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The map label for this gene is slmA [H]

Identifier: 222109785

GI number: 222109785

Start: 588686

End: 589330

Strand: Direct

Name: slmA [H]

Synonym: Dtpsy_0569

Alternate gene names: 222109785

Gene position: 588686-589330 (Clockwise)

Preceding gene: 222109784

Following gene: 222109786

Centisome position: 15.51

GC content: 68.68

Gene sequence:

>645_bases
ATGACTGAATTCACGCCTGCTACTGACGCGCCAGCCTCCACCGACGACGCGCCCGCCGCGCGCCGCCGGCCGCGGCCGGG
CGAGCGGCGTGAGCAGATCCTGCAGACCCTGGCGGCCATGCTGGAGCAGCCCGGGGCCGAGCGCATCACCACGGCAGCGC
TTGCGGCGCGCCTGCAGGTGAGCGAGGCGGCGCTGTACCGCCACTTTGCCAGCAAAGCACAGATGTTCGAGGCGCTCATC
GATTTCATCGAGCAGAGCGTCTTTACCCTTGTGCACCAGATCATGGAGCGCGGTGGCGAGTCTGAGGGCGCGCAACGCGC
GGCGCGCATCACGGCCATGGTGCTGCAGTTCGGCGAGCGCAACCCCGGCATGGTGCGCGTGATGGTGGGGGATGCGCTGG
TTTTCGAAAACGAGCGCCTGCAGCAGCGCATGAACCTGTTCTTCGACAAGGTGGAGGCCACGCTGCGCCAGTGCCTACGG
CCCGTGGCCGACGCGGACGGCTCGGCGACACCCACGGTGCAGACACAGGTGCGGGCGGCCGCACTGTCCGACCTGATCCG
CGGACGCCTGCAGCGCTACGCACGCACGGGCTTTCGCCGCATGCCGACGGAACACCTGGACGCCACTCTGGCACTGTGGC
TGTAA

Upstream 100 bases:

>100_bases
CCAAGGGTCGCTGCACAGCGAGCAGCCGTCACGACGCTGGAGTCGTGGTGTGCGAGAATCAATTGCACACACTTGTTGCT
CTCCCTCCGATCCATGCCCC

Downstream 100 bases:

>100_bases
CGCCGGCGCAGGCAAGCGCGATGGCATGACCACCCGCGAAAGGCGCGGTAAGCATTTCGCCCTTGACACGGTCCCCCGCG
ATGGTGGGGCTCGATAAATC

Product: nucleoid occlusion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MTEFTPATDAPASTDDAPAARRRPRPGERREQILQTLAAMLEQPGAERITTAALAARLQVSEAALYRHFASKAQMFEALI
DFIEQSVFTLVHQIMERGGESEGAQRAARITAMVLQFGERNPGMVRVMVGDALVFENERLQQRMNLFFDKVEATLRQCLR
PVADADGSATPTVQTQVRAAALSDLIRGRLQRYARTGFRRMPTEHLDATLALWL

Sequences:

>Translated_214_residues
MTEFTPATDAPASTDDAPAARRRPRPGERREQILQTLAAMLEQPGAERITTAALAARLQVSEAALYRHFASKAQMFEALI
DFIEQSVFTLVHQIMERGGESEGAQRAARITAMVLQFGERNPGMVRVMVGDALVFENERLQQRMNLFFDKVEATLRQCLR
PVADADGSATPTVQTQVRAAALSDLIRGRLQRYARTGFRRMPTEHLDATLALWL
>Mature_213_residues
TEFTPATDAPASTDDAPAARRRPRPGERREQILQTLAAMLEQPGAERITTAALAARLQVSEAALYRHFASKAQMFEALID
FIEQSVFTLVHQIMERGGESEGAQRAARITAMVLQFGERNPGMVRVMVGDALVFENERLQQRMNLFFDKVEATLRQCLRP
VADADGSATPTVQTQVRAAALSDLIRGRLQRYARTGFRRMPTEHLDATLALWL

Specific function: Required for nucleoid occlusion (NO) phenomenon, which cooperates in the proper positioning of the ftsZ/septal ring at midcell during cell division [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082302, Length=181, Percent_Identity=46.9613259668508, Blast_Score=147, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 23870; Mature: 23738

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEFTPATDAPASTDDAPAARRRPRPGERREQILQTLAAMLEQPGAERITTAALAARLQV
CCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
SEAALYRHFASKAQMFEALIDFIEQSVFTLVHQIMERGGESEGAQRAARITAMVLQFGER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
NPGMVRVMVGDALVFENERLQQRMNLFFDKVEATLRQCLRPVADADGSATPTVQTQVRAA
CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ALSDLIRGRLQRYARTGFRRMPTEHLDATLALWL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure 
TEFTPATDAPASTDDAPAARRRPRPGERREQILQTLAAMLEQPGAERITTAALAARLQV
CCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
SEAALYRHFASKAQMFEALIDFIEQSVFTLVHQIMERGGESEGAQRAARITAMVLQFGER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
NPGMVRVMVGDALVFENERLQQRMNLFFDKVEATLRQCLRPVADADGSATPTVQTQVRAA
CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ALSDLIRGRLQRYARTGFRRMPTEHLDATLALWL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA