| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is folE [H]
Identifier: 222110023
GI number: 222110023
Start: 840374
End: 841099
Strand: Direct
Name: folE [H]
Synonym: Dtpsy_0808
Alternate gene names: 222110023
Gene position: 840374-841099 (Clockwise)
Preceding gene: 222110022
Following gene: 222110024
Centisome position: 22.14
GC content: 65.43
Gene sequence:
>726_bases ATGTCTTCAGAACCCCCAGCACCCCTGAGCGGCGCCGCGCCCGACGAGGGTACGCCCGTCTCCGTCAAGATTCGCGAACG GCTGAACGCGGCGCGCCGGCGCTTCCATGCCAACGACAACATTGCGGAGTTCATCCAGCCCGGCGAGCTGGAGCGCCTGC TGGACGAGGTCGAGGCCAAGATGCAGGGCGTCCTCGACAGCATGGTGATCGACACAGCGGGCGACCACAACACGCAGGCC ACGGCGCGCCGGGTGGCCAAGATGTACCTCAACGAGGTCTTCAAGGGCCGCTACGTGCAGCCGCCGGCGATCACCGAGTT TCCCAACGCCGAGCACCTGAACGAGCTGATGATCGTCGGCCCCGTCACCGTGCGCAGCGCCTGCAGCCACCACTTCTGCC CGGTGATCGGCAAGATCTGGATCGGCGTGCTGCCCAACGAGCACACCAACGTGATCGGTCTGTCCAAGTACGCGCGCCTC GTGGACTGGGTCATGGGGCGTCCCCAGATCCAGGAGGAGGCCGTGGTGCAGCTGGCCGACCTCATCATGGAAAAGACCCA GCCCGACGGGCTGGCCATCGTCATGGAGGCCAGCCACTTCTGTATGTCCTGGCGCGGTGTGCGCGAGATGGACAGCAAGA TGATCAACTCGGTGATGCGCGGGGTGTTCCTCACCAACCCCACGCTGCGCCGCGAATTCCTGGCCCTCATTCCCCGAAGG AGCTGA
Upstream 100 bases:
>100_bases ATTGCTATTGTTTGGATAGCTGCTGGCGCTTGCCCCATAAGCGCTAGAGGCATAAAAGGCTTATAAAGCCTGGATCGGCA TTCGCTGGTACCATGCCGCC
Downstream 100 bases:
>100_bases CCCATGCTGGTCCGTCTTCTCTACGTCAGCCGCGCCGTCGATACCTCGCCCGAGGCCATCGAGGCCATCCTCACCCAGTC GCGCCAGCACAACCCCGCCA
Product: GTP cyclohydrolase i
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MSSEPPAPLSGAAPDEGTPVSVKIRERLNAARRRFHANDNIAEFIQPGELERLLDEVEAKMQGVLDSMVIDTAGDHNTQA TARRVAKMYLNEVFKGRYVQPPAITEFPNAEHLNELMIVGPVTVRSACSHHFCPVIGKIWIGVLPNEHTNVIGLSKYARL VDWVMGRPQIQEEAVVQLADLIMEKTQPDGLAIVMEASHFCMSWRGVREMDSKMINSVMRGVFLTNPTLRREFLALIPRR S
Sequences:
>Translated_241_residues MSSEPPAPLSGAAPDEGTPVSVKIRERLNAARRRFHANDNIAEFIQPGELERLLDEVEAKMQGVLDSMVIDTAGDHNTQA TARRVAKMYLNEVFKGRYVQPPAITEFPNAEHLNELMIVGPVTVRSACSHHFCPVIGKIWIGVLPNEHTNVIGLSKYARL VDWVMGRPQIQEEAVVQLADLIMEKTQPDGLAIVMEASHFCMSWRGVREMDSKMINSVMRGVFLTNPTLRREFLALIPRR S >Mature_240_residues SSEPPAPLSGAAPDEGTPVSVKIRERLNAARRRFHANDNIAEFIQPGELERLLDEVEAKMQGVLDSMVIDTAGDHNTQAT ARRVAKMYLNEVFKGRYVQPPAITEFPNAEHLNELMIVGPVTVRSACSHHFCPVIGKIWIGVLPNEHTNVIGLSKYARLV DWVMGRPQIQEEAVVQLADLIMEKTQPDGLAIVMEASHFCMSWRGVREMDSKMINSVMRGVFLTNPTLRREFLALIPRRS
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=127, Percent_Identity=45.6692913385827, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI4503949, Length=127, Percent_Identity=45.6692913385827, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI66932970, Length=88, Percent_Identity=42.0454545454545, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI66932972, Length=88, Percent_Identity=42.0454545454545, Blast_Score=72, Evalue=6e-13, Organism=Escherichia coli, GI1788476, Length=179, Percent_Identity=31.8435754189944, Blast_Score=107, Evalue=9e-25, Organism=Caenorhabditis elegans, GI17560486, Length=130, Percent_Identity=43.0769230769231, Blast_Score=116, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6321706, Length=187, Percent_Identity=35.2941176470588, Blast_Score=108, Evalue=8e-25, Organism=Drosophila melanogaster, GI24656791, Length=127, Percent_Identity=40.9448818897638, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24656782, Length=127, Percent_Identity=40.9448818897638, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24656796, Length=127, Percent_Identity=40.9448818897638, Blast_Score=96, Evalue=2e-20,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 26982; Mature: 26850
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSEPPAPLSGAAPDEGTPVSVKIRERLNAARRRFHANDNIAEFIQPGELERLLDEVEAK CCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHH MQGVLDSMVIDTAGDHNTQATARRVAKMYLNEVFKGRYVQPPAITEFPNAEHLNELMIVG HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCEEEEC PVTVRSACSHHFCPVIGKIWIGVLPNEHTNVIGLSKYARLVDWVMGRPQIQEEAVVQLAD CHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHH LIMEKTQPDGLAIVMEASHFCMSWRGVREMDSKMINSVMRGVFLTNPTLRREFLALIPRR HHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC S C >Mature Secondary Structure SSEPPAPLSGAAPDEGTPVSVKIRERLNAARRRFHANDNIAEFIQPGELERLLDEVEAK CCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHH MQGVLDSMVIDTAGDHNTQATARRVAKMYLNEVFKGRYVQPPAITEFPNAEHLNELMIVG HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCEEEEC PVTVRSACSHHFCPVIGKIWIGVLPNEHTNVIGLSKYARLVDWVMGRPQIQEEAVVQLAD CHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHH LIMEKTQPDGLAIVMEASHFCMSWRGVREMDSKMINSVMRGVFLTNPTLRREFLALIPRR HHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA