| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is yrbA [C]
Identifier: 222109939
GI number: 222109939
Start: 754573
End: 754821
Strand: Direct
Name: yrbA [C]
Synonym: Dtpsy_0724
Alternate gene names: 222109939
Gene position: 754573-754821 (Clockwise)
Preceding gene: 222109938
Following gene: 222109940
Centisome position: 19.88
GC content: 65.46
Gene sequence:
>249_bases ATGACTGCAGACCAACTCAAGGACATCATCAGCGCGGGCATGGCCTGCGACCACATCACGCTGGAGGGCGACGGCCGCCA CTGGTACGCCACCATCGTGTCGTCCGAGTTCGAGGGCAAGCGCTCCATCCAGCGCCACCAGCGTGTCTACGCCACACTGG GCGCACGCATGCAGTCGGACGAGGTGCATGCGTTGTCCATGAAGACCTTTACCCCCGCCGAGTGGGCGCAGGCCCAGGCG GGCGACTGA
Upstream 100 bases:
>100_bases TCCCCCTGGCTCAGCCTGGGCGTCGTCGGCCTGGCATGGGCGCTGGTCAGCCTGCTGGCGCTGCACCTGCTGCGCACGGG CTACAAAATCAGGAACTGAC
Downstream 100 bases:
>100_bases TACGGCCCCGTCCTTCGCAAGATGGCCGTGCGGCCGGGACCGTGCCCCGGCGCGGGGGCGGCACGGGCGTCATGCCCCGG TCCTCGCCGGTGGATGGGCG
Product: bola family protein
Products: NA
Alternate protein names: BolA-Like Protein; BolA Family Transcriptional Regulator; BolA Protein; BolA/YrbA Family Protein Transcriptional Regulator; BolA-Like Cell Cycle Protein; Bola Family Protein; BolA/YrbA Family Protein
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MTADQLKDIISAGMACDHITLEGDGRHWYATIVSSEFEGKRSIQRHQRVYATLGARMQSDEVHALSMKTFTPAEWAQAQA GD
Sequences:
>Translated_82_residues MTADQLKDIISAGMACDHITLEGDGRHWYATIVSSEFEGKRSIQRHQRVYATLGARMQSDEVHALSMKTFTPAEWAQAQA GD >Mature_81_residues TADQLKDIISAGMACDHITLEGDGRHWYATIVSSEFEGKRSIQRHQRVYATLGARMQSDEVHALSMKTFTPAEWAQAQAG D
Specific function: Unknown
COG id: COG5007
COG function: function code K; Predicted transcriptional regulator, BolA superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9124; Mature: 8993
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADQLKDIISAGMACDHITLEGDGRHWYATIVSSEFEGKRSIQRHQRVYATLGARMQSD CCHHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC EVHALSMKTFTPAEWAQAQAGD CEEEEEECCCCCHHHCCCCCCC >Mature Secondary Structure TADQLKDIISAGMACDHITLEGDGRHWYATIVSSEFEGKRSIQRHQRVYATLGARMQSD CHHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC EVHALSMKTFTPAEWAQAQAGD CEEEEEECCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA