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The map label for this gene is tse [H]

Identifier: 222109263

GI number: 222109263

Start: 42422

End: 44074

Strand: Direct

Name: tse [H]

Synonym: Dtpsy_0038

Alternate gene names: 222109263

Gene position: 42422-44074 (Clockwise)

Preceding gene: 222109262

Following gene: 222109270

Centisome position: 1.12

GC content: 70.11

Gene sequence:

>1653_bases
ATGAATATTTACGCGCTCATGCGGCTCTTCACGATCCGCCTGCGAATGATCGGCGCCATTGGCGTGGTACTGGGCCTGTT
GGGCCTGCTGGGCGGTGCCGGCATGCTGGGCATGTTCCGCATCCACGGGCTGGCCCAGGACTTCGTCAGCCAGCCCCATG
CCGCGGTGAAGCTGATGGGCCAGCTGCGCAGCGAGATGGGTGAGATCCGCCAGCATGAGAAGGACATGATCATCCACTAC
GAGCGCCCCGAGTCGGTGCGCGCCGCGCACGACCGGTGGCTGGCGTCGCTGGACCGTGCGGGCAAGGTCACGGCCACGCT
GGGCCAGATCTGGCAGGGCGAGGACCTGGCCGAGGCGAAGGACGTCGCCAAGCACCTGGTGGCCTACCGCGAGCAGTTTG
CGCACGTGGCACGCCAGCTGGAGGCCGGCGGCTACGACACCGCCACGATCGCCAACCGCATGAGCGGCAAGGCGGTGGAG
CAGTTCAACATCGCCACCGAGAAGGTGGCCGCGCTGGACAAGCGCCTGGCCGCCGAGGTGGACAGCGCCATTGCGCACCA
GGACCGCGTCACCGACCAGACCAAGTGGCTGTTCGCCCTGGCGGTGCTGATCACTGTGGTGGTGGTGGTGCCGCTCACGC
TGCTGAACATGGTGTCCATCTGCCGCCCGCTGGAAGTGGCCCGCGCGATGGCACAGGCGATCGCCGGGGGCGACCTGTCT
CAGCGCATCCACGTGGAAGGCCGTGACGAGGCGGCCGACCTGCAGCGCGCGCTGCTGGACATGCAAACCGGCCTGGGCGC
GATGGTGGCGCAGGTGCGCGACGCGAGCAGCAACATCGCCACGGCCAGCCAGGAGATCGCCACCGGCAACCAGGACCTGT
CCAGCCGCACCGAGCAGACCGCCAGCAACGCACAGGAAGCCGTGGCCGCGCTCTCGCAGCTCACCGCCACGGTGCAGCAG
ACGGCGTCGTCCTCGCAGGTGGCCAACCAGCTCGTCACCTCGGCCTCGGGCATCGCCACGCGCGGTGGCCAGGTGGTGCA
GCAGGCGGTGAACAGCATGCACGAGATCTCCTCCTCCAGCCGCAAGATCGGCGACATCATCGGCCTGATCGACTCCATCG
CCTTCCAGACCAACATCCTCGCGCTGAACGCGGCCGTGGAAGCGGCGCGCGCGGGCGAGCAGGGCCGCGGCTTTGCAGTG
GTGGCGGGCGAGGTGCGCAGCCTGGCGCAGCGCAGCGCGGCCGCAGCCAGCGAGATCAAGGGCCTGATCAGCTCCAGCGT
GACGGCCGTGGACGGCGGCGTGCGCCACGTGGAAGATGCCGGCAAGGCCATGCAGGAGATCGTGTCCAGCGTGCAGCGCG
TGACCGACATCATTGGCGAGATCAACTCCGCCGCCTCCGAGCAGGCGGGCGGCATCGGCGAGGTCAACGCCTCCGTGGGC
GAGATCGACCGCATGACGCAGCAGAACGCCGCGCTGGTGGAAGAGTCCGCCGCGGCGGCCGAGTCGCTGCGCGAGCAGGC
CGCCCGCCTGTCGCAGGTGGTGAGCCAGTTCCAGTTGGCCGACGACGGCCACGCGCCCGCGGCCTTCACGCGCAGCGGCG
CGCCGGCCCCCGCGCTGCGGGGCGGCGACACGCCGCGCCTGAGCGCCGCTTGA

Upstream 100 bases:

>100_bases
TAAGTCACGCGCAAGCCATTGCCTGACAGGGTGACGGATTGCGTGACGCACATCATGGGAGGGTGGCCCGCCGGGGGCTG
CACACGACAAGGAAACGGTG

Downstream 100 bases:

>100_bases
GCGCTGCATGACGCACGCGGCGGCCGGGCGCCGCCGCCAGTTTTCAACAAACCCTCCTTGCGCACCTTCGGGTGCGTTTT
TTTTGCCCCTTGGTTGTGCG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 550; Mature: 550

Protein sequence:

>550_residues
MNIYALMRLFTIRLRMIGAIGVVLGLLGLLGGAGMLGMFRIHGLAQDFVSQPHAAVKLMGQLRSEMGEIRQHEKDMIIHY
ERPESVRAAHDRWLASLDRAGKVTATLGQIWQGEDLAEAKDVAKHLVAYREQFAHVARQLEAGGYDTATIANRMSGKAVE
QFNIATEKVAALDKRLAAEVDSAIAHQDRVTDQTKWLFALAVLITVVVVVPLTLLNMVSICRPLEVARAMAQAIAGGDLS
QRIHVEGRDEAADLQRALLDMQTGLGAMVAQVRDASSNIATASQEIATGNQDLSSRTEQTASNAQEAVAALSQLTATVQQ
TASSSQVANQLVTSASGIATRGGQVVQQAVNSMHEISSSSRKIGDIIGLIDSIAFQTNILALNAAVEAARAGEQGRGFAV
VAGEVRSLAQRSAAAASEIKGLISSSVTAVDGGVRHVEDAGKAMQEIVSSVQRVTDIIGEINSAASEQAGGIGEVNASVG
EIDRMTQQNAALVEESAAAAESLREQAARLSQVVSQFQLADDGHAPAAFTRSGAPAPALRGGDTPRLSAA

Sequences:

>Translated_550_residues
MNIYALMRLFTIRLRMIGAIGVVLGLLGLLGGAGMLGMFRIHGLAQDFVSQPHAAVKLMGQLRSEMGEIRQHEKDMIIHY
ERPESVRAAHDRWLASLDRAGKVTATLGQIWQGEDLAEAKDVAKHLVAYREQFAHVARQLEAGGYDTATIANRMSGKAVE
QFNIATEKVAALDKRLAAEVDSAIAHQDRVTDQTKWLFALAVLITVVVVVPLTLLNMVSICRPLEVARAMAQAIAGGDLS
QRIHVEGRDEAADLQRALLDMQTGLGAMVAQVRDASSNIATASQEIATGNQDLSSRTEQTASNAQEAVAALSQLTATVQQ
TASSSQVANQLVTSASGIATRGGQVVQQAVNSMHEISSSSRKIGDIIGLIDSIAFQTNILALNAAVEAARAGEQGRGFAV
VAGEVRSLAQRSAAAASEIKGLISSSVTAVDGGVRHVEDAGKAMQEIVSSVQRVTDIIGEINSAASEQAGGIGEVNASVG
EIDRMTQQNAALVEESAAAAESLREQAARLSQVVSQFQLADDGHAPAAFTRSGAPAPALRGGDTPRLSAA
>Mature_550_residues
MNIYALMRLFTIRLRMIGAIGVVLGLLGLLGGAGMLGMFRIHGLAQDFVSQPHAAVKLMGQLRSEMGEIRQHEKDMIIHY
ERPESVRAAHDRWLASLDRAGKVTATLGQIWQGEDLAEAKDVAKHLVAYREQFAHVARQLEAGGYDTATIANRMSGKAVE
QFNIATEKVAALDKRLAAEVDSAIAHQDRVTDQTKWLFALAVLITVVVVVPLTLLNMVSICRPLEVARAMAQAIAGGDLS
QRIHVEGRDEAADLQRALLDMQTGLGAMVAQVRDASSNIATASQEIATGNQDLSSRTEQTASNAQEAVAALSQLTATVQQ
TASSSQVANQLVTSASGIATRGGQVVQQAVNSMHEISSSSRKIGDIIGLIDSIAFQTNILALNAAVEAARAGEQGRGFAV
VAGEVRSLAQRSAAAASEIKGLISSSVTAVDGGVRHVEDAGKAMQEIVSSVQRVTDIIGEINSAASEQAGGIGEVNASVG
EIDRMTQQNAALVEESAAAAESLREQAARLSQVVSQFQLADDGHAPAAFTRSGAPAPALRGGDTPRLSAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=572, Percent_Identity=40.3846153846154, Blast_Score=289, Evalue=3e-79,
Organism=Escherichia coli, GI2367378, Length=356, Percent_Identity=51.123595505618, Blast_Score=283, Evalue=2e-77,
Organism=Escherichia coli, GI1787690, Length=340, Percent_Identity=49.7058823529412, Blast_Score=275, Evalue=7e-75,
Organism=Escherichia coli, GI1788194, Length=325, Percent_Identity=49.2307692307692, Blast_Score=261, Evalue=1e-70,
Organism=Escherichia coli, GI1789453, Length=324, Percent_Identity=39.1975308641975, Blast_Score=216, Evalue=4e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 57839; Mature: 57839

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]