| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110025
Identifier: 222110025
GI number: 222110025
Start: 841746
End: 842627
Strand: Direct
Name: 222110025
Synonym: Dtpsy_0810
Alternate gene names: NA
Gene position: 841746-842627 (Clockwise)
Preceding gene: 222110024
Following gene: 222110026
Centisome position: 22.17
GC content: 72.34
Gene sequence:
>882_bases ATGTCGCTCAACGCCTTCGCACTCATCCTCCTCGCCGGCCTGATCCACGCCGGCTGGAACATCGCCGCCAAGAAGGCCGG CGGCGATGCGCGTTTCGCCTTCTTCACCTCGGTGCTCATGATGCTGGTGTGGGCACCGTTGGGCTGGTGGCTCGGGCGTG ACGCCGTGCCGCTGTGGGGCGCGCGCGAGTGGGCCATCGTGGCCCTGAGCGGCGTGCTGCACGTGCTGTACTACGTGATC CTGCTGCGCGGCTACCGCAAGGCCGACCTCACCGTGGTCTACCCCCTCGCGCGGGGCACGGGGCCGCTGCTGACCGCGCT GGTGGCCGTCACGCTGCTGGGCGAGCGGCTGTCCGCCTGGGGCGTGCTGGGCATCGTGGCGGTGGTGGGCGGCGTCTTCC TGATTGCGGGCGGCCCCGGGCTGTTGCGCGCGGCGCACGACCCCCAGGCGCGCCTGCGTGTGCGCGCGGGCCTGCGCTAC GGCGTGCTGACCGGCATCTTCATCGCCAGCTATACCGTGGTGGATGGCTACGCCGTCAAGGCCATGCTGCTGTCGCCCGT GCTGGTGGACTACATGGGCAACTTCGTGCGCGTGGCAGTGCTCGCCCCCGTGGCCCTGCGCAACCGCGCCGAGACGGCGC GCCTGTGGGCCGGGCAGTGGCGCTTTGCGCTGCTGGTGGCCGTGGTGAGCCCGATCGCCTACGTGCTGGTGCTGTTTGCC ATGCAGGAGGCGCCCATGGCCCACGTGGCGCCGGCGCGCGAGGTCTCCATGCTGTTCGCGGCGCTCATCGGCGGGCACCT GCTGGACGAGGGCGACCGCGCCGCGCGCTTGGCGGGGGCGCTGCTGATTGCCGCCGGCGTGGTGGCGCTGGCGCTGGGCT AG
Upstream 100 bases:
>100_bases CACGTCTGGCGCATGCCGGTGCCGCCGTGGCGCACTGATGCCGCCGACCACCTCCTGAACGCCGCAGCCGGCCGCGAGGC GCTGCGGCGGCGGGCCCTTC
Downstream 100 bases:
>100_bases GGACTGTTCACACTATTTTTGCCAGATGCGTTGCGATCAAAAGGGGCCAGGCGCAAGGCGCCAAACGAAGCTGGGGTGCG ACCCCAGCGCGGCTTGGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSLNAFALILLAGLIHAGWNIAAKKAGGDARFAFFTSVLMMLVWAPLGWWLGRDAVPLWGAREWAIVALSGVLHVLYYVI LLRGYRKADLTVVYPLARGTGPLLTALVAVTLLGERLSAWGVLGIVAVVGGVFLIAGGPGLLRAAHDPQARLRVRAGLRY GVLTGIFIASYTVVDGYAVKAMLLSPVLVDYMGNFVRVAVLAPVALRNRAETARLWAGQWRFALLVAVVSPIAYVLVLFA MQEAPMAHVAPAREVSMLFAALIGGHLLDEGDRAARLAGALLIAAGVVALALG
Sequences:
>Translated_293_residues MSLNAFALILLAGLIHAGWNIAAKKAGGDARFAFFTSVLMMLVWAPLGWWLGRDAVPLWGAREWAIVALSGVLHVLYYVI LLRGYRKADLTVVYPLARGTGPLLTALVAVTLLGERLSAWGVLGIVAVVGGVFLIAGGPGLLRAAHDPQARLRVRAGLRY GVLTGIFIASYTVVDGYAVKAMLLSPVLVDYMGNFVRVAVLAPVALRNRAETARLWAGQWRFALLVAVVSPIAYVLVLFA MQEAPMAHVAPAREVSMLFAALIGGHLLDEGDRAARLAGALLIAAGVVALALG >Mature_292_residues SLNAFALILLAGLIHAGWNIAAKKAGGDARFAFFTSVLMMLVWAPLGWWLGRDAVPLWGAREWAIVALSGVLHVLYYVIL LRGYRKADLTVVYPLARGTGPLLTALVAVTLLGERLSAWGVLGIVAVVGGVFLIAGGPGLLRAAHDPQARLRVRAGLRYG VLTGIFIASYTVVDGYAVKAMLLSPVLVDYMGNFVRVAVLAPVALRNRAETARLWAGQWRFALLVAVVSPIAYVLVLFAM QEAPMAHVAPAREVSMLFAALIGGHLLDEGDRAARLAGALLIAAGVVALALG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31053; Mature: 30921
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNAFALILLAGLIHAGWNIAAKKAGGDARFAFFTSVLMMLVWAPLGWWLGRDAVPLWG CCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC AREWAIVALSGVLHVLYYVILLRGYRKADLTVVYPLARGTGPLLTALVAVTLLGERLSAW CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH GVLGIVAVVGGVFLIAGGPGLLRAAHDPQARLRVRAGLRYGVLTGIFIASYTVVDGYAVK HHHHHHHHHHHHEEEECCCHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH AMLLSPVLVDYMGNFVRVAVLAPVALRNRAETARLWAGQWRFALLVAVVSPIAYVLVLFA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQEAPMAHVAPAREVSMLFAALIGGHLLDEGDRAARLAGALLIAAGVVALALG HHCCCCHHCCCHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLNAFALILLAGLIHAGWNIAAKKAGGDARFAFFTSVLMMLVWAPLGWWLGRDAVPLWG CCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC AREWAIVALSGVLHVLYYVILLRGYRKADLTVVYPLARGTGPLLTALVAVTLLGERLSAW CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH GVLGIVAVVGGVFLIAGGPGLLRAAHDPQARLRVRAGLRYGVLTGIFIASYTVVDGYAVK HHHHHHHHHHHHEEEECCCHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH AMLLSPVLVDYMGNFVRVAVLAPVALRNRAETARLWAGQWRFALLVAVVSPIAYVLVLFA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQEAPMAHVAPAREVSMLFAALIGGHLLDEGDRAARLAGALLIAAGVVALALG HHCCCCHHCCCHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA