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The map label for this gene is ycfF [C]

Identifier: 222109958

GI number: 222109958

Start: 773169

End: 773528

Strand: Direct

Name: ycfF [C]

Synonym: Dtpsy_0743

Alternate gene names: 222109958

Gene position: 773169-773528 (Clockwise)

Preceding gene: 222109957

Following gene: 222109959

Centisome position: 20.36

GC content: 63.33

Gene sequence:

>360_bases
ATGCAGCACGACCCGAACTGCCTCTTCTGCAAGATCATCGCCGGCCAGATCCCCTCGAAGAAGGTGTACGAGGACGAGCG
GGTGTTTGCCTTCCACGACATCCACCCGTGGGCGCCGGTGCATTTTCTCGTGGTGCCCAAGGTCCATCTGCATTCCATGG
CGGCGGTCACGCCCGAGCACGCGGACCTGCTGGGGCACATGATGACGCTGGCGCCCAAGCTGGCGCAGGAGCAGGGCTGC
AACCCTTATCCGGACGGAGGATTCCGTATCGTGGTAAATACCGGTTCCGAGGGCGGCCAGGAGATCCACCACCTGCACAT
GCACGTGATCGGCGGTCCCCGTCCCTGGCTCAAGGGGTAA

Upstream 100 bases:

>100_bases
GCAGGCCCACCGGGCGGACGTGGGCGTGCGCACCACGGTCAACATCGCCGACAATGCGTGACCTTTCCACTGCCTGTTGA
CCGCCTTTTCGCCCTCCGCC

Downstream 100 bases:

>100_bases
GTTGGCACGCCTGCAGCCGCCGTGAAGTTGCTAGGGATATGAGGGGCCCGACATATCCGCCGTCTAGAATGGGCCGTATT
CGTTAGGAGATTTTCATGGG

Product: histidine triad (hit) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MQHDPNCLFCKIIAGQIPSKKVYEDERVFAFHDIHPWAPVHFLVVPKVHLHSMAAVTPEHADLLGHMMTLAPKLAQEQGC
NPYPDGGFRIVVNTGSEGGQEIHHLHMHVIGGPRPWLKG

Sequences:

>Translated_119_residues
MQHDPNCLFCKIIAGQIPSKKVYEDERVFAFHDIHPWAPVHFLVVPKVHLHSMAAVTPEHADLLGHMMTLAPKLAQEQGC
NPYPDGGFRIVVNTGSEGGQEIHHLHMHVIGGPRPWLKG
>Mature_119_residues
MQHDPNCLFCKIIAGQIPSKKVYEDERVFAFHDIHPWAPVHFLVVPKVHLHSMAAVTPEHADLLGHMMTLAPKLAQEQGC
NPYPDGGFRIVVNTGSEGGQEIHHLHMHVIGGPRPWLKG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=107, Percent_Identity=46.7289719626168, Blast_Score=110, Evalue=2e-25,
Organism=Homo sapiens, GI14211923, Length=106, Percent_Identity=37.7358490566038, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1787346, Length=111, Percent_Identity=43.2432432432432, Blast_Score=95, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17506713, Length=107, Percent_Identity=42.9906542056075, Blast_Score=103, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6320078, Length=107, Percent_Identity=35.5140186915888, Blast_Score=67, Evalue=5e-13,
Organism=Drosophila melanogaster, GI28574010, Length=107, Percent_Identity=41.1214953271028, Blast_Score=97, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24581222, Length=107, Percent_Identity=41.1214953271028, Blast_Score=97, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 13266; Mature: 13266

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHDPNCLFCKIIAGQIPSKKVYEDERVFAFHDIHPWAPVHFLVVPKVHLHSMAAVTPEH
CCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCHHHHHHHHCCCCH
ADLLGHMMTLAPKLAQEQGCNPYPDGGFRIVVNTGSEGGQEIHHLHMHVIGGPRPWLKG
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MQHDPNCLFCKIIAGQIPSKKVYEDERVFAFHDIHPWAPVHFLVVPKVHLHSMAAVTPEH
CCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCHHHHHHHHCCCCH
ADLLGHMMTLAPKLAQEQGCNPYPDGGFRIVVNTGSEGGQEIHHLHMHVIGGPRPWLKG
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]