| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109923
Identifier: 222109923
GI number: 222109923
Start: 736983
End: 737684
Strand: Direct
Name: 222109923
Synonym: Dtpsy_0708
Alternate gene names: NA
Gene position: 736983-737684 (Clockwise)
Preceding gene: 222109922
Following gene: 222109924
Centisome position: 19.41
GC content: 67.38
Gene sequence:
>702_bases ATGGCCCGCCTTCCCCGCCTCGCCCTCGCTGGCTACCCGCACCACATCATCCAGCGTGGCAACAACCGCCAGCCGATCTT CCTGGATGCCGCGGACCGGGAGCTCATGTGGTCGTTGCTGGTCGAGCATGCGCGGCAGCAGCAGGTGGCGGTGCACGCCT ATGTGCTCATGGACAACCATTTCCACCTGCTGGCCACGCCGCAGGAGGGCAAATCGCTGCCTCTGATGATGCAAGCCGTG GGGCGCAGCTATGTGCGGCGCTTCAACCAGCGCCATGGGCGTTCGGGCACGCTATGGGAAGGGCGCTACCGCAGCGCCGT ATTGCAGGCGGAGCGCTATCTGCTGCCATGCATGGCATACCTGGATCTCAACCCCGTGCGCGCGGGCCTGTGCGCCGCGG CGGCGGACTTCCGGTGGTCCAGCCACGGCCACTACATTGGCCTGCGCAGTGACCGTCTCATCACGCCGCATGCCCTCTAC TGGGCCTTGGGCAACACCCCCTTTGCCCGCGACGCGGCCTATGCCGCACTCGTGCAGGCGGGGATTTCCGCCAGCGAACA GGCGGCACTGACGCAGTCGGGCCTGAACGGTTGGGCCCTGGGGGATGACGGGTTTGTGCAGGCTCTGCAACAGCTGACCC CCCGTCGGCTCACCCGAGCACGCGCGGGGCGTCCCGCTTCCGTGGTTCCACCCAAACCGTAA
Upstream 100 bases:
>100_bases GGGTCGGTGGCGGTATGAGCCATTTAAGCCTCTAGCGCCCGCCAATAAAGCGCTAGAAGCTATAGATTTAAGAGCAATTG AACGGTCCCAAGACGGTTTC
Downstream 100 bases:
>100_bases TTGGCCTGCACTTCCTTTGTAATGACTGGGTTTTCTGCTCCTAAAATTGATATGTCCCTAATAAAAATGCACCAATAAAG TGCGTCGACTTTTTGGTATC
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase And Inactivated Derivatives; Conserved Domain Protein; Transposase Of ISGbem_B; Transposase Family Protein; Transposase And Inactivated Derivatives Protein; Transposase-Like Protein; Transposase Or Inactivated Derivative; Methionine-R-Sulfoxide Reductase; Transposase Domain-Containing Protein
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MARLPRLALAGYPHHIIQRGNNRQPIFLDAADRELMWSLLVEHARQQQVAVHAYVLMDNHFHLLATPQEGKSLPLMMQAV GRSYVRRFNQRHGRSGTLWEGRYRSAVLQAERYLLPCMAYLDLNPVRAGLCAAAADFRWSSHGHYIGLRSDRLITPHALY WALGNTPFARDAAYAALVQAGISASEQAALTQSGLNGWALGDDGFVQALQQLTPRRLTRARAGRPASVVPPKP
Sequences:
>Translated_233_residues MARLPRLALAGYPHHIIQRGNNRQPIFLDAADRELMWSLLVEHARQQQVAVHAYVLMDNHFHLLATPQEGKSLPLMMQAV GRSYVRRFNQRHGRSGTLWEGRYRSAVLQAERYLLPCMAYLDLNPVRAGLCAAAADFRWSSHGHYIGLRSDRLITPHALY WALGNTPFARDAAYAALVQAGISASEQAALTQSGLNGWALGDDGFVQALQQLTPRRLTRARAGRPASVVPPKP >Mature_232_residues ARLPRLALAGYPHHIIQRGNNRQPIFLDAADRELMWSLLVEHARQQQVAVHAYVLMDNHFHLLATPQEGKSLPLMMQAVG RSYVRRFNQRHGRSGTLWEGRYRSAVLQAERYLLPCMAYLDLNPVRAGLCAAAADFRWSSHGHYIGLRSDRLITPHALYW ALGNTPFARDAAYAALVQAGISASEQAALTQSGLNGWALGDDGFVQALQQLTPRRLTRARAGRPASVVPPKP
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25964; Mature: 25833
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLPRLALAGYPHHIIQRGNNRQPIFLDAADRELMWSLLVEHARQQQVAVHAYVLMDNH CCCCCCHHHCCCCHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHEEEEEEEECCC FHLLATPQEGKSLPLMMQAVGRSYVRRFNQRHGRSGTLWEGRYRSAVLQAERYLLPCMAY EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHH LDLNPVRAGLCAAAADFRWSSHGHYIGLRSDRLITPHALYWALGNTPFARDAAYAALVQA HCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCEECCHHHEEECCCCCCHHHHHHHHHHHH GISASEQAALTQSGLNGWALGDDGFVQALQQLTPRRLTRARAGRPASVVPPKP CCCCHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure ARLPRLALAGYPHHIIQRGNNRQPIFLDAADRELMWSLLVEHARQQQVAVHAYVLMDNH CCCCCHHHCCCCHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHEEEEEEEECCC FHLLATPQEGKSLPLMMQAVGRSYVRRFNQRHGRSGTLWEGRYRSAVLQAERYLLPCMAY EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHH LDLNPVRAGLCAAAADFRWSSHGHYIGLRSDRLITPHALYWALGNTPFARDAAYAALVQA HCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCEECCHHHEEECCCCCCHHHHHHHHHHHH GISASEQAALTQSGLNGWALGDDGFVQALQQLTPRRLTRARAGRPASVVPPKP CCCCHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA