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The map label for this gene is petB [H]

Identifier: 222109968

GI number: 222109968

Start: 781280

End: 782701

Strand: Direct

Name: petB [H]

Synonym: Dtpsy_0753

Alternate gene names: 222109968

Gene position: 781280-782701 (Clockwise)

Preceding gene: 222109967

Following gene: 222109969

Centisome position: 20.58

GC content: 60.55

Gene sequence:

>1422_bases
ATGGCTGCTTATCGCGAATTCAAGGAAGTCTCGCCCAACGCGTCCGCGGGCGTGAAAGTCACCAACTGGCTGGAAAACCG
TTTCCCCACGGCTTTCGATGCCTACAAGGTGCACATGTCGGAGTACTACGCTCCGAAGAACTTCAACTTCTGGTACATCT
TCGGCTCGCTGGCCCTGCTGGTACTGGTGATCCAGATCGTCACCGGCATCTTCCTCGTGATGCACTACAAGCCCGACGCT
GCCAAGGCGTTCGAGTCTGTCGAGTACATCATGCGCGATGTGCCGTGGGGCTGGCTGATCCGCTACATGCACTCGACCGG
TGCGTCGGCTTTCTTCGTGGTCGTGTACCTGCATATGTTCCGCGGCCTGCTGTACGGCTCCTACCGCAAGCCACGCGAAC
TGGTGTGGATCTTCGGCTGCGCCATCTTCCTGGCGCTGATGGCCGAGGCGTTCATGGGCTATCTGCTGCCCTGGGGTCAG
ATGTCCTACTGGGGCGCACAGGTGATCGTGAACCTGTTCTCCGCCATTCCCTTCATCGGCCCCGATCTGGCGCTGCTGAT
CCGTGGCGACTATGTGGTGGGCGATGCGACGCTGAACCGCTTCTTCAGCTTCCACGTGATCGCTGTGCCGCTGGTGCTGC
TGGGCCTGGTGGTGGCGCACTTGCTGGCGCTGCATGACGTAGGCTCCAACAACCCTGATGGCATCGAAATCAAGGGCCCC
GGCAAGCCGGTGGATGAGCATGGTCACCCGCTGGACGGCGTACCTTTCCACCCCTACTACACGGTGCACGACATCCTGGG
CGTGTGTGTGTTCCTGTTCATCTTCTCGGCGGTGGTGTTCTTCGCTCCCGAACTGGGTGGCTACTTCCTGGAGTACAACA
ACTTCATCCCGGCCGATCCGCTGCAGACGCCTGCCCACATCGCCCCGGTGTGGTACTTCACGCCCTTCTATTCCATGCTG
CGCGCCATCACCACCGAGATGATGTACGTGTTGATCGCATGTGTGGTGCTGGGTGCGGGCTTCGGTGTATTCAAGGCCCG
TTTGCCTGCGCTCATCAAGGGTGGCGTAGCGCTGGCAGCCGCCGTGGCCATCGCCCTCATGCTGGCTATTGACGCCAAGT
TTTGGGGCGTGGTGGTGATGGGTGGTGCCGTGATCATTCTGTTCTTCCTGCCCTGGCTGGACCAGAGCCCGGCACGCTCG
ATCCGCTATCGCCCGACCTGGCACAAGTACCTGTACGCAGTATTCGTGGTTGTGTTCGTCATCCTGGCCTACCTGGGTGT
GCAACCGCCATCGCCCATCGGCGAGCGGGTTTCGCAAGTGGGTACGCTGTTCTACTTTGGTTTCTTCCTGCTCATGCCCT
GGTGGAGCCGCTTGGGTACACCCAAGCCTGTGCCGGACCGCGTGACTTTTGCTGCGCACTGA

Upstream 100 bases:

>100_bases
GCCTGCGCCTGACAATCTCGAAGTGCCGCCGCACATGTACCTGTCGGAGACCAAGCTCCTGATCGGTGAAGACAAGAAGG
CCTGAGGGAGGCACTGACAA

Downstream 100 bases:

>100_bases
GCTGGAGACGACAACAATGAAAAAACTCATCCTCACGTTGGTTGCAGCTCTGGGTCTGGTGGCTGGGGCGCATGCCGCCG
GTGGTGGCATGGCCTGGGAC

Product: cytochrome b/b6 domain-containing protein

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MAAYREFKEVSPNASAGVKVTNWLENRFPTAFDAYKVHMSEYYAPKNFNFWYIFGSLALLVLVIQIVTGIFLVMHYKPDA
AKAFESVEYIMRDVPWGWLIRYMHSTGASAFFVVVYLHMFRGLLYGSYRKPRELVWIFGCAIFLALMAEAFMGYLLPWGQ
MSYWGAQVIVNLFSAIPFIGPDLALLIRGDYVVGDATLNRFFSFHVIAVPLVLLGLVVAHLLALHDVGSNNPDGIEIKGP
GKPVDEHGHPLDGVPFHPYYTVHDILGVCVFLFIFSAVVFFAPELGGYFLEYNNFIPADPLQTPAHIAPVWYFTPFYSML
RAITTEMMYVLIACVVLGAGFGVFKARLPALIKGGVALAAAVAIALMLAIDAKFWGVVVMGGAVIILFFLPWLDQSPARS
IRYRPTWHKYLYAVFVVVFVILAYLGVQPPSPIGERVSQVGTLFYFGFFLLMPWWSRLGTPKPVPDRVTFAAH

Sequences:

>Translated_473_residues
MAAYREFKEVSPNASAGVKVTNWLENRFPTAFDAYKVHMSEYYAPKNFNFWYIFGSLALLVLVIQIVTGIFLVMHYKPDA
AKAFESVEYIMRDVPWGWLIRYMHSTGASAFFVVVYLHMFRGLLYGSYRKPRELVWIFGCAIFLALMAEAFMGYLLPWGQ
MSYWGAQVIVNLFSAIPFIGPDLALLIRGDYVVGDATLNRFFSFHVIAVPLVLLGLVVAHLLALHDVGSNNPDGIEIKGP
GKPVDEHGHPLDGVPFHPYYTVHDILGVCVFLFIFSAVVFFAPELGGYFLEYNNFIPADPLQTPAHIAPVWYFTPFYSML
RAITTEMMYVLIACVVLGAGFGVFKARLPALIKGGVALAAAVAIALMLAIDAKFWGVVVMGGAVIILFFLPWLDQSPARS
IRYRPTWHKYLYAVFVVVFVILAYLGVQPPSPIGERVSQVGTLFYFGFFLLMPWWSRLGTPKPVPDRVTFAAH
>Mature_472_residues
AAYREFKEVSPNASAGVKVTNWLENRFPTAFDAYKVHMSEYYAPKNFNFWYIFGSLALLVLVIQIVTGIFLVMHYKPDAA
KAFESVEYIMRDVPWGWLIRYMHSTGASAFFVVVYLHMFRGLLYGSYRKPRELVWIFGCAIFLALMAEAFMGYLLPWGQM
SYWGAQVIVNLFSAIPFIGPDLALLIRGDYVVGDATLNRFFSFHVIAVPLVLLGLVVAHLLALHDVGSNNPDGIEIKGPG
KPVDEHGHPLDGVPFHPYYTVHDILGVCVFLFIFSAVVFFAPELGGYFLEYNNFIPADPLQTPAHIAPVWYFTPFYSMLR
AITTEMMYVLIACVVLGAGFGVFKARLPALIKGGVALAAAVAIALMLAIDAKFWGVVVMGGAVIILFFLPWLDQSPARSI
RYRPTWHKYLYAVFVVVFVILAYLGVQPPSPIGERVSQVGTLFYFGFFLLMPWWSRLGTPKPVPDRVTFAAH

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=411, Percent_Identity=39.6593673965937, Blast_Score=254, Evalue=1e-67,
Organism=Saccharomyces cerevisiae, GI6226529, Length=408, Percent_Identity=37.7450980392157, Blast_Score=243, Evalue=4e-65,
Organism=Saccharomyces cerevisiae, GI6226532, Length=244, Percent_Identity=46.3114754098361, Blast_Score=208, Evalue=1e-54,
Organism=Saccharomyces cerevisiae, GI6226531, Length=152, Percent_Identity=53.2894736842105, Blast_Score=154, Evalue=3e-38,
Organism=Saccharomyces cerevisiae, GI6226530, Length=137, Percent_Identity=51.0948905109489, Blast_Score=130, Evalue=6e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.2

Molecular weight: Translated: 53054; Mature: 52923

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AAYREFKEVSPNASAGVKVTNWLENRFPTAFDAYKVHMSEYYAPKNFNFWYIFGSLALL
CCHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHH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HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA