Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is 222109364

Identifier: 222109364

GI number: 222109364

Start: 161170

End: 162144

Strand: Direct

Name: 222109364

Synonym: Dtpsy_0143

Alternate gene names: NA

Gene position: 161170-162144 (Clockwise)

Preceding gene: 222109363

Following gene: 222109365

Centisome position: 4.25

GC content: 67.18

Gene sequence:

>975_bases
ATGCCCGCTTCCCGTCGTCTCGCCACGGCCGCCCTGGCCCTGGCGCCTTTCGCCTTCGCTCTGCCTGCCGCCGCGCAGGA
CGGCCAGCCCGTGCGCCTCATCGTGGGCTATGCCGCGGGCGGCCCCGTGGACCAGGGGGCGCGCCTGTTCGCACCGGCGC
TGTCCAAGGAACTGGGCATGCCGGTCATGGTGGAAAACAAGACCGGCGCCAACGCCACCATTGCCGGCAGCGAGGTAGTG
CGGTCCAAGCCCGATGGCATGACGCTGTGGTTTGCCGCCAGCCCCACCATCACCATCAGCCCCAATGTGATGACCAAGAT
GCCGTTCGACCCGGCCAAGGACCTGACGCCCGTGGCGCCCATCCTGAGCTACTACAACGTGCTGGTGGTGAACAACAACG
AGCCCTACAAGAGCGTGCGCGAGCTGGTGGCCACCGCCAAGTCCAATCCGGGCAAGCTCGCCTACGGCTCGGCCGGTGTG
GGCGGCTCCAACCATCTGGGCGCGCTGCTGTTCGCCAAGCGCAGCGGCATCGAGATGAACCACATCCCCTACAAGGGCAA
CGCCCCGGCGATGACGGACGTGATCGGCGGCCAGCTCAACATGATGCTGGACATCATCAGCACCGCCAGCGCCTACATCC
ACAGTGGCAAGGTGCGCGCCATTGCCGTCACCTCGCCGCAGCGCAATGCCTCGCTGCCGGACGTGCCCACGTTCGCCGAG
TCGGGCATCGACGGCCTCAAGGGCTTCGACGTGGGTGGTTGGTACGGCGTCTATGGTCCCAAGGGCATGTCGCCCGAGCT
GGTGGCCAAGCTCAACAAGGCCGTCAATGCCGCGTTGCAGCAACCCGATCTGAAGAAGCGGTACAAGGAGCTGGGCTACG
ACGAGTGGACCGGCGCGCCGCAGAAGCTGGCCGAGCGCGGCGCCCAGGAGCGCGCCATGTGGGCCACGGTGACCCAGGGC
ATCACCGTGGATTGA

Upstream 100 bases:

>100_bases
CAGATTCCCAGCGTGCGCACCGGGCCGCACCATTGCTGCCAACGTGCTGGCCCTCCGCCCCAGCGGTGCCCGCGTTACCT
ACAACATCAGGAGACACACC

Downstream 100 bases:

>100_bases
GATGGCAGAGCGCATCCATCACCTGCTGGACCGCTGGCTGGCCGAGGCGCCCGCGCGGCCCTTCATTCATCTGCCGGACG
GCCGCAGCCTGAGTTTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MPASRRLATAALALAPFAFALPAAAQDGQPVRLIVGYAAGGPVDQGARLFAPALSKELGMPVMVENKTGANATIAGSEVV
RSKPDGMTLWFAASPTITISPNVMTKMPFDPAKDLTPVAPILSYYNVLVVNNNEPYKSVRELVATAKSNPGKLAYGSAGV
GGSNHLGALLFAKRSGIEMNHIPYKGNAPAMTDVIGGQLNMMLDIISTASAYIHSGKVRAIAVTSPQRNASLPDVPTFAE
SGIDGLKGFDVGGWYGVYGPKGMSPELVAKLNKAVNAALQQPDLKKRYKELGYDEWTGAPQKLAERGAQERAMWATVTQG
ITVD

Sequences:

>Translated_324_residues
MPASRRLATAALALAPFAFALPAAAQDGQPVRLIVGYAAGGPVDQGARLFAPALSKELGMPVMVENKTGANATIAGSEVV
RSKPDGMTLWFAASPTITISPNVMTKMPFDPAKDLTPVAPILSYYNVLVVNNNEPYKSVRELVATAKSNPGKLAYGSAGV
GGSNHLGALLFAKRSGIEMNHIPYKGNAPAMTDVIGGQLNMMLDIISTASAYIHSGKVRAIAVTSPQRNASLPDVPTFAE
SGIDGLKGFDVGGWYGVYGPKGMSPELVAKLNKAVNAALQQPDLKKRYKELGYDEWTGAPQKLAERGAQERAMWATVTQG
ITVD
>Mature_323_residues
PASRRLATAALALAPFAFALPAAAQDGQPVRLIVGYAAGGPVDQGARLFAPALSKELGMPVMVENKTGANATIAGSEVVR
SKPDGMTLWFAASPTITISPNVMTKMPFDPAKDLTPVAPILSYYNVLVVNNNEPYKSVRELVATAKSNPGKLAYGSAGVG
GSNHLGALLFAKRSGIEMNHIPYKGNAPAMTDVIGGQLNMMLDIISTASAYIHSGKVRAIAVTSPQRNASLPDVPTFAES
GIDGLKGFDVGGWYGVYGPKGMSPELVAKLNKAVNAALQQPDLKKRYKELGYDEWTGAPQKLAERGAQERAMWATVTQGI
TVD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34084; Mature: 33952

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPASRRLATAALALAPFAFALPAAAQDGQPVRLIVGYAAGGPVDQGARLFAPALSKELGM
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCC
PVMVENKTGANATIAGSEVVRSKPDGMTLWFAASPTITISPNVMTKMPFDPAKDLTPVAP
CEEEECCCCCCEEECCHHHHHCCCCCEEEEEECCCEEEECCCEEEECCCCCCCCCCHHHH
ILSYYNVLVVNNNEPYKSVRELVATAKSNPGKLAYGSAGVGGSNHLGALLFAKRSGIEMN
HHHHCEEEEECCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEEEECCCCCEEC
HIPYKGNAPAMTDVIGGQLNMMLDIISTASAYIHSGKVRAIAVTSPQRNASLPDVPTFAE
CCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHH
SGIDGLKGFDVGGWYGVYGPKGMSPELVAKLNKAVNAALQQPDLKKRYKELGYDEWTGAP
CCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCH
QKLAERGAQERAMWATVTQGITVD
HHHHHCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PASRRLATAALALAPFAFALPAAAQDGQPVRLIVGYAAGGPVDQGARLFAPALSKELGM
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCC
PVMVENKTGANATIAGSEVVRSKPDGMTLWFAASPTITISPNVMTKMPFDPAKDLTPVAP
CEEEECCCCCCEEECCHHHHHCCCCCEEEEEECCCEEEECCCEEEECCCCCCCCCCHHHH
ILSYYNVLVVNNNEPYKSVRELVATAKSNPGKLAYGSAGVGGSNHLGALLFAKRSGIEMN
HHHHCEEEEECCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEEEECCCCCEEC
HIPYKGNAPAMTDVIGGQLNMMLDIISTASAYIHSGKVRAIAVTSPQRNASLPDVPTFAE
CCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHH
SGIDGLKGFDVGGWYGVYGPKGMSPELVAKLNKAVNAALQQPDLKKRYKELGYDEWTGAP
CCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCH
QKLAERGAQERAMWATVTQGITVD
HHHHHCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3299368 [H]