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The map label for this gene is rdgC [H]

Identifier: 222109251

GI number: 222109251

Start: 28616

End: 29593

Strand: Direct

Name: rdgC [H]

Synonym: Dtpsy_0026

Alternate gene names: 222109251

Gene position: 28616-29593 (Clockwise)

Preceding gene: 222109248

Following gene: 222109253

Centisome position: 0.75

GC content: 69.43

Gene sequence:

>978_bases
GTGTTCAAGAACATGATCGTGTACCGCATTGCCCCCGAGTGGCAGGTGGAGCTGACCCAGCTGGAGGAAGCGCTGGCCAA
GGCGCCCTTCCAGGAGTGCGGCGCCACGCAGGAAAAGTCCAGCGGCTGGGTGCCCCCGCGCGGCGAGGCCCATGGGCTGC
TGGCCGAGAGCGTGGGCGGCCACTGGATGCTGCGCTTCCAATGGGAAGCCAAGATGCTCCCGGCCACCGTGCTGGCGCGC
AAGGTGAAGGAAAAGGCCGCGCAGATCGAGCAGCAGACCGGCCGCAAGCCCGGCAAGAAGGAAACCAAGGAGCTCAAGGA
AGAGGCCAAGCTGGACCTGCTGCCCATGGCCTTCACCAAGCAGGGCGGCACCTGGGTGTGGATCGACCCACAGGCGCACT
TGCTGGTGCTGGACACGGGCGCCCAAGGCCGTGCCGACGAGGTGGTGAGCCTGCTGGTGGAGCACCTGCCCGGCCTGTCG
CTGGCGCTGCTGGACACGCAGACCAGCCCTCAGGCGGCGATGGCGCTGTGGCTCAAGGAGCAGGAGCCGCCGGCGGGCTT
TTCCATCGACCGCGAGTGCGAGCTGAAGGCGCCCGACGAGACCAAGGCCGTGGTGCGCTATGCCCGCCACCCGCTGGACA
TCGAGGAAGTGCAGGGCCACATCGAGGCGGGCAAGCTGCCCACCAAGCTCGCCATGAGCTGGGACGACCGCGTGAGCTTC
GTGCTGACCGAGGGGCTGCAGCTCAAGAAGGTGGCGTTCCTGGACACGGTGTTCGAGGGCCAGGCGCAGGACGAGGGCGG
CTTCGATGCCGACGTGGCGATCGCCACGGGCGAGCTGTCGCAGTTGATTCCCGACCTGATCGCGGCGCTGGGCGGCGAGG
GGCGCACGAGCCTGGGGGGCGCTGCTGCCGCCCCCGCACCAACCGCCGGGGCCTTGCATGCCGCGGCCAGCGGCCCCGAC
GACGACGCGCCGTTCTGA

Upstream 100 bases:

>100_bases
TTATCCAATAAGCGCTGGCAGCTATCAAATCAGGACCATTCACCGCCCCGCCCGTCGTGCAGCCCTGGCGCGGGGCCGGC
ATTTCAAAAGGAATCTCCCC

Downstream 100 bases:

>100_bases
CGAAAAAAAAGCCCACGCGCCGTTGCCGGTGCATGGGCTTTGGGGCCTGGCTTGAAGGCCGCTGCCGGATCAGGCCCGGT
GGCGGGCCAGCACGACGGGT

Product: recombination associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MFKNMIVYRIAPEWQVELTQLEEALAKAPFQECGATQEKSSGWVPPRGEAHGLLAESVGGHWMLRFQWEAKMLPATVLAR
KVKEKAAQIEQQTGRKPGKKETKELKEEAKLDLLPMAFTKQGGTWVWIDPQAHLLVLDTGAQGRADEVVSLLVEHLPGLS
LALLDTQTSPQAAMALWLKEQEPPAGFSIDRECELKAPDETKAVVRYARHPLDIEEVQGHIEAGKLPTKLAMSWDDRVSF
VLTEGLQLKKVAFLDTVFEGQAQDEGGFDADVAIATGELSQLIPDLIAALGGEGRTSLGGAAAAPAPTAGALHAAASGPD
DDAPF

Sequences:

>Translated_325_residues
MFKNMIVYRIAPEWQVELTQLEEALAKAPFQECGATQEKSSGWVPPRGEAHGLLAESVGGHWMLRFQWEAKMLPATVLAR
KVKEKAAQIEQQTGRKPGKKETKELKEEAKLDLLPMAFTKQGGTWVWIDPQAHLLVLDTGAQGRADEVVSLLVEHLPGLS
LALLDTQTSPQAAMALWLKEQEPPAGFSIDRECELKAPDETKAVVRYARHPLDIEEVQGHIEAGKLPTKLAMSWDDRVSF
VLTEGLQLKKVAFLDTVFEGQAQDEGGFDADVAIATGELSQLIPDLIAALGGEGRTSLGGAAAAPAPTAGALHAAASGPD
DDAPF
>Mature_325_residues
MFKNMIVYRIAPEWQVELTQLEEALAKAPFQECGATQEKSSGWVPPRGEAHGLLAESVGGHWMLRFQWEAKMLPATVLAR
KVKEKAAQIEQQTGRKPGKKETKELKEEAKLDLLPMAFTKQGGTWVWIDPQAHLLVLDTGAQGRADEVVSLLVEHLPGLS
LALLDTQTSPQAAMALWLKEQEPPAGFSIDRECELKAPDETKAVVRYARHPLDIEEVQGHIEAGKLPTKLAMSWDDRVSF
VLTEGLQLKKVAFLDTVFEGQAQDEGGFDADVAIATGELSQLIPDLIAALGGEGRTSLGGAAAAPAPTAGALHAAASGPD
DDAPF

Specific function: May be involved in recombination [H]

COG id: COG2974

COG function: function code L; DNA recombination-dependent growth factor C

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdgC family [H]

Homologues:

Organism=Escherichia coli, GI1786592, Length=302, Percent_Identity=34.1059602649007, Blast_Score=177, Evalue=8e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007476 [H]

Pfam domain/function: PF04381 RdgC [H]

EC number: NA

Molecular weight: Translated: 35111; Mature: 35111

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKNMIVYRIAPEWQVELTQLEEALAKAPFQECGATQEKSSGWVPPRGEAHGLLAESVGG
CCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCC
HWMLRFQWEAKMLPATVLARKVKEKAAQIEQQTGRKPGKKETKELKEEAKLDLLPMAFTK
EEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEHEEEC
QGGTWVWIDPQAHLLVLDTGAQGRADEVVSLLVEHLPGLSLALLDTQTSPQAAMALWLKE
CCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHC
QEPPAGFSIDRECELKAPDETKAVVRYARHPLDIEEVQGHIEAGKLPTKLAMSWDDRVSF
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCHHHCCCCCHHEECCCCCCEEE
VLTEGLQLKKVAFLDTVFEGQAQDEGGFDADVAIATGELSQLIPDLIAALGGEGRTSLGG
EECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCC
AAAAPAPTAGALHAAASGPDDDAPF
CCCCCCCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFKNMIVYRIAPEWQVELTQLEEALAKAPFQECGATQEKSSGWVPPRGEAHGLLAESVGG
CCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCC
HWMLRFQWEAKMLPATVLARKVKEKAAQIEQQTGRKPGKKETKELKEEAKLDLLPMAFTK
EEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEHEEEC
QGGTWVWIDPQAHLLVLDTGAQGRADEVVSLLVEHLPGLSLALLDTQTSPQAAMALWLKE
CCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHC
QEPPAGFSIDRECELKAPDETKAVVRYARHPLDIEEVQGHIEAGKLPTKLAMSWDDRVSF
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCHHHCCCCCHHEECCCCCCEEE
VLTEGLQLKKVAFLDTVFEGQAQDEGGFDADVAIATGELSQLIPDLIAALGGEGRTSLGG
EECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCC
AAAAPAPTAGALHAAASGPDDDAPF
CCCCCCCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA