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The map label for this gene is ydjA [C]

Identifier: 222109654

GI number: 222109654

Start: 446933

End: 447577

Strand: Direct

Name: ydjA [C]

Synonym: Dtpsy_0434

Alternate gene names: 222109654

Gene position: 446933-447577 (Clockwise)

Preceding gene: 222109653

Following gene: 222109655

Centisome position: 11.77

GC content: 73.49

Gene sequence:

>645_bases
GTGCCTCCACAGGCCTTGAACAATGCAGCCGCCACGGCGGAACTGGCCGCCGCGCTGCTGCAGGCGCGCCAGACCATCCT
GCCCAAGCGGCTGGGCGCGCCGGGGCCGGACGCCGCGCAGCTGCAGGCCATATTGGCCGCGGCCGCGCATGCGCCGGACC
ATGGCTGTCTGCTGCCCTGGCGTTTTGTCTTGGTGCCCGACGCGGCCCGCGCGGCGCTCGGCCAGGCGTTTGCCGATGCG
CTGCGCGAGCGCGACGCGCAGGCCACGCCCGAGCAGCAGGAGCAGGCGCGCGAGAAGGCCCTGCGCGCGCCCGTGCTGCT
GCTGGTGGTGGTGGACGAATGCGGGGGCGATCCCGAGATCGCACCCAGTGAGCGGCTGGTGTCCGCGGGTTGCGCGGTGC
AGAACCTGCTGCTCATGGCGACCGCGCTGGGTTTTGGCTCCGCGCTCACCAGCGGCAAGGCGCTGCAGTCGCAGGCGCTG
CGCGGGCTGTTCGCGCTGGGCGAAGGCGAGCGCGCGCTGTGTTTCGTGAGCGTGGGAACGGTCGTGTCGCGCAAGCCCGT
GCGCGCGCGGCCCGTGCCGGCGCAGTATGTGGGCACGCTGGTGCCCGGCCGGGGCGTGCAGCCTTGGCCGCAACAAGGGG
AATGA

Upstream 100 bases:

>100_bases
CTGGCATCATGGCGGTGTGGGGCCTGCGCCTCATCGGCTGGTATGGCCGGCTGCGCGCCGATGGCCGGCCGGGGTGAATG
CCATGGAACAGGAGAGACCG

Downstream 100 bases:

>100_bases
ATGCAAGTGAAAACCGAGATCAACAGTTTTGACGACCTGCTGCGCGCCGCGCGCAGCCACCGCGAGCGCCAGCGCCTGCT
GTTCGTGTTTGCTGGCACAG

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MPPQALNNAAATAELAAALLQARQTILPKRLGAPGPDAAQLQAILAAAAHAPDHGCLLPWRFVLVPDAARAALGQAFADA
LRERDAQATPEQQEQAREKALRAPVLLLVVVDECGGDPEIAPSERLVSAGCAVQNLLLMATALGFGSALTSGKALQSQAL
RGLFALGEGERALCFVSVGTVVSRKPVRARPVPAQYVGTLVPGRGVQPWPQQGE

Sequences:

>Translated_214_residues
MPPQALNNAAATAELAAALLQARQTILPKRLGAPGPDAAQLQAILAAAAHAPDHGCLLPWRFVLVPDAARAALGQAFADA
LRERDAQATPEQQEQAREKALRAPVLLLVVVDECGGDPEIAPSERLVSAGCAVQNLLLMATALGFGSALTSGKALQSQAL
RGLFALGEGERALCFVSVGTVVSRKPVRARPVPAQYVGTLVPGRGVQPWPQQGE
>Mature_213_residues
PPQALNNAAATAELAAALLQARQTILPKRLGAPGPDAAQLQAILAAAAHAPDHGCLLPWRFVLVPDAARAALGQAFADAL
RERDAQATPEQQEQAREKALRAPVLLLVVVDECGGDPEIAPSERLVSAGCAVQNLLLMATALGFGSALTSGKALQSQALR
GLFALGEGERALCFVSVGTVVSRKPVRARPVPAQYVGTLVPGRGVQPWPQQGE

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=153, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 22225; Mature: 22094

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPQALNNAAATAELAAALLQARQTILPKRLGAPGPDAAQLQAILAAAAHAPDHGCLLPW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCE
RFVLVPDAARAALGQAFADALRERDAQATPEQQEQAREKALRAPVLLLVVVDECGGDPEI
EEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCC
APSERLVSAGCAVQNLLLMATALGFGSALTSGKALQSQALRGLFALGEGERALCFVSVGT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCH
VVSRKPVRARPVPAQYVGTLVPGRGVQPWPQQGE
HHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PPQALNNAAATAELAAALLQARQTILPKRLGAPGPDAAQLQAILAAAAHAPDHGCLLPW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCE
RFVLVPDAARAALGQAFADALRERDAQATPEQQEQAREKALRAPVLLLVVVDECGGDPEI
EEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCC
APSERLVSAGCAVQNLLLMATALGFGSALTSGKALQSQALRGLFALGEGERALCFVSVGT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCH
VVSRKPVRARPVPAQYVGTLVPGRGVQPWPQQGE
HHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]