| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110019
Identifier: 222110019
GI number: 222110019
Start: 836965
End: 837768
Strand: Direct
Name: 222110019
Synonym: Dtpsy_0804
Alternate gene names: NA
Gene position: 836965-837768 (Clockwise)
Preceding gene: 222110018
Following gene: 222110020
Centisome position: 22.05
GC content: 68.16
Gene sequence:
>804_bases ATGCGCATGCTGTTCCGACGGCTGTCCCATACCGGTTTGCTGCTGTGCGTGGCGCTGGGGGTATCGGCTTGCGGCGAGAA GAAAACCGAGCTGGGCGAAGGCGGTTCGGTGGTCACTGGCTCGGCCGGGCCCCAGGGCCCGCGCAACGCCGCGCGCGAGC TGCTGCGCTGCGACAGCCCCGTGGCCACCGTGGCGCTGGCCGAGAGTCCCCACGGCTATGCCACGGGTGGTTACAACCTT CCCACCTCGCCCGTGCCCCTGATCAAGCTCATGGTGCAACAAAGCGGCTGCTTTCGCGTGATGGATCGTGGCGCGGGGCT GCGTGGTACGGTACAGGAGAGCGAATTGCGTGAATCCGGCGTGCTGCGCCCCAACTCGACCGTGGTCAAGGGGCGCGGCT ATGAGGCGCAGTACACGCTCACTCCCAGCCTGACCTTCAGCGAAAGCGATGCCGGGCGCGGCCTGGCGGGCATCATGGGC ATGATTCCGGTGCTGCGCGATCTGGCCGGCCTGATCGGCCTGGCCGAGCAGGTGAAGTTCAAGGAGGCGCAGACGGCGCT ACTGCTGTCGGACAACGAAACCACCGAACAGGTGGCTGCCGCCACGGGCGCGGCCCGCACCACCGATCTGGGCATCGGCG GCATCATGATCGGGCGACTGGGGGGCGCATCCGGAGCAGGTTGGAGCAACACCAACGAAGCCAAGGTGGTTGCCGCCGCC TTCCTGGATACGCACAACGCCCTGGTGGAGCAGGTGCGGGCGCTGCAAGCCAAGCCCCTGCCGCCGCCGGTGCCGAGCCG CTAG
Upstream 100 bases:
>100_bases CTGAGGGGCGCGCGGGCTCCGACACCTAAGCGGCAGGCGCGTTCACGTGCCTGCCGTTTTTGTTTGCCATAACGTGTCCA CAAGCTCTTGGAGGGAGACC
Downstream 100 bases:
>100_bases CGCAGCGCGCATGCACAGGGACGGCGCCATGTACAAAATTCCCGAATCCGTGCTGGTGGTGGTGCACACGCCTGCGCTGG ACGTGCTGCTGCTGCGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MRMLFRRLSHTGLLLCVALGVSACGEKKTELGEGGSVVTGSAGPQGPRNAARELLRCDSPVATVALAESPHGYATGGYNL PTSPVPLIKLMVQQSGCFRVMDRGAGLRGTVQESELRESGVLRPNSTVVKGRGYEAQYTLTPSLTFSESDAGRGLAGIMG MIPVLRDLAGLIGLAEQVKFKEAQTALLLSDNETTEQVAAATGAARTTDLGIGGIMIGRLGGASGAGWSNTNEAKVVAAA FLDTHNALVEQVRALQAKPLPPPVPSR
Sequences:
>Translated_267_residues MRMLFRRLSHTGLLLCVALGVSACGEKKTELGEGGSVVTGSAGPQGPRNAARELLRCDSPVATVALAESPHGYATGGYNL PTSPVPLIKLMVQQSGCFRVMDRGAGLRGTVQESELRESGVLRPNSTVVKGRGYEAQYTLTPSLTFSESDAGRGLAGIMG MIPVLRDLAGLIGLAEQVKFKEAQTALLLSDNETTEQVAAATGAARTTDLGIGGIMIGRLGGASGAGWSNTNEAKVVAAA FLDTHNALVEQVRALQAKPLPPPVPSR >Mature_267_residues MRMLFRRLSHTGLLLCVALGVSACGEKKTELGEGGSVVTGSAGPQGPRNAARELLRCDSPVATVALAESPHGYATGGYNL PTSPVPLIKLMVQQSGCFRVMDRGAGLRGTVQESELRESGVLRPNSTVVKGRGYEAQYTLTPSLTFSESDAGRGLAGIMG MIPVLRDLAGLIGLAEQVKFKEAQTALLLSDNETTEQVAAATGAARTTDLGIGGIMIGRLGGASGAGWSNTNEAKVVAAA FLDTHNALVEQVRALQAKPLPPPVPSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27707; Mature: 27707
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMLFRRLSHTGLLLCVALGVSACGEKKTELGEGGSVVTGSAGPQGPRNAARELLRCDSP CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEECCCCCCCHHHHHHHHHHCCCC VATVALAESPHGYATGGYNLPTSPVPLIKLMVQQSGCFRVMDRGAGLRGTVQESELRESG CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHC VLRPNSTVVKGRGYEAQYTLTPSLTFSESDAGRGLAGIMGMIPVLRDLAGLIGLAEQVKF CCCCCCEEEECCCCEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KEAQTALLLSDNETTEQVAAATGAARTTDLGIGGIMIGRLGGASGAGWSNTNEAKVVAAA HHHCEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHH FLDTHNALVEQVRALQAKPLPPPVPSR HHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRMLFRRLSHTGLLLCVALGVSACGEKKTELGEGGSVVTGSAGPQGPRNAARELLRCDSP CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEECCCCCCCHHHHHHHHHHCCCC VATVALAESPHGYATGGYNLPTSPVPLIKLMVQQSGCFRVMDRGAGLRGTVQESELRESG CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHC VLRPNSTVVKGRGYEAQYTLTPSLTFSESDAGRGLAGIMGMIPVLRDLAGLIGLAEQVKF CCCCCCEEEECCCCEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KEAQTALLLSDNETTEQVAAATGAARTTDLGIGGIMIGRLGGASGAGWSNTNEAKVVAAA HHHCEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHH FLDTHNALVEQVRALQAKPLPPPVPSR HHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA