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The map label for this gene is omp32 [H]

Identifier: 222109877

GI number: 222109877

Start: 683837

End: 684925

Strand: Direct

Name: omp32 [H]

Synonym: Dtpsy_0661

Alternate gene names: 222109877

Gene position: 683837-684925 (Clockwise)

Preceding gene: 222109875

Following gene: 222109878

Centisome position: 18.01

GC content: 58.31

Gene sequence:

>1089_bases
ATGAAAAAATCCCTGATTGCACTGGCAGTGCTGGCTGCTTCCGGCGCCGCAATGGCCCAATCCTCCGTGACGCTGTTCGG
TGTTGTTGACACCGCTTTCGGCTACGTGGACAACGCTAACGCCGCTGGCGACAGCGTGTATGGCCTGAGCACCAGCGGCA
ACGCAACGAGCCGTCTGGGCTTCCGCGGCGTGGAAGACCTGGGTGGCGGTCTGAAGGCTGGCTTCTGGCTGGAAGGCGAA
ATCTTCGGTGACAACGGCAACGCAGCTGGCTTCAACTTCCAGCGCCGTTCCACGGTCAGCCTGGCTGGTGGTTTCGGTGA
AGTGCGCCTGGGCCGTGACTATACCCCTGGCTACACCAAGTTCATCTCGTACGACGTCTTCGGCCAGGTTGGCATTGGCC
AATTCATGGGCTGGAGCAACTGGAATGGCAACAACCAAACCACGGCTAACAACAACAACGATGCCAACGGCATCCGTTCG
AGCAACCTGATCAGCTACTTCACCCCTAACTTCAGCGGCTTCACTGCCGGTCTTGGTTATGGCTTCGACGAAAAGGCTGA
CAAGACGAACTCGAAGAAGGGTCGTTACGTTGGTGGTTATGTTGCCTATGACAACGGCCCTTTGAGTGTTGCCCTGTCTT
ATGACGAGAGCAGCGCCCTGACCCTGGGCTCCGGTGCTACTGCCGTCAATGGTGCTGACCGCAATCGTCTGACCTTGGGC
GGTTCGTACAACCTGAACGTTGTCAAGCTGAACGCCATCCTGCAGCAGACCAAGGATGATGTCCCTGGCGGTTCCGAGCG
CAAGGTTAACGCCTACATGTTGGGCGCATCCGCTCCTGTGGGCGCTGGCGAAGTCAAGGCCCAGTACGCTCTGTACGACC
AGAAGTTCATCGACTCCAAGGCTCACCAGATCAGCCTGGGTTATGTCCACAACCTGTCCAAGCGTACGGCTCTGTACGGC
ACCGTGGCTTACCTGAAGAACAAGGACGCTTCCAACCTGGGTCTGAATGCCAAGAACCTGAGCACCGGCGGCCCCGGCGC
TGGCGAGAACCAGACTGGCGTGCAACTGGGTATTCGCCACTCCTTCTAA

Upstream 100 bases:

>100_bases
CCAGGAGGTTGGCCCGGGGAACCGGCGGGGCTGTGCGTGAGCCGCACCTCCAAGTCCTCTACGATCCGGGGCCCTCTGTT
TAACCTTGGAGTAACTCGCA

Downstream 100 bases:

>100_bases
TCTCGGGCTGGCGTGAGGCCAGCTTGGATAAAGAAGACAAAACCGCTGCCTTCGGGCAGCGGTTTTTTTTTGTCTGCGAT
TTGGTGTCTCTTGTGCGACG

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MKKSLIALAVLAASGAAMAQSSVTLFGVVDTAFGYVDNANAAGDSVYGLSTSGNATSRLGFRGVEDLGGGLKAGFWLEGE
IFGDNGNAAGFNFQRRSTVSLAGGFGEVRLGRDYTPGYTKFISYDVFGQVGIGQFMGWSNWNGNNQTTANNNNDANGIRS
SNLISYFTPNFSGFTAGLGYGFDEKADKTNSKKGRYVGGYVAYDNGPLSVALSYDESSALTLGSGATAVNGADRNRLTLG
GSYNLNVVKLNAILQQTKDDVPGGSERKVNAYMLGASAPVGAGEVKAQYALYDQKFIDSKAHQISLGYVHNLSKRTALYG
TVAYLKNKDASNLGLNAKNLSTGGPGAGENQTGVQLGIRHSF

Sequences:

>Translated_362_residues
MKKSLIALAVLAASGAAMAQSSVTLFGVVDTAFGYVDNANAAGDSVYGLSTSGNATSRLGFRGVEDLGGGLKAGFWLEGE
IFGDNGNAAGFNFQRRSTVSLAGGFGEVRLGRDYTPGYTKFISYDVFGQVGIGQFMGWSNWNGNNQTTANNNNDANGIRS
SNLISYFTPNFSGFTAGLGYGFDEKADKTNSKKGRYVGGYVAYDNGPLSVALSYDESSALTLGSGATAVNGADRNRLTLG
GSYNLNVVKLNAILQQTKDDVPGGSERKVNAYMLGASAPVGAGEVKAQYALYDQKFIDSKAHQISLGYVHNLSKRTALYG
TVAYLKNKDASNLGLNAKNLSTGGPGAGENQTGVQLGIRHSF
>Mature_362_residues
MKKSLIALAVLAASGAAMAQSSVTLFGVVDTAFGYVDNANAAGDSVYGLSTSGNATSRLGFRGVEDLGGGLKAGFWLEGE
IFGDNGNAAGFNFQRRSTVSLAGGFGEVRLGRDYTPGYTKFISYDVFGQVGIGQFMGWSNWNGNNQTTANNNNDANGIRS
SNLISYFTPNFSGFTAGLGYGFDEKADKTNSKKGRYVGGYVAYDNGPLSVALSYDESSALTLGSGATAVNGADRNRLTLG
GSYNLNVVKLNAILQQTKDDVPGGSERKVNAYMLGASAPVGAGEVKAQYALYDQKFIDSKAHQISLGYVHNLSKRTALYG
TVAYLKNKDASNLGLNAKNLSTGGPGAGENQTGVQLGIRHSF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 37887; Mature: 37887

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLIALAVLAASGAAMAQSSVTLFGVVDTAFGYVDNANAAGDSVYGLSTSGNATSRLG
CCCHHEEEEEHHHCCCHHHHCCEEEEEEEHHHHCCCCCCCCCCCEEEEEECCCCCCCCCC
FRGVEDLGGGLKAGFWLEGEIFGDNGNAAGFNFQRRSTVSLAGGFGEVRLGRDYTPGYTK
CCCHHHHCCCCEECEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCHHE
FISYDVFGQVGIGQFMGWSNWNGNNQTTANNNNDANGIRSSNLISYFTPNFSGFTAGLGY
EEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEECCCCC
GFDEKADKTNSKKGRYVGGYVAYDNGPLSVALSYDESSALTLGSGATAVNGADRNRLTLG
CCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCEEEECCCCCEECCCCCCEEEEC
GSYNLNVVKLNAILQQTKDDVPGGSERKVNAYMLGASAPVGAGEVKAQYALYDQKFIDSK
CCCCEEEEEEHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHEEEEEEHHHHHHCCC
AHQISLGYVHNLSKRTALYGTVAYLKNKDASNLGLNAKNLSTGGPGAGENQTGVQLGIRH
CEEEEEHHHHCCCHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
SF
CC
>Mature Secondary Structure
MKKSLIALAVLAASGAAMAQSSVTLFGVVDTAFGYVDNANAAGDSVYGLSTSGNATSRLG
CCCHHEEEEEHHHCCCHHHHCCEEEEEEEHHHHCCCCCCCCCCCEEEEEECCCCCCCCCC
FRGVEDLGGGLKAGFWLEGEIFGDNGNAAGFNFQRRSTVSLAGGFGEVRLGRDYTPGYTK
CCCHHHHCCCCEECEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCHHE
FISYDVFGQVGIGQFMGWSNWNGNNQTTANNNNDANGIRSSNLISYFTPNFSGFTAGLGY
EEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEECCCCC
GFDEKADKTNSKKGRYVGGYVAYDNGPLSVALSYDESSALTLGSGATAVNGADRNRLTLG
CCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCEEEECCCCCEECCCCCCEEEEC
GSYNLNVVKLNAILQQTKDDVPGGSERKVNAYMLGASAPVGAGEVKAQYALYDQKFIDSK
CCCCEEEEEEHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHEEEEEEHHHHHHCCC
AHQISLGYVHNLSKRTALYGTVAYLKNKDASNLGLNAKNLSTGGPGAGENQTGVQLGIRH
CEEEEEHHHHCCCHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
SF
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]