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The map label for this gene is yadH [H]

Identifier: 222109938

GI number: 222109938

Start: 753816

End: 754571

Strand: Direct

Name: yadH [H]

Synonym: Dtpsy_0723

Alternate gene names: 222109938

Gene position: 753816-754571 (Clockwise)

Preceding gene: 222109937

Following gene: 222109939

Centisome position: 19.86

GC content: 64.02

Gene sequence:

>756_bases
ATGATCGGCTGGCAGACCCTGTTCTACAAGGAAGTGCTGCGCTTTTGGAAGGTGGGCTTCCAGACCGTGGCGGCGCCGGT
GCTCACGGCGGTGCTGTACCTGCTGATCTTCGGCCATGTGCTCGAAGACCATGTCAAGGTCTATGACCGGCTGAGCTACA
CCGCCTTCCTGGTGCCCGGCCTGGTGATGATGAGCGTGCTGCAGAACGCCTTTGCCAACAGCTCGTCCAGCCTGATCCAG
AGCAAGATCATGGGCAGTCTGGTGTTCGTGCTGCTCACGCCGCTGTCGCACCGTGCCTGGTTCGCGGCCTACGTGGGCTC
GTCCATGGTGCGCGGCCTGGTGGTGGGCCTGGGTGTGTTCATCGTCACGCTGGCGTTCGCCACGCCGCAGTTCGCCGCGC
CGCTGTGGATTCTTGCGTTCGCGCTGCTGGGCGCGGCGCTGCTGGCCACGCTCGGGGTCATCGCGGGACTGTGGGCCGAC
AAGTTCGACCAGATGGCGGCATTCCAGAACTTCATCATCGTGCCCATGACCTTCCTGTCGGGCGTGTTCTATTCGGTGCA
ATCGCTGCCGCCGTTCTGGCAGGGCGCAAGCCACCTGAACCCGTTCTTCTACATGATCGACGGCTTCCGCTACGGCTTCT
TCGGCGTGAGCGACGTCTCCCCCTGGCTCAGCCTGGGCGTCGTCGGCCTGGCATGGGCGCTGGTCAGCCTGCTGGCGCTG
CACCTGCTGCGCACGGGCTACAAAATCAGGAACTGA

Upstream 100 bases:

>100_bases
TGCGCGCCGCCGGCGTGCGCGTGGAGGATGTGGAGATCCGCAAGGCCGACCTGGAGGATGTGTTCCTCAACGTCATGGCG
GCCGAGCAGGAGGAGCACGC

Downstream 100 bases:

>100_bases
CATGACTGCAGACCAACTCAAGGACATCATCAGCGCGGGCATGGCCTGCGACCACATCACGCTGGAGGGCGACGGCCGCC
ACTGGTACGCCACCATCGTG

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MIGWQTLFYKEVLRFWKVGFQTVAAPVLTAVLYLLIFGHVLEDHVKVYDRLSYTAFLVPGLVMMSVLQNAFANSSSSLIQ
SKIMGSLVFVLLTPLSHRAWFAAYVGSSMVRGLVVGLGVFIVTLAFATPQFAAPLWILAFALLGAALLATLGVIAGLWAD
KFDQMAAFQNFIIVPMTFLSGVFYSVQSLPPFWQGASHLNPFFYMIDGFRYGFFGVSDVSPWLSLGVVGLAWALVSLLAL
HLLRTGYKIRN

Sequences:

>Translated_251_residues
MIGWQTLFYKEVLRFWKVGFQTVAAPVLTAVLYLLIFGHVLEDHVKVYDRLSYTAFLVPGLVMMSVLQNAFANSSSSLIQ
SKIMGSLVFVLLTPLSHRAWFAAYVGSSMVRGLVVGLGVFIVTLAFATPQFAAPLWILAFALLGAALLATLGVIAGLWAD
KFDQMAAFQNFIIVPMTFLSGVFYSVQSLPPFWQGASHLNPFFYMIDGFRYGFFGVSDVSPWLSLGVVGLAWALVSLLAL
HLLRTGYKIRN
>Mature_251_residues
MIGWQTLFYKEVLRFWKVGFQTVAAPVLTAVLYLLIFGHVLEDHVKVYDRLSYTAFLVPGLVMMSVLQNAFANSSSSLIQ
SKIMGSLVFVLLTPLSHRAWFAAYVGSSMVRGLVVGLGVFIVTLAFATPQFAAPLWILAFALLGAALLATLGVIAGLWAD
KFDQMAAFQNFIIVPMTFLSGVFYSVQSLPPFWQGASHLNPFFYMIDGFRYGFFGVSDVSPWLSLGVVGLAWALVSLLAL
HLLRTGYKIRN

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=247, Percent_Identity=38.0566801619433, Blast_Score=175, Evalue=3e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 27691; Mature: 27691

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCCC
>Mature Secondary Structure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HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]