| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is ccp [H]
Identifier: 222109417
GI number: 222109417
Start: 218574
End: 219593
Strand: Direct
Name: ccp [H]
Synonym: Dtpsy_0196
Alternate gene names: 222109417
Gene position: 218574-219593 (Clockwise)
Preceding gene: 222109416
Following gene: 222109420
Centisome position: 5.76
GC content: 65.39
Gene sequence:
>1020_bases ATGCAAAGCCAGTCCCCCTCCTCCCGTCCCGCCGCGCGGTTCTTCCTGGGCATCGTCTCGGCTGCGGCCCTGCTGTCCAT GGGCAGCGCCGGCGCACAGGAGCCCGTGCAGCCCATCGTGCCCCACAAGGTGACCAACCCCGCCCAGGTCACGCTGGGCA AGAAGCTGTGGTTCGATCCGCGCCTGTCGCGCTCGGGCTTCATCTCGTGCAACTCGTGCCACAACCTGAGCATGGGCGGC TCGGACAACCTCAAGACCTCCATCGGCGACAAGTGGCAGAAAGGCCCGATCAACTCGCCCACGGTGTTGAACTCCAGTCT CAACCTGGCCCAGTTCTGGGACGGCCGCGCGAAGGACCTGAAAGAGCAGGCGGGCGGTCCCATCGCCAACCCGGGCGAGA TGGCCTTCTCGCATGACCTCGCGGTAGACATGCTGCGCTCCATTCCCCAGTACGTGGCGGAGTTCAAGCGGGTCTTCGGG CATGACAAGCTCACCATCGATGAGGTGACGGCCGCCATTGCCGCGTTCGAGGAAACGCTGGTGACTCCCAACGCGCGCTT CGACCAATGGCTCAAAGGCGACAAGAAGGCCATCACGGCGCAGGAACTGCGCGGCTACCAGCTCTTCAAGACCAGCGGCT GCGTGGCCTGCCACAACGGCCCCAACCTGGGCGGCAACTCCTTCCAGAAGATGGGCCTGGTCGAGGCATACAAGACGGAC AACCCGGCCGAGGGCCGCTCCGCCGTCACGGGCAACGACGCCGAGCGCTTCAACTTCAAGGTGCCCACGCTGCGCAACGT GGAACTGACCTACCCTTACTTCCACGACGGCGCTGCCGACACGCTGGCCGAAGCCGTGGACACCATGGGCCGCATCCAGT TGGGCAAGAAGTTCACCGCGCAGGAGAACGCCGACATCGTGGCCTTCCTCAAGACGCTCACGGGCGATCAGCCGCGGATC TCCCTGCCGATCCTGCCGCCCTCCAGCGATGCGACCAAGCGCCCTCAGCCCTTCGACTGA
Upstream 100 bases:
>100_bases GACTCTCACAGCGAACACCTGCTGTGCGGCCCGCAGGGCGCCCCGGGTGCTCGGGCGTGCAGCGCTTTGAACGTTCGCTG AACAAGAAGTGGAGTCCCCT
Downstream 100 bases:
>100_bases TGCGCCGTCACGGATGAAAGCCGGCCCGCTTGCGGGCCTTTACAGGCCGGGGCCTCGCAAGGGGCGCCGGCCTTTTTTGG GGGGGCCTGGGCGTCAGGCC
Product: cytochrome-c peroxidase
Products: NA
Alternate protein names: Cytochrome c peroxidase [H]
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MQSQSPSSRPAARFFLGIVSAAALLSMGSAGAQEPVQPIVPHKVTNPAQVTLGKKLWFDPRLSRSGFISCNSCHNLSMGG SDNLKTSIGDKWQKGPINSPTVLNSSLNLAQFWDGRAKDLKEQAGGPIANPGEMAFSHDLAVDMLRSIPQYVAEFKRVFG HDKLTIDEVTAAIAAFEETLVTPNARFDQWLKGDKKAITAQELRGYQLFKTSGCVACHNGPNLGGNSFQKMGLVEAYKTD NPAEGRSAVTGNDAERFNFKVPTLRNVELTYPYFHDGAADTLAEAVDTMGRIQLGKKFTAQENADIVAFLKTLTGDQPRI SLPILPPSSDATKRPQPFD
Sequences:
>Translated_339_residues MQSQSPSSRPAARFFLGIVSAAALLSMGSAGAQEPVQPIVPHKVTNPAQVTLGKKLWFDPRLSRSGFISCNSCHNLSMGG SDNLKTSIGDKWQKGPINSPTVLNSSLNLAQFWDGRAKDLKEQAGGPIANPGEMAFSHDLAVDMLRSIPQYVAEFKRVFG HDKLTIDEVTAAIAAFEETLVTPNARFDQWLKGDKKAITAQELRGYQLFKTSGCVACHNGPNLGGNSFQKMGLVEAYKTD NPAEGRSAVTGNDAERFNFKVPTLRNVELTYPYFHDGAADTLAEAVDTMGRIQLGKKFTAQENADIVAFLKTLTGDQPRI SLPILPPSSDATKRPQPFD >Mature_339_residues MQSQSPSSRPAARFFLGIVSAAALLSMGSAGAQEPVQPIVPHKVTNPAQVTLGKKLWFDPRLSRSGFISCNSCHNLSMGG SDNLKTSIGDKWQKGPINSPTVLNSSLNLAQFWDGRAKDLKEQAGGPIANPGEMAFSHDLAVDMLRSIPQYVAEFKRVFG HDKLTIDEVTAAIAAFEETLVTPNARFDQWLKGDKKAITAQELRGYQLFKTSGCVACHNGPNLGGNSFQKMGLVEAYKTD NPAEGRSAVTGNDAERFNFKVPTLRNVELTYPYFHDGAADTLAEAVDTMGRIQLGKKFTAQENADIVAFLKTLTGDQPRI SLPILPPSSDATKRPQPFD
Specific function: Unknown
COG id: COG1858
COG function: function code P; Cytochrome c peroxidase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789935, Length=287, Percent_Identity=48.780487804878, Blast_Score=248, Evalue=5e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR003088 - InterPro: IPR004852 [H]
Pfam domain/function: PF03150 CCP_MauG; PF00034 Cytochrom_C [H]
EC number: =1.11.1.5 [H]
Molecular weight: Translated: 36755; Mature: 36755
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSQSPSSRPAARFFLGIVSAAALLSMGSAGAQEPVQPIVPHKVTNPAQVTLGKKLWFDP CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHEEECCCCCCCC RLSRSGFISCNSCHNLSMGGSDNLKTSIGDKWQKGPINSPTVLNSSLNLAQFWDGRAKDL CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHCCCHHHHH KEQAGGPIANPGEMAFSHDLAVDMLRSIPQYVAEFKRVFGHDKLTIDEVTAAIAAFEETL HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH VTPNARFDQWLKGDKKAITAQELRGYQLFKTSGCVACHNGPNLGGNSFQKMGLVEAYKTD CCCCCHHHHHHCCCHHHHHHHHHCCEEEEECCCEEEECCCCCCCCCHHHHHCHHHHHCCC NPAEGRSAVTGNDAERFNFKVPTLRNVELTYPYFHDGAADTLAEAVDTMGRIQLGKKFTA CCCCCCCCCCCCCCHHEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEECC QENADIVAFLKTLTGDQPRISLPILPPSSDATKRPQPFD CCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MQSQSPSSRPAARFFLGIVSAAALLSMGSAGAQEPVQPIVPHKVTNPAQVTLGKKLWFDP CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHEEECCCCCCCC RLSRSGFISCNSCHNLSMGGSDNLKTSIGDKWQKGPINSPTVLNSSLNLAQFWDGRAKDL CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHCCCHHHHH KEQAGGPIANPGEMAFSHDLAVDMLRSIPQYVAEFKRVFGHDKLTIDEVTAAIAAFEETL HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH VTPNARFDQWLKGDKKAITAQELRGYQLFKTSGCVACHNGPNLGGNSFQKMGLVEAYKTD CCCCCHHHHHHCCCHHHHHHHHHCCEEEEECCCEEEECCCCCCCCCHHHHHCHHHHHCCC NPAEGRSAVTGNDAERFNFKVPTLRNVELTYPYFHDGAADTLAEAVDTMGRIQLGKKFTA CCCCCCCCCCCCCCHHEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEECC QENADIVAFLKTLTGDQPRISLPILPPSSDATKRPQPFD CCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12700255; 8163487 [H]