The gene/protein map for NC_011981 is currently unavailable.
Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

Click here to switch to the map view.

The map label for this gene is 222102924

Identifier: 222102924

GI number: 222102924

Start: 608583

End: 609776

Strand: Direct

Name: 222102924

Synonym: Avi_7679

Alternate gene names: NA

Gene position: 608583-609776 (Clockwise)

Preceding gene: 222102923

Following gene: 222102925

Centisome position: 96.33

GC content: 56.2

Gene sequence:

>1194_bases
ATGACCAATCTTGATACAAAGGGTACCCGCACAGCCCTTATTGTCGGTCATGCGGCCGGTATGATCGATATGGTCTCTCT
TCCCATTTGGGTCGGTGGACTGGTCGGTGGCTATGGCTATTCATCCGCTCAAGCCGGAGGACTTGTCACCACATTTCTGA
TTGGGGTGGTGATTGCCAGTTGCGGCCTTGCGACGCTTTTCCATCGCTTTTCCATGCGTTGGGTGCCCGGTGCAGGCTTT
AGCGGGGCTGCGCTGGCGTTCGCAGCACTCTGGATGGCATCAGGTTTCGGCAATTTTCTCGCACTTCACCTCTGTGCCGG
TCTTTGCATCGGCACGGCTTTGTCAGCGGTTCATGGAACCATTGGCCGCACAAGCAATGCTCATCGCACATTTGCTTATG
CCACCATTGGCTTTGGCATCTTCAGCGTTATCTTCATGGGCTTTGCCACGCAGGTGATTGCCGCAATGCAGCCACGCAAC
CTGTTCTTGATTTTTGCCGGGGTTATGGCGATCGCTGCCGCAGTCAATTGGTTGCTTTTCCCCCACAGCGCCACCATGCC
GAAGGCGGAGAAAAAACCATCGCCCAATTCCGGTCGCGTGCCGCGTTTTGAACCCGTCGTCTGGTTTCTCATCGCCGCTC
TGCTGGGCATGAACTTCAATCAGGCCATGAATTTCAGCTTTGTTGAGCGCATTGCCAGTGACCATGATTGGCCAACATCC
ACCATCAACGGCATTCTTGTGGGCGTTGCCTTTCTCAGCCTCATTCCGGCCCCGCTCGCAGTGTTTTTTGAAAAAAAGCT
TCATCCGGTTTATGTGGGCATAGTAGGCGTGCTGCTTCAGGCCGCTCTTTCGCTGGGCATAACCCATGCGCTCGACGTTC
CCGGTTTTGCCGCCTCGGCAATCTTCATTCCCTTTGTCATGATCTTCTCGCACACATTTCTCTTCGGACTCATGTCGCGC
GTGGAACCAACTGGCCGAGCAGTGGCGGCCAATCCGGCCATTACCATGGGCGGCGGAGCGCTTGGGCCTCTGGTTGGCGG
CATTCTGGTCCAGACAATGGGCTATCATGGCCTCAGCCTTGCAACCGCTCTGGTGGCCACCTGTGTTGTGGCGGGACTAA
TGCTGGTGCTGATGCGCCTGTTGCCCTCGCACGCCAGCAACGCACTAGCCCCAAAAAGGCACTGGCCATTGTGA

Upstream 100 bases:

>100_bases
TGCGGCAGCTTGGCAAGCGGTTGGCAGCGATGCTCTGTCCCCAGCAGCCTATATTGGCTCAGCGCCCGATTGGTGAACTC
TCCGCAGGCGGGAGGATCGC

Downstream 100 bases:

>100_bases
CCCGTCACGACCAATAGGCTTAAGCCTGCAAGGCAAATGCCGCGTGCCCAAAAGCCACGCAACAACAGAAACATCTGGAG
TGAGCCGGGCCGAAGAAAAA

Product: Permeases of the major facilitator superfamily

Products: NA

Alternate protein names: Facilitator Superfamily Permease; Facilitator Superfamily Protein; Permease; Permeases Of Facilitator Superfamily

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MTNLDTKGTRTALIVGHAAGMIDMVSLPIWVGGLVGGYGYSSAQAGGLVTTFLIGVVIASCGLATLFHRFSMRWVPGAGF
SGAALAFAALWMASGFGNFLALHLCAGLCIGTALSAVHGTIGRTSNAHRTFAYATIGFGIFSVIFMGFATQVIAAMQPRN
LFLIFAGVMAIAAAVNWLLFPHSATMPKAEKKPSPNSGRVPRFEPVVWFLIAALLGMNFNQAMNFSFVERIASDHDWPTS
TINGILVGVAFLSLIPAPLAVFFEKKLHPVYVGIVGVLLQAALSLGITHALDVPGFAASAIFIPFVMIFSHTFLFGLMSR
VEPTGRAVAANPAITMGGGALGPLVGGILVQTMGYHGLSLATALVATCVVAGLMLVLMRLLPSHASNALAPKRHWPL

Sequences:

>Translated_397_residues
MTNLDTKGTRTALIVGHAAGMIDMVSLPIWVGGLVGGYGYSSAQAGGLVTTFLIGVVIASCGLATLFHRFSMRWVPGAGF
SGAALAFAALWMASGFGNFLALHLCAGLCIGTALSAVHGTIGRTSNAHRTFAYATIGFGIFSVIFMGFATQVIAAMQPRN
LFLIFAGVMAIAAAVNWLLFPHSATMPKAEKKPSPNSGRVPRFEPVVWFLIAALLGMNFNQAMNFSFVERIASDHDWPTS
TINGILVGVAFLSLIPAPLAVFFEKKLHPVYVGIVGVLLQAALSLGITHALDVPGFAASAIFIPFVMIFSHTFLFGLMSR
VEPTGRAVAANPAITMGGGALGPLVGGILVQTMGYHGLSLATALVATCVVAGLMLVLMRLLPSHASNALAPKRHWPL
>Mature_396_residues
TNLDTKGTRTALIVGHAAGMIDMVSLPIWVGGLVGGYGYSSAQAGGLVTTFLIGVVIASCGLATLFHRFSMRWVPGAGFS
GAALAFAALWMASGFGNFLALHLCAGLCIGTALSAVHGTIGRTSNAHRTFAYATIGFGIFSVIFMGFATQVIAAMQPRNL
FLIFAGVMAIAAAVNWLLFPHSATMPKAEKKPSPNSGRVPRFEPVVWFLIAALLGMNFNQAMNFSFVERIASDHDWPTST
INGILVGVAFLSLIPAPLAVFFEKKLHPVYVGIVGVLLQAALSLGITHALDVPGFAASAIFIPFVMIFSHTFLFGLMSRV
EPTGRAVAANPAITMGGGALGPLVGGILVQTMGYHGLSLATALVATCVVAGLMLVLMRLLPSHASNALAPKRHWPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41582; Mature: 41451

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS00221 MIP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TNLDTKGTRTALIVGHAAGMIDMVSLPIWVGGLVGGYGYSSAQAGGLVTTFLIGVVIAS
CCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
CGLATLFHRFSMRWVPGAGFSGAALAFAALWMASGFGNFLALHLCAGLCIGTALSAVHGT
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
IGRTSNAHRTFAYATIGFGIFSVIFMGFATQVIAAMQPRNLFLIFAGVMAIAAAVNWLLF
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
PHSATMPKAEKKPSPNSGRVPRFEPVVWFLIAALLGMNFNQAMNFSFVERIASDHDWPTS
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHCCCCCCHH
TINGILVGVAFLSLIPAPLAVFFEKKLHPVYVGIVGVLLQAALSLGITHALDVPGFAASA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHH
IFIPFVMIFSHTFLFGLMSRVEPTGRAVAANPAITMGGGALGPLVGGILVQTMGYHGLSL
HHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEECCCHHHHHHHHHHHHHHCCCHHHH
ATALVATCVVAGLMLVLMRLLPSHASNALAPKRHWPL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA