| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109466
Identifier: 222109466
GI number: 222109466
Start: 266440
End: 267417
Strand: Direct
Name: 222109466
Synonym: Dtpsy_0246
Alternate gene names: NA
Gene position: 266440-267417 (Clockwise)
Preceding gene: 222109465
Following gene: 222109467
Centisome position: 7.02
GC content: 72.6
Gene sequence:
>978_bases ATGGAAAACAAGTCCCATGCCCTGGCCGCAGGCATTTTCGTGATCGCCGTGGCGGCGCTGCTGGCCGGCCTCGGCATGTG GCTCACGCGCGACCAGACCGATTACCAGCTCTACGAGCTGTCCAGCAAGGACAGCGTGAGCGGCCTGCAGCCCCAGGCAG CCGTGCGCTACAAGGGCGTGGCCGTAGGCAAGGTCACGCACATCGGTTTTGACCCGCAGGTCGCGGGCAACGTGCTGATC CGTATCGCCGTGAATGCGGACGCGCCCATCAGCCCCACCACCTTCGCCACGCTGGGCTACCAGGGCGTGACGGGCCTGGC TCATGTGCAGCTGGACGACGCGGAGGCGCCGCTGCCCGCGCCGCCGCCGGGCGCCAGCGGGCTGCCGCGCCTGCCGCTGC ACAGCTCCTCGTTCAGCCAACTGGCCGAGCAGGGCCCGGCCATCCTGGGCCAGGTGCAGGAGGCCACGCAGCGCATCAAC ACCCTGCTGGGCGACGAGAACCAGCAGCGCTTTTCCACAGCACTGAAGCAGTTGGGCGACGCGGCGGGCAGCATCGACCA GCTCGCGCGCCGCCTGGACAACACCGTGACCACCCGGCTGGACCCCGCGCTGGCGGGCGTGCCGCCGCTGGTGCAGGACA CGCAGCAGACCCTGCAGGCGCTGCGCCAGGCGGGCAGCAGCGCGGCCACGGCCGCCAACGACGTCAGCCAGGCCATCCGC ACGCTGCAGGCCGAGGGCGGCGCGCTCGACGAGATCGCCGCGGGCGCCAAGTCGCTGGCCGGCGCGGCCGACCGCTTCGG CCGCGTCACGCTGCCGCGCATCAACCATGCGGCCGACGAGACCGCGCGCGCCGCGCGCCGCCTGGGCCGCACGGCCTCGG GCATCAACGACAACCCGCAGTCGCTCATCTATGGACCAGGCCGCTCGGCCGCGGGGCCCGGCGAGCCCGGTTTCACCGCT CCCGCAGCGCAGCCCTGA
Upstream 100 bases:
>100_bases CGCGCTTCGACCATCCCTTCATTCACCACTTTTTTCTCGGAGAACGCGGCCGCCGTGCCATGGCCCAGCCGCCCGCCGCT TCTTCGTCCAAGGAAGCCTG
Downstream 100 bases:
>100_bases CGCATTGCAAGGACCTTATGATGACTATCAAAATGATAGCTGTTGGCGCTCACCAGATAAGCGTTAAAGCCATTTTTGGC TTCACATTTATGGCGCTGAT
Product: mammalian cell entry related domain-containing protein
Products: NA
Alternate protein names: Mce Related Protein; Mammalian Cell Entry Related Domain-Containing Protein; ABC-Type Transporter Periplasmic Component; ABC Membrane Transporter Periplasmic Protein; Mce Related Family; Mce Family Protein; Signal Peptide Protein; Periplasmic Protein; Exported Protein
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MENKSHALAAGIFVIAVAALLAGLGMWLTRDQTDYQLYELSSKDSVSGLQPQAAVRYKGVAVGKVTHIGFDPQVAGNVLI RIAVNADAPISPTTFATLGYQGVTGLAHVQLDDAEAPLPAPPPGASGLPRLPLHSSSFSQLAEQGPAILGQVQEATQRIN TLLGDENQQRFSTALKQLGDAAGSIDQLARRLDNTVTTRLDPALAGVPPLVQDTQQTLQALRQAGSSAATAANDVSQAIR TLQAEGGALDEIAAGAKSLAGAADRFGRVTLPRINHAADETARAARRLGRTASGINDNPQSLIYGPGRSAAGPGEPGFTA PAAQP
Sequences:
>Translated_325_residues MENKSHALAAGIFVIAVAALLAGLGMWLTRDQTDYQLYELSSKDSVSGLQPQAAVRYKGVAVGKVTHIGFDPQVAGNVLI RIAVNADAPISPTTFATLGYQGVTGLAHVQLDDAEAPLPAPPPGASGLPRLPLHSSSFSQLAEQGPAILGQVQEATQRIN TLLGDENQQRFSTALKQLGDAAGSIDQLARRLDNTVTTRLDPALAGVPPLVQDTQQTLQALRQAGSSAATAANDVSQAIR TLQAEGGALDEIAAGAKSLAGAADRFGRVTLPRINHAADETARAARRLGRTASGINDNPQSLIYGPGRSAAGPGEPGFTA PAAQP >Mature_325_residues MENKSHALAAGIFVIAVAALLAGLGMWLTRDQTDYQLYELSSKDSVSGLQPQAAVRYKGVAVGKVTHIGFDPQVAGNVLI RIAVNADAPISPTTFATLGYQGVTGLAHVQLDDAEAPLPAPPPGASGLPRLPLHSSSFSQLAEQGPAILGQVQEATQRIN TLLGDENQQRFSTALKQLGDAAGSIDQLARRLDNTVTTRLDPALAGVPPLVQDTQQTLQALRQAGSSAATAANDVSQAIR TLQAEGGALDEIAAGAKSLAGAADRFGRVTLPRINHAADETARAARRLGRTASGINDNPQSLIYGPGRSAAGPGEPGFTA PAAQP
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33508; Mature: 33508
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENKSHALAAGIFVIAVAALLAGLGMWLTRDQTDYQLYELSSKDSVSGLQPQAAVRYKGV CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCE AVGKVTHIGFDPQVAGNVLIRIAVNADAPISPTTFATLGYQGVTGLAHVQLDDAEAPLPA EEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCCC PPPGASGLPRLPLHSSSFSQLAEQGPAILGQVQEATQRINTLLGDENQQRFSTALKQLGD CCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AAGSIDQLARRLDNTVTTRLDPALAGVPPLVQDTQQTLQALRQAGSSAATAANDVSQAIR HCCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH TLQAEGGALDEIAAGAKSLAGAADRFGRVTLPRINHAADETARAARRLGRTASGINDNPQ HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHCCCCCCCC SLIYGPGRSAAGPGEPGFTAPAAQP EEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MENKSHALAAGIFVIAVAALLAGLGMWLTRDQTDYQLYELSSKDSVSGLQPQAAVRYKGV CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCE AVGKVTHIGFDPQVAGNVLIRIAVNADAPISPTTFATLGYQGVTGLAHVQLDDAEAPLPA EEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCCC PPPGASGLPRLPLHSSSFSQLAEQGPAILGQVQEATQRINTLLGDENQQRFSTALKQLGD CCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AAGSIDQLARRLDNTVTTRLDPALAGVPPLVQDTQQTLQALRQAGSSAATAANDVSQAIR HCCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH TLQAEGGALDEIAAGAKSLAGAADRFGRVTLPRINHAADETARAARRLGRTASGINDNPQ HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHCCCCCCCC SLIYGPGRSAAGPGEPGFTAPAAQP EEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA