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The map label for this gene is oruR [H]

Identifier: 222102932

GI number: 222102932

Start: 619051

End: 620067

Strand: Reverse

Name: oruR [H]

Synonym: Avi_7688

Alternate gene names: 222102932

Gene position: 620067-619051 (Counterclockwise)

Preceding gene: 222102937

Following gene: 222102931

Centisome position: 98.15

GC content: 58.8

Gene sequence:

>1017_bases
ATGACGCAGGCGAGAACGCCCTCCGGCTTTGCCTTGGCTATTGTTTTAGCCTATCAAAAGCGCGGGATGACAGAGCAGCC
AGCGCTTCTCGCGGCAGGCATTGATCCCGCCACCCTGCATGCAGATGGCAGAATAACAGCCGATCAACTCGAACGCCTGT
CAGATCACGCCATGCGCGAGCTGGACGATGAGGCGCTTGGCTGGTTTTCCCACCGCCTGCCGTGGGGCAGTTATGGCATG
CTGTGCCGCGCATCACTGCCCTCGGCCACGCTGGGCATTGCCATCACGCGATGGTGCCGCCATCATAACCTCATCACGCA
GGATGTTACGCTCAGTCTCGAAACGCGACGCAATCTGGCTGAGGTTCGGATCGAAGAGAAAAGCGAACTTGGCGCTTTTC
GGGAGTTTTGTCTGGTCAGCCTGCTGCGCAATCTTCAGGGCGTGGCCTCGTGGCTCGGCGACACGCGCATTCCCTTGGTT
GATGTTGCGTTTCCATTCGACGCACCAGCGCATGCTGAAAGCTACCGCTATCTCTTCAATGGCCCTGCGTCGTTTGGCGC
GGATCAGGCAAGCCTTCGTTTTGATGCTGCCTATCTGGGCCTGCCCGTCCTGCGCGATGATGCTGCCTTGCGACAAATGC
TGAGGCGGCCCTTGCCGCTGATGGTGCGTCAGTATCGGCGCGACCGTCTGCTCTCGCGCGAAATTCTCCGCTTGCTGAAT
GACATGCCAGCAGCAGGGATCGATGACCTGGCAGAAAAGCTCAATCTGTCAACCCGCAGCCTTCACCGCCATATCAAACA
GGAAGGCACATCGTTTCAGGCGCTGAAAGATCTGTCGCGCCAACGGCTGGCAGAGCGACTGCTGGCTTCCACCCAGTGGC
CGATCAAGCGCATTGCCCGCGAATGTGGCTTTGATGCAGAGGCAAGTTTTGTGCGTGCATTCAAGTCCTGGACTGGCCAG
ACCCCACGGGCTTTCGCGGTTGCTGCAAGGCAGGGTACATCATCGCATAAGTCGTGA

Upstream 100 bases:

>100_bases
CCGCCGCGCCGGTCATTATTGACTTTGTGGCAGTCTAGCGATTGAAGATAGGCAAATCCCGTCAAAGAATTGATGGATAG
TGCCAGAGGGAGGCAGGTTC

Downstream 100 bases:

>100_bases
AAGCTGCATCGCACCCGTGAGGCAGCCTTGTCGTTGTCCGAATGCATCAATTCTTTGGCAGGATTTGATCCTTATTCGGC
TGTAGCTTTTGCGAAGATCA

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MTQARTPSGFALAIVLAYQKRGMTEQPALLAAGIDPATLHADGRITADQLERLSDHAMRELDDEALGWFSHRLPWGSYGM
LCRASLPSATLGIAITRWCRHHNLITQDVTLSLETRRNLAEVRIEEKSELGAFREFCLVSLLRNLQGVASWLGDTRIPLV
DVAFPFDAPAHAESYRYLFNGPASFGADQASLRFDAAYLGLPVLRDDAALRQMLRRPLPLMVRQYRRDRLLSREILRLLN
DMPAAGIDDLAEKLNLSTRSLHRHIKQEGTSFQALKDLSRQRLAERLLASTQWPIKRIARECGFDAEASFVRAFKSWTGQ
TPRAFAVAARQGTSSHKS

Sequences:

>Translated_338_residues
MTQARTPSGFALAIVLAYQKRGMTEQPALLAAGIDPATLHADGRITADQLERLSDHAMRELDDEALGWFSHRLPWGSYGM
LCRASLPSATLGIAITRWCRHHNLITQDVTLSLETRRNLAEVRIEEKSELGAFREFCLVSLLRNLQGVASWLGDTRIPLV
DVAFPFDAPAHAESYRYLFNGPASFGADQASLRFDAAYLGLPVLRDDAALRQMLRRPLPLMVRQYRRDRLLSREILRLLN
DMPAAGIDDLAEKLNLSTRSLHRHIKQEGTSFQALKDLSRQRLAERLLASTQWPIKRIARECGFDAEASFVRAFKSWTGQ
TPRAFAVAARQGTSSHKS
>Mature_337_residues
TQARTPSGFALAIVLAYQKRGMTEQPALLAAGIDPATLHADGRITADQLERLSDHAMRELDDEALGWFSHRLPWGSYGML
CRASLPSATLGIAITRWCRHHNLITQDVTLSLETRRNLAEVRIEEKSELGAFREFCLVSLLRNLQGVASWLGDTRIPLVD
VAFPFDAPAHAESYRYLFNGPASFGADQASLRFDAAYLGLPVLRDDAALRQMLRRPLPLMVRQYRRDRLLSREILRLLND
MPAAGIDDLAEKLNLSTRSLHRHIKQEGTSFQALKDLSRQRLAERLLASTQWPIKRIARECGFDAEASFVRAFKSWTGQT
PRAFAVAARQGTSSHKS

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37934; Mature: 37803

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQARTPSGFALAIVLAYQKRGMTEQPALLAAGIDPATLHADGRITADQLERLSDHAMRE
CCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCEECCCCCCCHHHHHHHHHHHHHH
LDDEALGWFSHRLPWGSYGMLCRASLPSATLGIAITRWCRHHNLITQDVTLSLETRRNLA
HHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCHHHEEEHHHHHHHH
EVRIEEKSELGAFREFCLVSLLRNLQGVASWLGDTRIPLVDVAFPFDAPAHAESYRYLFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHCC
GPASFGADQASLRFDAAYLGLPVLRDDAALRQMLRRPLPLMVRQYRRDRLLSREILRLLN
CCCCCCCCCHHHEEHHHHHCCCHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
DMPAAGIDDLAEKLNLSTRSLHRHIKQEGTSFQALKDLSRQRLAERLLASTQWPIKRIAR
CCCCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ECGFDAEASFVRAFKSWTGQTPRAFAVAARQGTSSHKS
HCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TQARTPSGFALAIVLAYQKRGMTEQPALLAAGIDPATLHADGRITADQLERLSDHAMRE
CCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCEECCCCCCCHHHHHHHHHHHHHH
LDDEALGWFSHRLPWGSYGMLCRASLPSATLGIAITRWCRHHNLITQDVTLSLETRRNLA
HHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCHHHEEEHHHHHHHH
EVRIEEKSELGAFREFCLVSLLRNLQGVASWLGDTRIPLVDVAFPFDAPAHAESYRYLFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHCC
GPASFGADQASLRFDAAYLGLPVLRDDAALRQMLRRPLPLMVRQYRRDRLLSREILRLLN
CCCCCCCCCHHHEEHHHHHCCCHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
DMPAAGIDDLAEKLNLSTRSLHRHIKQEGTSFQALKDLSRQRLAERLLASTQWPIKRIAR
CCCCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ECGFDAEASFVRAFKSWTGQTPRAFAVAARQGTSSHKS
HCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]