| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is secA
Identifier: 222109974
GI number: 222109974
Start: 786420
End: 789173
Strand: Direct
Name: secA
Synonym: Dtpsy_0759
Alternate gene names: 222109974
Gene position: 786420-789173 (Clockwise)
Preceding gene: 222109973
Following gene: 222109975
Centisome position: 20.71
GC content: 63.51
Gene sequence:
>2754_bases ATGGCCACCAACTTCCTCACCAAAATATTCGGCAGTCGCAATGACCGCCTGCTCAAGCAGTATCGCAAGACGGTTGCTCG CATCAATGCGATGGAGCCCGACTATGAAAAGCTGAGTGACGAGGCGCTGCGGGGCAAGACGCAGGAATTCAAGGATCGCA TTGCACAGGGCGAATCGTTGGACGCTCTGCTACCCGAAGCCTTTGCCGTGGTGCGCGAGGGTTCCAAGCGCATCATGAAA ATGCGCCACTTCGACGTGCAGCTGGTGGGTGGCATGGCGCTGCATTACGGCAAGATCGCCGAGATGCGCACGGGCGAGGG CAAGACGCTGACGGCGACGCTGCCCGTTTACCTGAACGCCCTATCGGGCCAGGGCGTGCACGTGGTGACAGTGAACGACT ATCTTGCGGGCCGTGACGCGCAATGGATGGGGCGGCTGTACAACTTCCTGGGCCTCACGGTGGGTATCAACCTGCCTCAA ATGCCCCGCGAAGAAAAGCAGGCTGCCTACCAGGCGGACATCACCTACGGAACGAACAACGAGTACGGGTTCGACTACCT GCGTGACAACATGGTGTACGACGCGCGCGAGCGCGTGCAGCGCGGCCTCAACTACGCCATCGTCGATGAGGTGGACTCCA TCCTGATCGATGAGGCGCGTACCCCCCTGATCATCAGCGGCCAGGCAGAGGACCACACGGCGCTGTATGTGGCCATGAAC AAGGTGGTGCCCCTGCTGGTGCGCCAGGAGGGTGAGGCCGACCCGCGTACGGGCGAGGGCGTGACCAAACCGGGGGATTT CACCCTCGACGAAAAGACGCACCAGGTGTTCCTGACGGAGCAGGGCCACGAGAATGCAGAGCGCATCCTGGCCAGCCAGG GGCTGATTCCGGAAGGGGCGTCGCTCTACGATCCGGCCAACATCACGCTGGTGCATCACTTGTACGCGGCGCTGCGCGCC AACCATCTCTACCACCGCGACCAGCACTACGTCGTGCAGAACGGCGAGATCGTGATCGTGGACGAGTTCACGGGCCGCCT GATGGCCGGCCGCCGCTGGAGCGAAGGCCTGCACCAGGCCGTCGAAGCCAAGGAAGGCGTGAACATCCAGGCCGAGAACC AGACGCTGGCCTCCATCACCTTCCAGAACTACTTCCGCCTCTATAACAAGCTCTCGGGCATGACCGGTACGGCCGATACC GAGGCCTATGAGTTCCAGGAAATCTACGGCCTGGAAACCGTGGTGATCCCGCCCAACCGGCCCAGCAAGCGCGACGACCA GCTCGACCGCGTGTACAAGACGACGCGCGAGAAGTACGAGGCTGCGATTGCCGACATCCGAGAATGCCACGAGCGTGGCC AGCCGGTGCTGGTGGGTACCACTTCCATCGAGAACTCGGAAATCATCGACGAGTTGCTGAACAAGGCAGGCCTACCGCAC CAGGTACTCAACGCCAAGCAGCACGCGCGCGAGGCCGATATCGTGGCCCAGGCGGGACGCCCCGGCATGATCACCATCGC CACCAATATGGCGGGCCGCGGTACCGACATCGTTCTGGGCGGCAACGTGGAAAAGGCGATCGCCGCGCTGGAGGCCGATG AGTCGCTGTCAGAAGCCGAGCGAGCCGCGCGTGTGCAGGAACTGCGCGCGCAGTGGAAGCTCGACCACGAGAAGGTGACG GCACTCGGCGGCCTGCGCATCATCGCGACTGAGCGCCATGAATCCCGCCGTATCGACAACCAGCTGCGCGGCCGCTCGGG CCGTCAGGGCGACCCGGGCTCTTCGCGCTTCTATCTGAGTCTGGATGACCAATTGATGCGCATCTTCGCGGGCGACCGCG TCAAGGCCATCATGGACCGGTTGAAGATGCCCGACGGCGAAGCGATCGAGGCGGGTATTGTCACGCGCAGCATCGAGTCG GCGCAGCGCAAGGTTGAGGCGCGCAACTTCGACATCCGCAAACAGCTGCTGGAGTACGACGACGTCGCCAACGACCAGCG CAAGGTGATCTACCAGCAGCGCAATGAAATCCTGGACGCCCCCGACCTGGGCGTGTTGATCGACGCCATGCGCGACGATT GCCTGGCCGACGTGGTGCGCCAGTACGTGCCTGCCGAGTCCGTGGAAGAACAGTGGGACCTCGCAGGCCTGGAAAAGGCG CTGGCCAACGACTGGCAAGTGTCGTTGGCGCTGCAGAAAGAGGTGGAAGGCTCGGACGCCATCACCGACGAAGAGATTCT GGAGAAGGTGCAGCAGGCCGCCCGCGAGGCCTTCCTGGCCAAGGTGGGGCAGGTGGGCGCGGAGAACTTCACGCAGTTCG AGCGCATGGTGCTGCTGCAGAGCTTCGACACCAACTGGCGCGATCACCTCTCCGCGCTGGATTATTTGCGCCAGGGCATC CACCTGCGCGGCTATGCGCAGAAGCAGCCCAAGCAGGAATACAAGCGCGAGGCGTTCGAGCTCTTCCGCCAGCTGATCGA CCAGGTCAAGAACGAAGTCACGCGCCTCATGATGACCGTGCAGGTGCAATCCAGCGCCCAACTGGACGAGGCCACGCAGG CCATGGAAGACCGGGGTGAGGGCATCAGCAACGTTACCTACAGCTCGCCCACCGAGACCGGCGAAGTGGAGACGGTGGCC GATGCCGCCACCGCCGCGCAGCCTGCCGCCGCCGGCGTGCGCGTGGGCCGCAACGACCCCTGCCCCTGCGGCAGCGGTAA AAAGTACAAGCAGTGCCACGGCAAACTGGCGTGA
Upstream 100 bases:
>100_bases GTACTTGCAATGGTGGACGGGGGTCTCCATCTGGATTCACATCATCACAGGGATTCCGGTCGCTCTGCCGCTCGTTGGCG TGTAGTGCGGTCGCGTTCGC
Downstream 100 bases:
>100_bases TGCCGGCACAATGAAGAACACGGGCTGCGGCCCGTGTTCGCACTTTGGCAGTGCCTTTTCTCCTGTTTCCCCGACGTCTC TTTCTGAAGGAATACGACGC
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 917; Mature: 916
Protein sequence:
>917_residues MATNFLTKIFGSRNDRLLKQYRKTVARINAMEPDYEKLSDEALRGKTQEFKDRIAQGESLDALLPEAFAVVREGSKRIMK MRHFDVQLVGGMALHYGKIAEMRTGEGKTLTATLPVYLNALSGQGVHVVTVNDYLAGRDAQWMGRLYNFLGLTVGINLPQ MPREEKQAAYQADITYGTNNEYGFDYLRDNMVYDARERVQRGLNYAIVDEVDSILIDEARTPLIISGQAEDHTALYVAMN KVVPLLVRQEGEADPRTGEGVTKPGDFTLDEKTHQVFLTEQGHENAERILASQGLIPEGASLYDPANITLVHHLYAALRA NHLYHRDQHYVVQNGEIVIVDEFTGRLMAGRRWSEGLHQAVEAKEGVNIQAENQTLASITFQNYFRLYNKLSGMTGTADT EAYEFQEIYGLETVVIPPNRPSKRDDQLDRVYKTTREKYEAAIADIRECHERGQPVLVGTTSIENSEIIDELLNKAGLPH QVLNAKQHAREADIVAQAGRPGMITIATNMAGRGTDIVLGGNVEKAIAALEADESLSEAERAARVQELRAQWKLDHEKVT ALGGLRIIATERHESRRIDNQLRGRSGRQGDPGSSRFYLSLDDQLMRIFAGDRVKAIMDRLKMPDGEAIEAGIVTRSIES AQRKVEARNFDIRKQLLEYDDVANDQRKVIYQQRNEILDAPDLGVLIDAMRDDCLADVVRQYVPAESVEEQWDLAGLEKA LANDWQVSLALQKEVEGSDAITDEEILEKVQQAAREAFLAKVGQVGAENFTQFERMVLLQSFDTNWRDHLSALDYLRQGI HLRGYAQKQPKQEYKREAFELFRQLIDQVKNEVTRLMMTVQVQSSAQLDEATQAMEDRGEGISNVTYSSPTETGEVETVA DAATAAQPAAAGVRVGRNDPCPCGSGKKYKQCHGKLA
Sequences:
>Translated_917_residues MATNFLTKIFGSRNDRLLKQYRKTVARINAMEPDYEKLSDEALRGKTQEFKDRIAQGESLDALLPEAFAVVREGSKRIMK MRHFDVQLVGGMALHYGKIAEMRTGEGKTLTATLPVYLNALSGQGVHVVTVNDYLAGRDAQWMGRLYNFLGLTVGINLPQ MPREEKQAAYQADITYGTNNEYGFDYLRDNMVYDARERVQRGLNYAIVDEVDSILIDEARTPLIISGQAEDHTALYVAMN KVVPLLVRQEGEADPRTGEGVTKPGDFTLDEKTHQVFLTEQGHENAERILASQGLIPEGASLYDPANITLVHHLYAALRA NHLYHRDQHYVVQNGEIVIVDEFTGRLMAGRRWSEGLHQAVEAKEGVNIQAENQTLASITFQNYFRLYNKLSGMTGTADT EAYEFQEIYGLETVVIPPNRPSKRDDQLDRVYKTTREKYEAAIADIRECHERGQPVLVGTTSIENSEIIDELLNKAGLPH QVLNAKQHAREADIVAQAGRPGMITIATNMAGRGTDIVLGGNVEKAIAALEADESLSEAERAARVQELRAQWKLDHEKVT ALGGLRIIATERHESRRIDNQLRGRSGRQGDPGSSRFYLSLDDQLMRIFAGDRVKAIMDRLKMPDGEAIEAGIVTRSIES AQRKVEARNFDIRKQLLEYDDVANDQRKVIYQQRNEILDAPDLGVLIDAMRDDCLADVVRQYVPAESVEEQWDLAGLEKA LANDWQVSLALQKEVEGSDAITDEEILEKVQQAAREAFLAKVGQVGAENFTQFERMVLLQSFDTNWRDHLSALDYLRQGI HLRGYAQKQPKQEYKREAFELFRQLIDQVKNEVTRLMMTVQVQSSAQLDEATQAMEDRGEGISNVTYSSPTETGEVETVA DAATAAQPAAAGVRVGRNDPCPCGSGKKYKQCHGKLA >Mature_916_residues ATNFLTKIFGSRNDRLLKQYRKTVARINAMEPDYEKLSDEALRGKTQEFKDRIAQGESLDALLPEAFAVVREGSKRIMKM RHFDVQLVGGMALHYGKIAEMRTGEGKTLTATLPVYLNALSGQGVHVVTVNDYLAGRDAQWMGRLYNFLGLTVGINLPQM PREEKQAAYQADITYGTNNEYGFDYLRDNMVYDARERVQRGLNYAIVDEVDSILIDEARTPLIISGQAEDHTALYVAMNK VVPLLVRQEGEADPRTGEGVTKPGDFTLDEKTHQVFLTEQGHENAERILASQGLIPEGASLYDPANITLVHHLYAALRAN HLYHRDQHYVVQNGEIVIVDEFTGRLMAGRRWSEGLHQAVEAKEGVNIQAENQTLASITFQNYFRLYNKLSGMTGTADTE AYEFQEIYGLETVVIPPNRPSKRDDQLDRVYKTTREKYEAAIADIRECHERGQPVLVGTTSIENSEIIDELLNKAGLPHQ VLNAKQHAREADIVAQAGRPGMITIATNMAGRGTDIVLGGNVEKAIAALEADESLSEAERAARVQELRAQWKLDHEKVTA LGGLRIIATERHESRRIDNQLRGRSGRQGDPGSSRFYLSLDDQLMRIFAGDRVKAIMDRLKMPDGEAIEAGIVTRSIESA QRKVEARNFDIRKQLLEYDDVANDQRKVIYQQRNEILDAPDLGVLIDAMRDDCLADVVRQYVPAESVEEQWDLAGLEKAL ANDWQVSLALQKEVEGSDAITDEEILEKVQQAAREAFLAKVGQVGAENFTQFERMVLLQSFDTNWRDHLSALDYLRQGIH LRGYAQKQPKQEYKREAFELFRQLIDQVKNEVTRLMMTVQVQSSAQLDEATQAMEDRGEGISNVTYSSPTETGEVETVAD AATAAQPAAAGVRVGRNDPCPCGSGKKYKQCHGKLA
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the pr
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity)
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family
Homologues:
Organism=Escherichia coli, GI1786287, Length=916, Percent_Identity=59.2794759825327, Blast_Score=1078, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SECA_ACIET (B9MDY4)
Other databases:
- EMBL: CP001392 - RefSeq: YP_002552238.1 - GeneID: 7383698 - GenomeReviews: CP001392_GR - KEGG: dia:Dtpsy_0759 - ProtClustDB: PRK12904 - GO: GO:0005737 - HAMAP: MF_01382 - InterPro: IPR004027 - InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 - Gene3D: G3DSA:1.10.3060.10 - PRINTS: PR00906 - SMART: SM00957 - SMART: SM00958 - TIGRFAMs: TIGR00963
Pfam domain/function: PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW; SSF81767 SecA_PP_bd; SSF81886 SecA_SW
EC number: NA
Molecular weight: Translated: 102702; Mature: 102571
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS01312 SECA; PS51196 SECA_MOTOR_DEAD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATNFLTKIFGSRNDRLLKQYRKTVARINAMEPDYEKLSDEALRGKTQEFKDRIAQGESL CCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCH DALLPEAFAVVREGSKRIMKMRHFDVQLVGGMALHYGKIAEMRTGEGKTLTATLPVYLNA HHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHEECCCCCEEEEEHHHHHHH LSGQGVHVVTVNDYLAGRDAQWMGRLYNFLGLTVGINLPQMPREEKQAAYQADITYGTNN CCCCCEEEEEECHHHCCCCHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHEEEEECCCC EYGFDYLRDNMVYDARERVQRGLNYAIVDEVDSILIDEARTPLIISGQAEDHTALYVAMN CCCHHHHHHCHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEHH KVVPLLVRQEGEADPRTGEGVTKPGDFTLDEKTHQVFLTEQGHENAERILASQGLIPEGA HHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCC SLYDPANITLVHHLYAALRANHLYHRDQHYVVQNGEIVIVDEFTGRLMAGRRWSEGLHQA CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCHHHCCCHHHHHHHHH VEAKEGVNIQAENQTLASITFQNYFRLYNKLSGMTGTADTEAYEFQEIYGLETVVIPPNR HHHHCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEECCCC PSKRDDQLDRVYKTTREKYEAAIADIRECHERGQPVLVGTTSIENSEIIDELLNKAGLPH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCH QVLNAKQHAREADIVAQAGRPGMITIATNMAGRGTDIVLGGNVEKAIAALEADESLSEAE HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCHHHHHHHHHCCHHHHHHH RAARVQELRAQWKLDHEKVTALGGLRIIATERHESRRIDNQLRGRSGRQGDPGSSRFYLS HHHHHHHHHHHHCCCHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCEEEEE LDDQLMRIFAGDRVKAIMDRLKMPDGEAIEAGIVTRSIESAQRKVEARNFDIRKQLLEYD HHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH DVANDQRKVIYQQRNEILDAPDLGVLIDAMRDDCLADVVRQYVPAESVEEQWDLAGLEKA HCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LANDWQVSLALQKEVEGSDAITDEEILEKVQQAAREAFLAKVGQVGAENFTQFERMVLLQ HCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH SFDTNWRDHLSALDYLRQGIHLRGYAQKQPKQEYKREAFELFRQLIDQVKNEVTRLMMTV HCCCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE QVQSSAQLDEATQAMEDRGEGISNVTYSSPTETGEVETVADAATAAQPAAAGVRVGRNDP EECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCCC CPCGSGKKYKQCHGKLA CCCCCCCHHHHHCCCCC >Mature Secondary Structure ATNFLTKIFGSRNDRLLKQYRKTVARINAMEPDYEKLSDEALRGKTQEFKDRIAQGESL CHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCH DALLPEAFAVVREGSKRIMKMRHFDVQLVGGMALHYGKIAEMRTGEGKTLTATLPVYLNA HHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHEECCCCCEEEEEHHHHHHH LSGQGVHVVTVNDYLAGRDAQWMGRLYNFLGLTVGINLPQMPREEKQAAYQADITYGTNN CCCCCEEEEEECHHHCCCCHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHEEEEECCCC EYGFDYLRDNMVYDARERVQRGLNYAIVDEVDSILIDEARTPLIISGQAEDHTALYVAMN CCCHHHHHHCHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEHH KVVPLLVRQEGEADPRTGEGVTKPGDFTLDEKTHQVFLTEQGHENAERILASQGLIPEGA HHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCC SLYDPANITLVHHLYAALRANHLYHRDQHYVVQNGEIVIVDEFTGRLMAGRRWSEGLHQA CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCHHHCCCHHHHHHHHH VEAKEGVNIQAENQTLASITFQNYFRLYNKLSGMTGTADTEAYEFQEIYGLETVVIPPNR HHHHCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEECCCC PSKRDDQLDRVYKTTREKYEAAIADIRECHERGQPVLVGTTSIENSEIIDELLNKAGLPH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCH QVLNAKQHAREADIVAQAGRPGMITIATNMAGRGTDIVLGGNVEKAIAALEADESLSEAE HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCHHHHHHHHHCCHHHHHHH RAARVQELRAQWKLDHEKVTALGGLRIIATERHESRRIDNQLRGRSGRQGDPGSSRFYLS HHHHHHHHHHHHCCCHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCEEEEE LDDQLMRIFAGDRVKAIMDRLKMPDGEAIEAGIVTRSIESAQRKVEARNFDIRKQLLEYD HHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH DVANDQRKVIYQQRNEILDAPDLGVLIDAMRDDCLADVVRQYVPAESVEEQWDLAGLEKA HCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LANDWQVSLALQKEVEGSDAITDEEILEKVQQAAREAFLAKVGQVGAENFTQFERMVLLQ HCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH SFDTNWRDHLSALDYLRQGIHLRGYAQKQPKQEYKREAFELFRQLIDQVKNEVTRLMMTV HCCCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE QVQSSAQLDEATQAMEDRGEGISNVTYSSPTETGEVETVADAATAAQPAAAGVRVGRNDP EECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCCC CPCGSGKKYKQCHGKLA CCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA