| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109276
Identifier: 222109276
GI number: 222109276
Start: 54168
End: 54965
Strand: Direct
Name: 222109276
Synonym: Dtpsy_0051
Alternate gene names: NA
Gene position: 54168-54965 (Clockwise)
Preceding gene: 222109275
Following gene: 222109277
Centisome position: 1.43
GC content: 75.06
Gene sequence:
>798_bases ATGCCGCGCCGGCCCCGCCGACTCCATCATCTGCACGCGCCGCCGCCGCGGCGCATCGTCCTGCCCTGGCCGCTGCCGGC GGTGCTGGTGTGGGCGGCGGCGTGGCTGCTGTTCGCGGGCTTGCGTGGCAGCGTGGCCCCGCTGGCGGCGCTCGGGCTGG CCTGCGCCGTGGGTGTGGCGGGCAGCCTGCTGGCGCAGGGCTGGTGGCGCCGCGGCCTGATCGCGCTGGGCTTTCCCTTG TCGGCGGCACTGGGCGGCGCGGTGGCGCTACCGGCCTGGGGCTGGCTGCTGCCGCTGGCGCTGCTGCTGCTGGTGTATCC GCTCAACGCCTGGCGTGATGCGCCGCTGTTTCCCACCCCGCCGGGTGCGCTGCACGGCCTGCAGGACGCCGTGCCGCTGT CCGCGGGTGCGCCCGTGCTGGACGCCGGCTGTGGCCTGGGCGATGGCCTCAAGGCCCTGCGCGCGGCCTATCCGCAGGCG CGGCTGCACGGGCTGGAGTGGAGCGGACCCTTGGCGCTGCTATGCCGGCTGCGCTGCCCCTGGGCGCGCGTGCGGCGCGG CGATATCTGGGCCACGGACTGGGGCGGTTACGACCTTGTGTACGTGTTCCAGCGGCCCGAGAGCATGGCCCGTGTGGCCG CGAAGGCCCGCGCGGAGATGGCGCCGGGCCGCTGGCTCGTGAGTCTGGCGTTCGCCGTGCCGGGCGTGCGCCCCAGCGCG CGGCTGGATTCCTTCGCCGGCCATGCGGTGTGGATCTACCAATTGCCTTTGCCGGCGGACAGTGCTGCGCCACACTAA
Upstream 100 bases:
>100_bases ATGGGCGAGCTGGCCATCCAGTTTGGCTCGCTGGAGGCGCTCAACGGCCTCATCGAGCGCCTGCGGGGCGGCTGACGCCG CATCGTTGCGGCCCGTGCCC
Downstream 100 bases:
>100_bases AACGAAACAACTTGCAAACATCGGTTGCAAAAACTGCCGAATTGGTATGATTTTGCATTCACGTCGGCCACGTCGGTCCC GTACCGGGTGCGCAGACCGC
Product: type 12 methyltransferase
Products: NA
Alternate protein names: Flagellar Motor Protein
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MPRRPRRLHHLHAPPPRRIVLPWPLPAVLVWAAAWLLFAGLRGSVAPLAALGLACAVGVAGSLLAQGWWRRGLIALGFPL SAALGGAVALPAWGWLLPLALLLLVYPLNAWRDAPLFPTPPGALHGLQDAVPLSAGAPVLDAGCGLGDGLKALRAAYPQA RLHGLEWSGPLALLCRLRCPWARVRRGDIWATDWGGYDLVYVFQRPESMARVAAKARAEMAPGRWLVSLAFAVPGVRPSA RLDSFAGHAVWIYQLPLPADSAAPH
Sequences:
>Translated_265_residues MPRRPRRLHHLHAPPPRRIVLPWPLPAVLVWAAAWLLFAGLRGSVAPLAALGLACAVGVAGSLLAQGWWRRGLIALGFPL SAALGGAVALPAWGWLLPLALLLLVYPLNAWRDAPLFPTPPGALHGLQDAVPLSAGAPVLDAGCGLGDGLKALRAAYPQA RLHGLEWSGPLALLCRLRCPWARVRRGDIWATDWGGYDLVYVFQRPESMARVAAKARAEMAPGRWLVSLAFAVPGVRPSA RLDSFAGHAVWIYQLPLPADSAAPH >Mature_264_residues PRRPRRLHHLHAPPPRRIVLPWPLPAVLVWAAAWLLFAGLRGSVAPLAALGLACAVGVAGSLLAQGWWRRGLIALGFPLS AALGGAVALPAWGWLLPLALLLLVYPLNAWRDAPLFPTPPGALHGLQDAVPLSAGAPVLDAGCGLGDGLKALRAAYPQAR LHGLEWSGPLALLCRLRCPWARVRRGDIWATDWGGYDLVYVFQRPESMARVAAKARAEMAPGRWLVSLAFAVPGVRPSAR LDSFAGHAVWIYQLPLPADSAAPH
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28344; Mature: 28213
Theoretical pI: Translated: 11.39; Mature: 11.39
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRPRRLHHLHAPPPRRIVLPWPLPAVLVWAAAWLLFAGLRGSVAPLAALGLACAVGVA CCCCCCHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH GSLLAQGWWRRGLIALGFPLSAALGGAVALPAWGWLLPLALLLLVYPLNAWRDAPLFPTP HHHHHHHHHHCCEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PGALHGLQDAVPLSAGAPVLDAGCGLGDGLKALRAAYPQARLHGLEWSGPLALLCRLRCP CHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHCCC WARVRRGDIWATDWGGYDLVYVFQRPESMARVAAKARAEMAPGRWLVSLAFAVPGVRPSA HHHCCCCCEEEECCCCCEEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCH RLDSFAGHAVWIYQLPLPADSAAPH HHHHCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure PRRPRRLHHLHAPPPRRIVLPWPLPAVLVWAAAWLLFAGLRGSVAPLAALGLACAVGVA CCCCCHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH GSLLAQGWWRRGLIALGFPLSAALGGAVALPAWGWLLPLALLLLVYPLNAWRDAPLFPTP HHHHHHHHHHCCEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PGALHGLQDAVPLSAGAPVLDAGCGLGDGLKALRAAYPQARLHGLEWSGPLALLCRLRCP CHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHCCC WARVRRGDIWATDWGGYDLVYVFQRPESMARVAAKARAEMAPGRWLVSLAFAVPGVRPSA HHHCCCCCEEEECCCCCEEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCH RLDSFAGHAVWIYQLPLPADSAAPH HHHHCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA