Definition Agrobacterium radiobacter K84 chromosome 2, complete genome.
Accession NC_011983
Length 2,650,913

Click here to switch to the map view.

The map label for this gene is hrcQ

Identifier: 222082188

GI number:

Start: 1528644

End: 1529654

Strand: Direct

Name: hrcQ

Synonym: Arad_8765

Alternate gene names: NA

Gene position: NA

Preceding gene: 222082187

Following gene: 222082189

Centisome position: NA

GC content: NA

Gene sequence:

>1011_bases
ATGAACGCGGCCTCTGATCACCTCTCGCCCGCGGACCTATCTTCCGGACATGTAATCCCGCAGGCGCGCGAACCATGGCA
GATACCCTTCGGCGACAGCACGCTGGCGATCCGGCCGCTTGCTCCTGATATCGCGATGGACAGGATGGGCGATCCGGCGC
GTCTCAGCTTGACCATTGCGGGAGAGCCGGTCGAACTCCTGGCGCCGGGCGCCACCCTCAAATTGCTTGTCGACCGGTTG
GAGCCGCTGGCGCAATGGGACCGTCTTTCACCACCTGCCTGTGCAGCCGTGCTGGAATATCTGCTGTCGGATGTTCTCGA
GAGGGTCGAAACGCAGACCGGCAAGCAGATCGCCTTGACGGAAGTCGGCCCTTCGGCCCCCCAAGGACTACCTGGCAATT
TCGGTTTTGAAGTCACATGGCAAGGGCGTTCCTTGCCGCTATGTGGCTATTTTCCCGAGCCGATGCTGATGGGTCTGAGG
CGATGGGCCAATCGCCTCCCGCGCCGCCGCCTTGCCGCTCTGACGGCTGAGGTTGCCATCCGGCGCGGCTATGCGGTTAT
CTCCGCGCGCGAACTCAAGCAGCTTTCGGTCGGCGACGGGATCGTGATCGATCCTATGGCGGCCGAGACCGCAATAGCCG
TCACCGGCGAGCATTTTCTGGCGGCCTGCACGCTGTCGAACGAGGGCGCGACGCTGTGCGGACCGTTGCTGACACGGCCA
AATGGACCAATGAGGCACTTCATGAGCAATGAAACAATCGACCAGGATTTACAGGGGGCGCCGACGATCGCGTCTATCGG
CGACATTCCCGTCAAGCTTGTCTTCGATATAGCCCGGATCGAGCTGCCGCTATCGGAACTGGAGAGCATTGCGGAAGGCC
ATGTCTTCCCGCTCGACCGTCCGAAACAGGACGCGGTGGAGATCGTCACCCAGGGACGGATCATCGGCCGCGGCGAGATC
GTCACACTCGACGGCCTCACGGCCGTCCGCGTCACCGTGTTGCACGTTTGA

Upstream 100 bases:

>100_bases
CCGTGCGCAAGCGAACTCTGATCGGGAATTTTCTTTTCAGCGGACATGCGAAAGCGCCGTCCTTCGAAGAAACCGTCGCC
AGACTGCAGGAGCTGGCCCG

Downstream 100 bases:

>100_bases
TGGAAACCGCCTTTCCCTTGACCCAGGGGCTGGCGGCGATGGCCGCCATCTCGATCTTGCCCGTCATCGCGGTCGTGGCC
ACCTCCTTTACCAAGATCGC

Product: type III secretion apparatus protein, YscQ/HrcQ family

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>336_residues
MNAASDHLSPADLSSGHVIPQAREPWQIPFGDSTLAIRPLAPDIAMDRMGDPARLSLTIAGEPVELLAPGATLKLLVDRL
EPLAQWDRLSPPACAAVLEYLLSDVLERVETQTGKQIALTEVGPSAPQGLPGNFGFEVTWQGRSLPLCGYFPEPMLMGLR
RWANRLPRRRLAALTAEVAIRRGYAVISARELKQLSVGDGIVIDPMAAETAIAVTGEHFLAACTLSNEGATLCGPLLTRP
NGPMRHFMSNETIDQDLQGAPTIASIGDIPVKLVFDIARIELPLSELESIAEGHVFPLDRPKQDAVEIVTQGRIIGRGEI
VTLDGLTAVRVTVLHV

Sequences:
NA

Specific function: NA

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA