Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is yrbA [C]

Identifier: 222109939

GI number: 222109939

Start: 754573

End: 754821

Strand: Direct

Name: yrbA [C]

Synonym: Dtpsy_0724

Alternate gene names: 222109939

Gene position: 754573-754821 (Clockwise)

Preceding gene: 222109938

Following gene: 222109940

Centisome position: 19.88

GC content: 65.46

Gene sequence:

>249_bases
ATGACTGCAGACCAACTCAAGGACATCATCAGCGCGGGCATGGCCTGCGACCACATCACGCTGGAGGGCGACGGCCGCCA
CTGGTACGCCACCATCGTGTCGTCCGAGTTCGAGGGCAAGCGCTCCATCCAGCGCCACCAGCGTGTCTACGCCACACTGG
GCGCACGCATGCAGTCGGACGAGGTGCATGCGTTGTCCATGAAGACCTTTACCCCCGCCGAGTGGGCGCAGGCCCAGGCG
GGCGACTGA

Upstream 100 bases:

>100_bases
TCCCCCTGGCTCAGCCTGGGCGTCGTCGGCCTGGCATGGGCGCTGGTCAGCCTGCTGGCGCTGCACCTGCTGCGCACGGG
CTACAAAATCAGGAACTGAC

Downstream 100 bases:

>100_bases
TACGGCCCCGTCCTTCGCAAGATGGCCGTGCGGCCGGGACCGTGCCCCGGCGCGGGGGCGGCACGGGCGTCATGCCCCGG
TCCTCGCCGGTGGATGGGCG

Product: bola family protein

Products: NA

Alternate protein names: BolA-Like Protein; BolA Family Transcriptional Regulator; BolA Protein; BolA/YrbA Family Protein Transcriptional Regulator; BolA-Like Cell Cycle Protein; Bola Family Protein; BolA/YrbA Family Protein

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MTADQLKDIISAGMACDHITLEGDGRHWYATIVSSEFEGKRSIQRHQRVYATLGARMQSDEVHALSMKTFTPAEWAQAQA
GD

Sequences:

>Translated_82_residues
MTADQLKDIISAGMACDHITLEGDGRHWYATIVSSEFEGKRSIQRHQRVYATLGARMQSDEVHALSMKTFTPAEWAQAQA
GD
>Mature_81_residues
TADQLKDIISAGMACDHITLEGDGRHWYATIVSSEFEGKRSIQRHQRVYATLGARMQSDEVHALSMKTFTPAEWAQAQAG
D

Specific function: Unknown

COG id: COG5007

COG function: function code K; Predicted transcriptional regulator, BolA superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9124; Mature: 8993

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTADQLKDIISAGMACDHITLEGDGRHWYATIVSSEFEGKRSIQRHQRVYATLGARMQSD
CCHHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC
EVHALSMKTFTPAEWAQAQAGD
CEEEEEECCCCCHHHCCCCCCC
>Mature Secondary Structure 
TADQLKDIISAGMACDHITLEGDGRHWYATIVSSEFEGKRSIQRHQRVYATLGARMQSD
CHHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC
EVHALSMKTFTPAEWAQAQAGD
CEEEEEECCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA