Click here to switch to the map view.

The map label for this gene is dppC [H]

Identifier: 222109883

GI number: 222109883

Start: 692304

End: 693215

Strand: Direct

Name: dppC [H]

Synonym: Dtpsy_0667

Alternate gene names: 222109883

Gene position: 692304-693215 (Clockwise)

Preceding gene: 222109882

Following gene: 222109884

Centisome position: 18.23

GC content: 68.2

Gene sequence:

>912_bases
ATGAAACAAACGCTCTTGCGCTGGTACGACAGCGACGTGGCCCACAGCTTTCGCACCTCGCCCGTGGCCATCATCGCGGC
GCTGATTGCCGCCGTGTGCGTGTTCTGCTCCATCTTTGCCGGCTGGGTGGCGCCACACAACCCGTTCGACCTGAGCACGC
TGGAGCTGTCGGACGCGCGCCTGCCGCCCGTGTGGCAGGCCGAAGGCACCTGGAAGTACGCCCTGGGCACCGATGACCAG
GGCCGCGACATCCTCTCGGCGCTGATCTACGGCGCGCGCATCTCGCTGGTGGTGGGCCTGGCCTCCGTGGCGCTGTCGGT
CGTCGTGGGCGTGGCGCTGGGGTTGGTGGCGGGCTTTCGCGGCGGATGGGTGGACGGCGTGCTCATGCGCCTGTGCGACG
TGATGCTGTCGTTCCCCGCCATCCTGATCGCGCTGCTGATTGCCGGCGTGGGGCGTGCGGTGTTCCCCAACGCGCCCGAT
TCGCTGGCCTTCGGCGTGCTGATCCTGTCGATCTCGCTCACGGGATGGGTGCAGTACGCGCGCACCGTGCGCGGCTCCAC
GCTGGTGGAGCGCAACAAGGAATACGTGCAGGCCGCGCGCGTCACCGGCGTGTCGCCGCTGCGCATCATGCGCAAGCATG
TGCTGCCCAACGTGCTGGGGCCGGTCATGGTGCTGGCCACCATCCAGGTGGCCACGGCCATCATTACCGAAGCCACGCTG
TCCTTCCTGGGAGTGGGCGCGCCGCCCACGTCGCCCTCGCTGGGCACGCTGATCCGCATCGGCAACGACTACCTGTTCTC
CGGCGAGTGGTGGATCACTGTCTTCCCCGGCGTGATGCTGGTGCTGATCGCGCTGTCCGTGAACCTGCTGGGCGACTGGC
TGCGCGATGCACTCAACCCGCGCCTGCGCTGA

Upstream 100 bases:

>100_bases
TGCAGATGGCCGACAACACCATGCCTTTCAAGTGGATGGGCGTGGGCCCCTGACCGTACGACCTTGCCGCCTTCCCCTTT
TTTGCCTTGACCCTTCGCTC

Downstream 100 bases:

>100_bases
AATGGAACACCTCCTGAGTCGCTTTGCGCCTTCTCCCCGCTCTCGCATGGCTGCGCCATGCGGGCAGGGGGGCGCAGCCC
TCGCTGCGGCGCGGCCGGCC

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MKQTLLRWYDSDVAHSFRTSPVAIIAALIAAVCVFCSIFAGWVAPHNPFDLSTLELSDARLPPVWQAEGTWKYALGTDDQ
GRDILSALIYGARISLVVGLASVALSVVVGVALGLVAGFRGGWVDGVLMRLCDVMLSFPAILIALLIAGVGRAVFPNAPD
SLAFGVLILSISLTGWVQYARTVRGSTLVERNKEYVQAARVTGVSPLRIMRKHVLPNVLGPVMVLATIQVATAIITEATL
SFLGVGAPPTSPSLGTLIRIGNDYLFSGEWWITVFPGVMLVLIALSVNLLGDWLRDALNPRLR

Sequences:

>Translated_303_residues
MKQTLLRWYDSDVAHSFRTSPVAIIAALIAAVCVFCSIFAGWVAPHNPFDLSTLELSDARLPPVWQAEGTWKYALGTDDQ
GRDILSALIYGARISLVVGLASVALSVVVGVALGLVAGFRGGWVDGVLMRLCDVMLSFPAILIALLIAGVGRAVFPNAPD
SLAFGVLILSISLTGWVQYARTVRGSTLVERNKEYVQAARVTGVSPLRIMRKHVLPNVLGPVMVLATIQVATAIITEATL
SFLGVGAPPTSPSLGTLIRIGNDYLFSGEWWITVFPGVMLVLIALSVNLLGDWLRDALNPRLR
>Mature_303_residues
MKQTLLRWYDSDVAHSFRTSPVAIIAALIAAVCVFCSIFAGWVAPHNPFDLSTLELSDARLPPVWQAEGTWKYALGTDDQ
GRDILSALIYGARISLVVGLASVALSVVVGVALGLVAGFRGGWVDGVLMRLCDVMLSFPAILIALLIAGVGRAVFPNAPD
SLAFGVLILSISLTGWVQYARTVRGSTLVERNKEYVQAARVTGVSPLRIMRKHVLPNVLGPVMVLATIQVATAIITEATL
SFLGVGAPPTSPSLGTLIRIGNDYLFSGEWWITVFPGVMLVLIALSVNLLGDWLRDALNPRLR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789964, Length=292, Percent_Identity=41.4383561643836, Blast_Score=189, Evalue=1e-49,
Organism=Escherichia coli, GI1787054, Length=291, Percent_Identity=34.3642611683849, Blast_Score=175, Evalue=4e-45,
Organism=Escherichia coli, GI1787760, Length=301, Percent_Identity=34.21926910299, Blast_Score=168, Evalue=5e-43,
Organism=Escherichia coli, GI1789889, Length=256, Percent_Identity=32.03125, Blast_Score=121, Evalue=6e-29,
Organism=Escherichia coli, GI1787498, Length=232, Percent_Identity=38.7931034482759, Blast_Score=120, Evalue=9e-29,
Organism=Escherichia coli, GI1788505, Length=227, Percent_Identity=35.2422907488987, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1787549, Length=269, Percent_Identity=30.8550185873606, Blast_Score=112, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32490; Mature: 32490

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQTLLRWYDSDVAHSFRTSPVAIIAALIAAVCVFCSIFAGWVAPHNPFDLSTLELSDAR
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC
LPPVWQAEGTWKYALGTDDQGRDILSALIYGARISLVVGLASVALSVVVGVALGLVAGFR
CCCCEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GGWVDGVLMRLCDVMLSFPAILIALLIAGVGRAVFPNAPDSLAFGVLILSISLTGWVQYA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RTVRGSTLVERNKEYVQAARVTGVSPLRIMRKHVLPNVLGPVMVLATIQVATAIITEATL
HHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFLGVGAPPTSPSLGTLIRIGNDYLFSGEWWITVFPGVMLVLIALSVNLLGDWLRDALNP
HHHCCCCCCCCCCHHHHEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RLR
CCC
>Mature Secondary Structure
MKQTLLRWYDSDVAHSFRTSPVAIIAALIAAVCVFCSIFAGWVAPHNPFDLSTLELSDAR
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC
LPPVWQAEGTWKYALGTDDQGRDILSALIYGARISLVVGLASVALSVVVGVALGLVAGFR
CCCCEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GGWVDGVLMRLCDVMLSFPAILIALLIAGVGRAVFPNAPDSLAFGVLILSISLTGWVQYA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RTVRGSTLVERNKEYVQAARVTGVSPLRIMRKHVLPNVLGPVMVLATIQVATAIITEATL
HHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFLGVGAPPTSPSLGTLIRIGNDYLFSGEWWITVFPGVMLVLIALSVNLLGDWLRDALNP
HHHCCCCCCCCCCHHHHEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RLR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]