| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is hisA [H]
Identifier: 222109947
GI number: 222109947
Start: 761914
End: 762657
Strand: Direct
Name: hisA [H]
Synonym: Dtpsy_0732
Alternate gene names: 222109947
Gene position: 761914-762657 (Clockwise)
Preceding gene: 222109946
Following gene: 222109952
Centisome position: 20.07
GC content: 66.26
Gene sequence:
>744_bases ATGCTGCTCATCCCCGCCATCGACCTCAAGGACGGCCACTGCGTACGCCTCAAGCAAGGTGACATGGACCAATCGACCAC CTTTGGCGAAGACCCCGCCGCCATGGCCCGCAAGTGGGCGGATGCGGGCGCGCGCCGCCTGCACCTGGTGGACCTGAACG GCGCGTTTGCCGGCCAGCCCAAGAACAAGGCGGCCATCAAGGCCATCCTGGCCGAGGTGGGCGCCGACATTCCGGTGCAG TTGGGCGGCGGCATCCGCGACTTGGACACCATCGAGCGCTACATCGACGCCGGGCTGCGGTACGTCATCATCGGCACGGC CGCGGTGAAGAACCCCGGCTTCCTCAAGGATGCGTGCAGCGCGTTTGGCGGCCACATCATCGTGGGCCTGGACGCCAAGG ACGGCAAGGTGGCCACCGACGGCTGGAGCAAGCTCACCGGCCACGAGGTGGTTGATCTGGCGCGCAAGTTCCAGGACTGG GGCGTGGAATCCATCATCTACACCGACATCGGCCGCGACGGCATGCTCTCGGGCATCAATATCGAGGCTACGGTGAAGCT GGCCCAGGCCCTCACCATCCCAGTGATCGCCTCGGGCGGCCTGGCCGGCATCGCGGACATCGAGAAGCTCTGCGAAGTCG AAAACGAAGGCGTGGAAGGCGTCATCTGCGGGCGCGCGATCTATTCCGGCGACCTGGATTTCGCAGCCGCGCAGCATCGC GCCGACGAGCTGAGCCTGGCCTGA
Upstream 100 bases:
>100_bases GGCCTGGCGCTGTACCGCAACTTCTTGCACTGGAAGCCCTGATTCTTCAACCCGGCAGGGCCGGGCCTTGTGCGGCTCGC CCCATTCCCCGCTCACCATC
Downstream 100 bases:
>100_bases GCCCGGGCGGCCTGGTGCCTTCACCCGGCGGCGTATGCGGCCGGGTCAGAACCAGCGGCTGGCCACCCAGTCGAAACGCA CATCCAGCGGCAATTGGTGG
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [H]
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MLLIPAIDLKDGHCVRLKQGDMDQSTTFGEDPAAMARKWADAGARRLHLVDLNGAFAGQPKNKAAIKAILAEVGADIPVQ LGGGIRDLDTIERYIDAGLRYVIIGTAAVKNPGFLKDACSAFGGHIIVGLDAKDGKVATDGWSKLTGHEVVDLARKFQDW GVESIIYTDIGRDGMLSGINIEATVKLAQALTIPVIASGGLAGIADIEKLCEVENEGVEGVICGRAIYSGDLDFAAAQHR ADELSLA
Sequences:
>Translated_247_residues MLLIPAIDLKDGHCVRLKQGDMDQSTTFGEDPAAMARKWADAGARRLHLVDLNGAFAGQPKNKAAIKAILAEVGADIPVQ LGGGIRDLDTIERYIDAGLRYVIIGTAAVKNPGFLKDACSAFGGHIIVGLDAKDGKVATDGWSKLTGHEVVDLARKFQDW GVESIIYTDIGRDGMLSGINIEATVKLAQALTIPVIASGGLAGIADIEKLCEVENEGVEGVICGRAIYSGDLDFAAAQHR ADELSLA >Mature_247_residues MLLIPAIDLKDGHCVRLKQGDMDQSTTFGEDPAAMARKWADAGARRLHLVDLNGAFAGQPKNKAAIKAILAEVGADIPVQ LGGGIRDLDTIERYIDAGLRYVIIGTAAVKNPGFLKDACSAFGGHIIVGLDAKDGKVATDGWSKLTGHEVVDLARKFQDW GVESIIYTDIGRDGMLSGINIEATVKLAQALTIPVIASGGLAGIADIEKLCEVENEGVEGVICGRAIYSGDLDFAAAQHR ADELSLA
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI87082028, Length=242, Percent_Identity=33.8842975206612, Blast_Score=133, Evalue=9e-33, Organism=Escherichia coli, GI1788336, Length=209, Percent_Identity=26.7942583732057, Blast_Score=75, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: =5.3.1.16 [H]
Molecular weight: Translated: 26021; Mature: 26021
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLIPAIDLKDGHCVRLKQGDMDQSTTFGEDPAAMARKWADAGARRLHLVDLNGAFAGQP CEEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCC KNKAAIKAILAEVGADIPVQLGGGIRDLDTIERYIDAGLRYVIIGTAAVKNPGFLKDACS CHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHH AFGGHIIVGLDAKDGKVATDGWSKLTGHEVVDLARKFQDWGVESIIYTDIGRDGMLSGIN HCCCEEEEEEECCCCEEECCCCHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC IEATVKLAQALTIPVIASGGLAGIADIEKLCEVENEGVEGVICGRAIYSGDLDFAAAQHR HHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEECCEEECCCCCHHHHHHC ADELSLA CHHCCCC >Mature Secondary Structure MLLIPAIDLKDGHCVRLKQGDMDQSTTFGEDPAAMARKWADAGARRLHLVDLNGAFAGQP CEEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCC KNKAAIKAILAEVGADIPVQLGGGIRDLDTIERYIDAGLRYVIIGTAAVKNPGFLKDACS CHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHH AFGGHIIVGLDAKDGKVATDGWSKLTGHEVVDLARKFQDWGVESIIYTDIGRDGMLSGIN HCCCEEEEEEECCCCEEECCCCHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC IEATVKLAQALTIPVIASGGLAGIADIEKLCEVENEGVEGVICGRAIYSGDLDFAAAQHR HHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEECCEEECCCCCHHHHHHC ADELSLA CHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA