| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is bugT [H]
Identifier: 222109336
GI number: 222109336
Start: 129266
End: 130216
Strand: Direct
Name: bugT [H]
Synonym: Dtpsy_0114
Alternate gene names: 222109336
Gene position: 129266-130216 (Clockwise)
Preceding gene: 222109335
Following gene: 222109337
Centisome position: 3.4
GC content: 68.03
Gene sequence:
>951_bases ATGCCCCTGCGCCGCCATCTGCTTGCCCTCTGCCTGACCGCCCTTCCGCTGGCCACCTGGGCTGCCTGGCCCGAGCGTCC CATCACCATCGTCGTGCCAGCTGCTGCGGGCGGCACCACCGACATCGCGGCGCGCGTGCTGGCCGAGAAGATGGCCAAGG ACCTGGGCACTTCCATCGTCGTGGAGAACAAGGGTGGCGGCGGCGGCAGCATCGGCACCGCGCAGGTGGCGCGCGCGAAG CCCGACGGCTACACGCTGCTCATGGGCAACATCGGCCCGGTGGCGATCAACTTCAGCCTCTACAAGCAGCTCAGCTACAA GGAAAGCGACCTGCGCGGCATCACCAACGTGATCTCCGTACCCAACATCCTCGTGGTCCATGCCGACTCCCCCGTGCGCA GTGCGCAGGAGCTGGTCAGCCTGGCGAAGACGCGCCGCCTCAATGTGTCCACCTCGGGCGTGGGGCAGTCCCCCCACATG TCCTCGGAGATGTTCCGCCAGAAGTCAGGCATCGAAGTGACCCTGGTGCCTTATCCCGGCGCGGCGCCTGCCGTCACGGC GCTGCTGGGGCAGCAGGTGGATTTCATGATCGACAACCTGCCCAGCTCCATGCCGCACATCAAGGCCGGCAAGTTCCGCG CGCTGGCCATCACCAGCGCCGAGCGCTCGGCGCAACTGCCTGATGTGCCGACCATGGCCGAGGCTGGCGTGCCCATGCAG GTCACGGCCTGGTTCGGCCTGCTGGCGCCGACCGGCACGCCCGATGCGGTGGTCGAGCGCCTGCAGCAATCGGCGCGCAA GGCCATGCAAACGCCCGAGGTGCGCCAGCGTTTTGCCGAACTGGGCGGCGTGCCCGGTGGCGAGACGCCTGCCGAGTACG ACGCCTTCATCGCCCAGGAACGCAAGAGCTGGGCACAGATCGTCAAGGCGGCGGGCCTGTCCCTCGAATAA
Upstream 100 bases:
>100_bases TTGCTGAATCACGAAGCGTGTCTCCCATGAAACCCTGAGCCGTCGCCGTCAGCCTGCCCTTATCGTGTGGTGAACCCATT GCACACGACAAGGACACGAC
Downstream 100 bases:
>100_bases CCCGGGCGGGGCGTGCGCCTCCGTCTTTCACTCTCTCCCGATTCCATGCATCCAGACATCGAACACCTGCTGGCCCAGCC CTTCGGCTCGCTGCCCGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MPLRRHLLALCLTALPLATWAAWPERPITIVVPAAAGGTTDIAARVLAEKMAKDLGTSIVVENKGGGGGSIGTAQVARAK PDGYTLLMGNIGPVAINFSLYKQLSYKESDLRGITNVISVPNILVVHADSPVRSAQELVSLAKTRRLNVSTSGVGQSPHM SSEMFRQKSGIEVTLVPYPGAAPAVTALLGQQVDFMIDNLPSSMPHIKAGKFRALAITSAERSAQLPDVPTMAEAGVPMQ VTAWFGLLAPTGTPDAVVERLQQSARKAMQTPEVRQRFAELGGVPGGETPAEYDAFIAQERKSWAQIVKAAGLSLE
Sequences:
>Translated_316_residues MPLRRHLLALCLTALPLATWAAWPERPITIVVPAAAGGTTDIAARVLAEKMAKDLGTSIVVENKGGGGGSIGTAQVARAK PDGYTLLMGNIGPVAINFSLYKQLSYKESDLRGITNVISVPNILVVHADSPVRSAQELVSLAKTRRLNVSTSGVGQSPHM SSEMFRQKSGIEVTLVPYPGAAPAVTALLGQQVDFMIDNLPSSMPHIKAGKFRALAITSAERSAQLPDVPTMAEAGVPMQ VTAWFGLLAPTGTPDAVVERLQQSARKAMQTPEVRQRFAELGGVPGGETPAEYDAFIAQERKSWAQIVKAAGLSLE >Mature_315_residues PLRRHLLALCLTALPLATWAAWPERPITIVVPAAAGGTTDIAARVLAEKMAKDLGTSIVVENKGGGGGSIGTAQVARAKP DGYTLLMGNIGPVAINFSLYKQLSYKESDLRGITNVISVPNILVVHADSPVRSAQELVSLAKTRRLNVSTSGVGQSPHMS SEMFRQKSGIEVTLVPYPGAAPAVTALLGQQVDFMIDNLPSSMPHIKAGKFRALAITSAERSAQLPDVPTMAEAGVPMQV TAWFGLLAPTGTPDAVVERLQQSARKAMQTPEVRQRFAELGGVPGGETPAEYDAFIAQERKSWAQIVKAAGLSLE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33411; Mature: 33280
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLRRHLLALCLTALPLATWAAWPERPITIVVPAAAGGTTDIAARVLAEKMAKDLGTSIV CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEE VENKGGGGGSIGTAQVARAKPDGYTLLMGNIGPVAINFSLYKQLSYKESDLRGITNVISV EECCCCCCCCCCHHHHHHCCCCCEEEEECCCCCEEEEHHHHHHHHCCHHHHHHHHHHHCC PNILVVHADSPVRSAQELVSLAKTRRLNVSTSGVGQSPHMSSEMFRQKSGIEVTLVPYPG CCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCC AAPAVTALLGQQVDFMIDNLPSSMPHIKAGKFRALAITSAERSAQLPDVPTMAEAGVPMQ CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCHHCCCCCCCCCHHHCCCCEE VTAWFGLLAPTGTPDAVVERLQQSARKAMQTPEVRQRFAELGGVPGGETPAEYDAFIAQE EHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH RKSWAQIVKAAGLSLE HHHHHHHHHHCCCCCC >Mature Secondary Structure PLRRHLLALCLTALPLATWAAWPERPITIVVPAAAGGTTDIAARVLAEKMAKDLGTSIV CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEE VENKGGGGGSIGTAQVARAKPDGYTLLMGNIGPVAINFSLYKQLSYKESDLRGITNVISV EECCCCCCCCCCHHHHHHCCCCCEEEEECCCCCEEEEHHHHHHHHCCHHHHHHHHHHHCC PNILVVHADSPVRSAQELVSLAKTRRLNVSTSGVGQSPHMSSEMFRQKSGIEVTLVPYPG CCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCC AAPAVTALLGQQVDFMIDNLPSSMPHIKAGKFRALAITSAERSAQLPDVPTMAEAGVPMQ CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCHHCCCCCCCCCHHHCCCCEE VTAWFGLLAPTGTPDAVVERLQQSARKAMQTPEVRQRFAELGGVPGGETPAEYDAFIAQE EHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH RKSWAQIVKAAGLSLE HHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11111902; 12910271; 2873570 [H]