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The map label for this gene is ybhP [H]

Identifier: 222110021

GI number: 222110021

Start: 838246

End: 839013

Strand: Direct

Name: ybhP [H]

Synonym: Dtpsy_0806

Alternate gene names: 222110021

Gene position: 838246-839013 (Clockwise)

Preceding gene: 222110020

Following gene: 222110022

Centisome position: 22.08

GC content: 67.19

Gene sequence:

>768_bases
ATGACCGCAACACCGATCGAACTGCCTGCCGAGCATTCCGGCATCCTGCGCGTAGCGACCTACAACATCCACAAGGGTGT
GCAGGGGCTGGGCCCCGCGCGCCGGCTGGAGATCCACAATCTGGGCCTGGCGGTCGAGCAGCTCGATGCAGACATCGTCT
GCCTGCAGGAGGTGCGCAGGATGAACCGCAAGGAGGCCAGCTACTTCGAGCGTTGGCCCCATGTGCCGCAGGCCGAGTAC
CTGGCCCCCGAAGGTTACGAAGCCATCTACCGCACCAATGCCTTCACGCGCCACGGAGAGCACGGCAACGCGCTGCTCAC
GCGCTGGCCGGTGATCGGCCACCAGCACGAGGACATCTCCGACCATCGCTTCGAGCAGCGCGGCCTGCTGCATGTGGAGG
TGGAGATACAGGGCCGCCGGGTGCATGCCATCGTGGTGCACCTGGGCCTGGTGCCCGGCAGCCGCATCCGCCAGGTGGCG
CAGCTGCAGCGCTTCATCGCGCGCGAGGTGCCCGAGGATGCCCCGCTGGTCGTCGCGGGCGACTTCAACGACTGGGGGCT
GCAGATCAAGCGCATGCTTGCGGGCTTCGGGCTCTTCGAGTACGACGATGCGCCCCAGGCCTTCACCTACCCCGCCCGCC
TGCCCATGGTGCAGCTGGACCATGTGTACGTGCGGGGCCTCACCCCGCTGGGGCTGCAGGTGCCGCGTGGGCGGATCTGG
TGGCGCATGTCGGACCATTTGCCGCTGATCGCAGAGTTCAAGCTCTGA

Upstream 100 bases:

>100_bases
ACACGGCATATGCTTGGATGGGCTGGCGCGAAGCCGCGGACCGCTGCTACTCGCCTTCCAATGCCGAGGCCATACTCTGG
CTGCCACGATTCGTTGGACG

Downstream 100 bases:

>100_bases
CTCCATGGTCGCCCCCACGCGCGCGCACGCTACCGGCCGAGACCACCAGATCCAGCTGCTGCAGGGCACGCAGGAGTTGT
TCCCGGCGCTGATCGCCGAG

Product: endonuclease/exonuclease/phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MTATPIELPAEHSGILRVATYNIHKGVQGLGPARRLEIHNLGLAVEQLDADIVCLQEVRRMNRKEASYFERWPHVPQAEY
LAPEGYEAIYRTNAFTRHGEHGNALLTRWPVIGHQHEDISDHRFEQRGLLHVEVEIQGRRVHAIVVHLGLVPGSRIRQVA
QLQRFIAREVPEDAPLVVAGDFNDWGLQIKRMLAGFGLFEYDDAPQAFTYPARLPMVQLDHVYVRGLTPLGLQVPRGRIW
WRMSDHLPLIAEFKL

Sequences:

>Translated_255_residues
MTATPIELPAEHSGILRVATYNIHKGVQGLGPARRLEIHNLGLAVEQLDADIVCLQEVRRMNRKEASYFERWPHVPQAEY
LAPEGYEAIYRTNAFTRHGEHGNALLTRWPVIGHQHEDISDHRFEQRGLLHVEVEIQGRRVHAIVVHLGLVPGSRIRQVA
QLQRFIAREVPEDAPLVVAGDFNDWGLQIKRMLAGFGLFEYDDAPQAFTYPARLPMVQLDHVYVRGLTPLGLQVPRGRIW
WRMSDHLPLIAEFKL
>Mature_254_residues
TATPIELPAEHSGILRVATYNIHKGVQGLGPARRLEIHNLGLAVEQLDADIVCLQEVRRMNRKEASYFERWPHVPQAEYL
APEGYEAIYRTNAFTRHGEHGNALLTRWPVIGHQHEDISDHRFEQRGLLHVEVEIQGRRVHAIVVHLGLVPGSRIRQVAQ
LQRFIAREVPEDAPLVVAGDFNDWGLQIKRMLAGFGLFEYDDAPQAFTYPARLPMVQLDHVYVRGLTPLGLQVPRGRIWW
RMSDHLPLIAEFKL

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787008, Length=247, Percent_Identity=35.2226720647773, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005135 [H]

Pfam domain/function: PF03372 Exo_endo_phos [H]

EC number: NA

Molecular weight: Translated: 29168; Mature: 29037

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATPIELPAEHSGILRVATYNIHKGVQGLGPARRLEIHNLGLAVEQLDADIVCLQEVRR
CCCCCCCCCCCCCCEEEEEEEEHHCCCCCCCCHHEEEEHHCCEEHHHHCCHHHHHHHHHH
MNRKEASYFERWPHVPQAEYLAPEGYEAIYRTNAFTRHGEHGNALLTRWPVIGHQHEDIS
HCHHHHHHHHHCCCCCCHHHCCCCCCHHHHHCCCCEECCCCCCEEEEECCCCCCCCCCCC
DHRFEQRGLLHVEVEIQGRRVHAIVVHLGLVPGSRIRQVAQLQRFIAREVPEDAPLVVAG
HHHHHHCCEEEEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEC
DFNDWGLQIKRMLAGFGLFEYDDAPQAFTYPARLPMVQLDHVYVRGLTPLGLQVPRGRIW
CCCHHHHHHHHHHHHCCCEEECCCCCCEECCCCCCEEEECEEEEECCCCCCEECCCCEEE
WRMSDHLPLIAEFKL
EEECCCCCEEEEECC
>Mature Secondary Structure 
TATPIELPAEHSGILRVATYNIHKGVQGLGPARRLEIHNLGLAVEQLDADIVCLQEVRR
CCCCCCCCCCCCCEEEEEEEEHHCCCCCCCCHHEEEEHHCCEEHHHHCCHHHHHHHHHH
MNRKEASYFERWPHVPQAEYLAPEGYEAIYRTNAFTRHGEHGNALLTRWPVIGHQHEDIS
HCHHHHHHHHHCCCCCCHHHCCCCCCHHHHHCCCCEECCCCCCEEEEECCCCCCCCCCCC
DHRFEQRGLLHVEVEIQGRRVHAIVVHLGLVPGSRIRQVAQLQRFIAREVPEDAPLVVAG
HHHHHHCCEEEEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEC
DFNDWGLQIKRMLAGFGLFEYDDAPQAFTYPARLPMVQLDHVYVRGLTPLGLQVPRGRIW
CCCHHHHHHHHHHHHCCCEEECCCCCCEECCCCCCEEEECEEEEECCCCCCEECCCCEEE
WRMSDHLPLIAEFKL
EEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]