| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110010
Identifier: 222110010
GI number: 222110010
Start: 827951
End: 828367
Strand: Direct
Name: 222110010
Synonym: Dtpsy_0795
Alternate gene names: NA
Gene position: 827951-828367 (Clockwise)
Preceding gene: 222110009
Following gene: 222110011
Centisome position: 21.81
GC content: 68.82
Gene sequence:
>417_bases ATGGCAGGTCTGACGGCGGGCGCGCCCATGCCCCAATCCATCACGGTGCACGAGCAGTCGCGCGTGCTGGAGGTGACGTT TTCCGACGGCGCACACTTTCGCATCCCGTTCGAGCTGATGCGCGTGTATTCCCCCTCGGCCGAAGTGCAGGGCCATGGGC CGGGCCAGCAGGTGCTGCAGACCGGCAAACGCGACGTCACGTTGACGCGGCTGGAGCCGGTAGGCAACTACGCCGTGCAG CCTACCTTCTCCGACGGGCACGACAGCGGCATCTTCTCGTGGGACTACCTGTACGAGCTGGGCCGCGACGAGCAGGCGCT GTGGGCAGACTATGCCGAGCGGCTGGCCGCCGCCGGCGTGGACCGTGATGCACCCATGGCGCCCAAGGCCGGCGGCCACG GCTGCGGCGGGCATTGA
Upstream 100 bases:
>100_bases TCGCGCCGCCTTGGCTCCGGCGGCGGACAATAGCGGCAGGGCGGCGGTGCGCGGTCTCCGCCGCCGGTGTTCATTCCTTT TCATTGCGCAGGTGAAAGCC
Downstream 100 bases:
>100_bases AGCGCAGCACGGCCCGCCCGCGTGGCCGCGCCGCGCCACGCTTTAGCCTAAATAGCGACAGATGACCTAGGCGCATGCGG GGTTGCCGCTGTACGCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MAGLTAGAPMPQSITVHEQSRVLEVTFSDGAHFRIPFELMRVYSPSAEVQGHGPGQQVLQTGKRDVTLTRLEPVGNYAVQ PTFSDGHDSGIFSWDYLYELGRDEQALWADYAERLAAAGVDRDAPMAPKAGGHGCGGH
Sequences:
>Translated_138_residues MAGLTAGAPMPQSITVHEQSRVLEVTFSDGAHFRIPFELMRVYSPSAEVQGHGPGQQVLQTGKRDVTLTRLEPVGNYAVQ PTFSDGHDSGIFSWDYLYELGRDEQALWADYAERLAAAGVDRDAPMAPKAGGHGCGGH >Mature_137_residues AGLTAGAPMPQSITVHEQSRVLEVTFSDGAHFRIPFELMRVYSPSAEVQGHGPGQQVLQTGKRDVTLTRLEPVGNYAVQP TFSDGHDSGIFSWDYLYELGRDEQALWADYAERLAAAGVDRDAPMAPKAGGHGCGGH
Specific function: Unknown
COG id: COG3536
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14884; Mature: 14752
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLTAGAPMPQSITVHEQSRVLEVTFSDGAHFRIPFELMRVYSPSAEVQGHGPGQQVLQ CCCCCCCCCCCCEEEEECCCEEEEEEECCCCEEEEHHHHHHHHCCCCCCCCCCCHHHHHH TGKRDVTLTRLEPVGNYAVQPTFSDGHDSGIFSWDYLYELGRDEQALWADYAERLAAAGV CCCCCEEEEEECCCCCEEECCCCCCCCCCCEECHHHHHHCCCCCHHHHHHHHHHHHHCCC DRDAPMAPKAGGHGCGGH CCCCCCCCCCCCCCCCCC >Mature Secondary Structure AGLTAGAPMPQSITVHEQSRVLEVTFSDGAHFRIPFELMRVYSPSAEVQGHGPGQQVLQ CCCCCCCCCCCEEEEECCCEEEEEEECCCCEEEEHHHHHHHHCCCCCCCCCCCHHHHHH TGKRDVTLTRLEPVGNYAVQPTFSDGHDSGIFSWDYLYELGRDEQALWADYAERLAAAGV CCCCCEEEEEECCCCCEEECCCCCCCCCCCEECHHHHHHCCCCCHHHHHHHHHHHHHCCC DRDAPMAPKAGGHGCGGH CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA