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The map label for this gene is yraN [C]

Identifier: 222109626

GI number: 222109626

Start: 412287

End: 412685

Strand: Direct

Name: yraN [C]

Synonym: Dtpsy_0406

Alternate gene names: 222109626

Gene position: 412287-412685 (Clockwise)

Preceding gene: 222109624

Following gene: 222109627

Centisome position: 10.86

GC content: 73.68

Gene sequence:

>399_bases
ATGGGATTCCTCGGCAAGAAGGTGAATGGCAGTGCGCCCGCGCGCACCACGCGCGCCGCGGGGCAGGCGGCGGAAGACCG
CGCGCTGGCCCATCTCACGGCGGCGGGCCTGGCGCTGGTGGAGCGCAATTATCGGACGCCGGGGCGCGGCGGCGGAGAGA
TCGACCTGATCTTGCGCGAGCGCGACGGCACGCTGGTGTTCGTGGAGGTGCGCAGCCGCGGCGCCAGCGCCTACGGCGGC
GCGGGCGGCAGCATCGGCGTGGCCAAGCAGCGGCGCATCGTCTTTGCTGCGCAGCACTACCTGCTGCGCTGGCCCGCACC
GCCGCCGTGCCGCTTCGATGCGGTGCTCATCGAGGGCGACCGGCTGCAGTGGCTGCGCGGCGCATTCGACGCCGCGTAG

Upstream 100 bases:

>100_bases
CCGATGGGCGTGGCGACCACGTACAGGGCGCCCTGCGGATAATGCTGCGCGGCCGCCGCATCGCGCGCGGCGCTCAAGGC
AGAGGCAAAAGAGGCGCTCA

Downstream 100 bases:

>100_bases
CGCGCGGCCTACCGTTTGCTACAGGCGCCGCGATACCCGCAGGTATCATTCACGGCCCATGCTTGAGCAACGCATCCAAC
AGCATTTCATCGACAGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MGFLGKKVNGSAPARTTRAAGQAAEDRALAHLTAAGLALVERNYRTPGRGGGEIDLILRERDGTLVFVEVRSRGASAYGG
AGGSIGVAKQRRIVFAAQHYLLRWPAPPPCRFDAVLIEGDRLQWLRGAFDAA

Sequences:

>Translated_132_residues
MGFLGKKVNGSAPARTTRAAGQAAEDRALAHLTAAGLALVERNYRTPGRGGGEIDLILRERDGTLVFVEVRSRGASAYGG
AGGSIGVAKQRRIVFAAQHYLLRWPAPPPCRFDAVLIEGDRLQWLRGAFDAA
>Mature_131_residues
GFLGKKVNGSAPARTTRAAGQAAEDRALAHLTAAGLALVERNYRTPGRGGGEIDLILRERDGTLVFVEVRSRGASAYGGA
GGSIGVAKQRRIVFAAQHYLLRWPAPPPCRFDAVLIEGDRLQWLRGAFDAA

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

Organism=Escherichia coli, GI1789538, Length=125, Percent_Identity=37.6, Blast_Score=74, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 14071; Mature: 13940

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFLGKKVNGSAPARTTRAAGQAAEDRALAHLTAAGLALVERNYRTPGRGGGEIDLILRE
CCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEE
RDGTLVFVEVRSRGASAYGGAGGSIGVAKQRRIVFAAQHYLLRWPAPPPCRFDAVLIEGD
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECEEEEECCCCCCCCEEEEEEECC
RLQWLRGAFDAA
CCHHHHHHCCCC
>Mature Secondary Structure 
GFLGKKVNGSAPARTTRAAGQAAEDRALAHLTAAGLALVERNYRTPGRGGGEIDLILRE
CCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEE
RDGTLVFVEVRSRGASAYGGAGGSIGVAKQRRIVFAAQHYLLRWPAPPPCRFDAVLIEGD
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECEEEEECCCCCCCCEEEEEEECC
RLQWLRGAFDAA
CCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA