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The map label for this gene is ycgF [C]

Identifier: 222110024

GI number: 222110024

Start: 841103

End: 841525

Strand: Direct

Name: ycgF [C]

Synonym: Dtpsy_0809

Alternate gene names: 222110024

Gene position: 841103-841525 (Clockwise)

Preceding gene: 222110023

Following gene: 222110025

Centisome position: 22.15

GC content: 65.01

Gene sequence:

>423_bases
ATGCTGGTCCGTCTTCTCTACGTCAGCCGCGCCGTCGATACCTCGCCCGAGGCCATCGAGGCCATCCTCACCCAGTCGCG
CCAGCACAACCCCGCCAGTGGCATCACGGGCGTGCTGTGCTACGGCGGCGGCATCTTCCTGCAGGCCATCGAAGGCGGCC
GCTCGGCCGTCAGCGACCTATACGGCCACATCCAGCGCGACCCGCGTCACAAGGACGTGGAATTGCTGGCCTTCGAGGAA
ATCACCGAGCGCCGCTTTGGCGGCTGGACCATGGGCCAGGTCAACCTGACCAAGCTCAACCACTCCATCGTGCTCAAGTA
TTCCGAGCGGCCCGAGTTCGACCCCTATGCAGCCTCGGGCAAAGTGTCGTTCGCGCTGCTCGAAGAACTCATGGCCACGG
CCAGCATCATCGGCCGGGCCTGA

Upstream 100 bases:

>100_bases
GGACAGCAAGATGATCAACTCGGTGATGCGCGGGGTGTTCCTCACCAACCCCACGCTGCGCCGCGAATTCCTGGCCCTCA
TTCCCCGAAGGAGCTGACCC

Downstream 100 bases:

>100_bases
GGGTGGACAGCCCCCTGAGCGGCTTGCGCCGCTGTCCCCGACTCCCGCGCGACGTGCGGGACGGGGGCGCCGTCAGTATG
GCGGGGCGGTGCTGCCGGTC

Product: bluf domain-containing protein

Products: NA

Alternate protein names: BLUF Domain Protein; Photopigment And Puc Activator; Bluf Domain Protein; Sensors Of Blue-Light Using FAD; Sensors Of Blue-Light Using FAD Family; Blue-Light Sensor BluF Domain; AppA Protein; Activator Of Photopigment And Puc Expression

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MLVRLLYVSRAVDTSPEAIEAILTQSRQHNPASGITGVLCYGGGIFLQAIEGGRSAVSDLYGHIQRDPRHKDVELLAFEE
ITERRFGGWTMGQVNLTKLNHSIVLKYSERPEFDPYAASGKVSFALLEELMATASIIGRA

Sequences:

>Translated_140_residues
MLVRLLYVSRAVDTSPEAIEAILTQSRQHNPASGITGVLCYGGGIFLQAIEGGRSAVSDLYGHIQRDPRHKDVELLAFEE
ITERRFGGWTMGQVNLTKLNHSIVLKYSERPEFDPYAASGKVSFALLEELMATASIIGRA
>Mature_140_residues
MLVRLLYVSRAVDTSPEAIEAILTQSRQHNPASGITGVLCYGGGIFLQAIEGGRSAVSDLYGHIQRDPRHKDVELLAFEE
ITERRFGGWTMGQVNLTKLNHSIVLKYSERPEFDPYAASGKVSFALLEELMATASIIGRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15393; Mature: 15393

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50925 BLUF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVRLLYVSRAVDTSPEAIEAILTQSRQHNPASGITGVLCYGGGIFLQAIEGGRSAVSDL
CEEEEEEHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCHHHHHHH
YGHIQRDPRHKDVELLAFEEITERRFGGWTMGQVNLTKLNHSIVLKYSERPEFDPYAASG
HHHHCCCCCCCCCHHHHHHHHHHHHCCCEEECEEEEEEECCEEEEEECCCCCCCCCCCCC
KVSFALLEELMATASIIGRA
CHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLVRLLYVSRAVDTSPEAIEAILTQSRQHNPASGITGVLCYGGGIFLQAIEGGRSAVSDL
CEEEEEEHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCHHHHHHH
YGHIQRDPRHKDVELLAFEEITERRFGGWTMGQVNLTKLNHSIVLKYSERPEFDPYAASG
HHHHCCCCCCCCCHHHHHHHHHHHHCCCEEECEEEEEEECCEEEEEECCCCCCCCCCCCC
KVSFALLEELMATASIIGRA
CHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA