLLEAGVHLPGLHAGDPRRVALEAYPGLLARELIGRRSY CCCCCCCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCCCCEEEHHHHCCHHHHHHHHCCCC KSDARARQTADRHAARTELLGRLECGDTRLGLRLTVDAAQRTALLDDGSGDRLDAVLCLL CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHEEEECCCCCCHHHHHHHHH QAAWAWRCRQQGDLRYGLPPDMDPLEGWIVTA HHHHHHHHHHCCCEEECCCCCCCCCCCEEECC >Mature Secondary Structure MLLVGCDFSSSPSRRKPIVLALGALQGGSVVLQDLQPLDTLAAFGRWLAAPRAWVGGFDL CEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC PFGLPRELLTGLGWPLEWASSIAHYRGLTRAQVRETFAAFCAARPAGAKLAHRATDRPAG CCCCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCC SSPSMKWVNPPVAYMLHAGVPLLLEAGVHLPGLHAGDPRRVALEAYPGLLARELIGRRSY CCCCCCCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCCCCEEEHHHHCCHHHHHHHHCCCC KSDARARQTADRHAARTELLGRLECGDTRLGLRLTVDAAQRTALLDDGSGDRLDAVLCLL CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHEEEECCCCCCHHHHHHHHH QAAWAWRCRQQGDLRYGLPPDMDPLEGWIVTA HHHHHHHHHHCCCEEECCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA