Click here to switch to the map view.

The map label for this gene is fadF [H]

Identifier: 222102921

GI number: 222102921

Start: 604414

End: 605730

Strand: Reverse

Name: fadF [H]

Synonym: Avi_7675

Alternate gene names: 222102921

Gene position: 605730-604414 (Counterclockwise)

Preceding gene: 222102922

Following gene: 222102920

Centisome position: 95.88

GC content: 58.01

Gene sequence:

>1317_bases
ATGACCCATATCAGCCCAACCCTCGAAAAGCTTCACGACAAGCTTGGCTCTTGCACCCGCTGCACCTTTTGCAAATGGGT
GCCGGAAGTCCGCAGTCAGGATTTTGCGGAAATCTGTCCAAGCGTTCAGCACGGCAAATTCTTTTCGCATACGGCAGGCG
GAAAGCTCATTGCGGCCTATGCACTTTTGCATAATCGTGTCGAATACACGCCGGACTTCATTCAGAATGTCTATTCCTGT
TCCATGTGCGGTGGCTGCGATACCAGCTGCAAGACATTGCTTGCCGATTTCGTCGAGCCGCTCGATTCGCTCTATGCGCT
ACGCCAAAAGGTGACGGCCGACGGGCATGCGCCAGAGCCGCTGCGCGAGATGCTCGCGCATCTGCGCACACTCGGGAATG
CAAGGGGCCTGCCCGCCGCAATGCGCGGTGAATGGTTCGCTGGCCTGTCCCTGAAACAGACCAAAACCCATCAGGCACCC
GTTCTCTTCCATGTTGGCGATGTGGCTTTCGATCGCGATGAATGGCCTTTCATCCGCCATATCGCCTCTGAGCTTCAGCG
GCGCGATGTCGATTTCGTCATTGGCGGCGTGGACGAGCCGGATAGCGGTGGTCTTGCCTATGATATCGGTGATCAGGATC
TCGCAGCGGATCTAGCACAGAAAACGGCAGAATGGCTCCGCAAGAGCGGGGCAGGCACGCTTATTGTTTATAGCGATGAT
GCTTTTTCGGCTTTTCGCAATATTTATCCGCGCCTTGGTGTTTCCCTTGGCAACATCAAAGTCATTCATATCGCGCAGTG
GCTGGCCGAAAACCCGCTCACCGTGGCGGCTGGCCAAAAGCGCGACACTGTCACGTACCACGATTCCTGCCGCCTTGGGC
GGCTAGGCGAAGAGCGCCATCCGTGGGAGGGCGAAACGGTGATGGCCTATAATTCCATTCCGATGCGCGTGCCGGAAGGC
GAGCTCTACCTTGGGGTCAATGGTGTCTATGAAGAGCCCCGGCAATTGCTGCGGGCTGTGGATGCCGAGATTGTGGAAAT
GGAGCGCATTCGGGAATTCGCCTTCTGCTGCGGTGCCGGCGGTGGCGGCAAACAGGCCAGCCCCGATTTTGCTCGCGCTG
CTGCCCGCAACCGACTTCAGGAAGCCGAGAGCACCGGGGCAGAGTTCCTCGTAACCAGTTGCACCGCGTGCAGCAGCCAC
ATGAAAGAGGTGGCGCAGGAGGCGGGGTCTTCGATCCGGGTGTATGGGTTGGTCGAATATCTCCACACCCGACAGACCGC
CTCCGCCCCAGACGCATCTCATAAGGCTGGAGAATGA

Upstream 100 bases:

>100_bases
TGGCCTTTGCCCGCAATCCCACCGTCAAGCCATTGCTGCGCGAGACGAAATCCATCTTCGATCCGGACCGTATTCTCAAT
CCAGGGAGGCTTTGCTTCTA

Downstream 100 bases:

>100_bases
CCATGGCTCACGATCGCAACGAAGTTTTGCAAGCGCTTCAATCCATTGTTGGGCAAGACAATGCCACCAATGATCCGAGC
TCAATTGCAAGTTACGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MTHISPTLEKLHDKLGSCTRCTFCKWVPEVRSQDFAEICPSVQHGKFFSHTAGGKLIAAYALLHNRVEYTPDFIQNVYSC
SMCGGCDTSCKTLLADFVEPLDSLYALRQKVTADGHAPEPLREMLAHLRTLGNARGLPAAMRGEWFAGLSLKQTKTHQAP
VLFHVGDVAFDRDEWPFIRHIASELQRRDVDFVIGGVDEPDSGGLAYDIGDQDLAADLAQKTAEWLRKSGAGTLIVYSDD
AFSAFRNIYPRLGVSLGNIKVIHIAQWLAENPLTVAAGQKRDTVTYHDSCRLGRLGEERHPWEGETVMAYNSIPMRVPEG
ELYLGVNGVYEEPRQLLRAVDAEIVEMERIREFAFCCGAGGGGKQASPDFARAAARNRLQEAESTGAEFLVTSCTACSSH
MKEVAQEAGSSIRVYGLVEYLHTRQTASAPDASHKAGE

Sequences:

>Translated_438_residues
MTHISPTLEKLHDKLGSCTRCTFCKWVPEVRSQDFAEICPSVQHGKFFSHTAGGKLIAAYALLHNRVEYTPDFIQNVYSC
SMCGGCDTSCKTLLADFVEPLDSLYALRQKVTADGHAPEPLREMLAHLRTLGNARGLPAAMRGEWFAGLSLKQTKTHQAP
VLFHVGDVAFDRDEWPFIRHIASELQRRDVDFVIGGVDEPDSGGLAYDIGDQDLAADLAQKTAEWLRKSGAGTLIVYSDD
AFSAFRNIYPRLGVSLGNIKVIHIAQWLAENPLTVAAGQKRDTVTYHDSCRLGRLGEERHPWEGETVMAYNSIPMRVPEG
ELYLGVNGVYEEPRQLLRAVDAEIVEMERIREFAFCCGAGGGGKQASPDFARAAARNRLQEAESTGAEFLVTSCTACSSH
MKEVAQEAGSSIRVYGLVEYLHTRQTASAPDASHKAGE
>Mature_437_residues
THISPTLEKLHDKLGSCTRCTFCKWVPEVRSQDFAEICPSVQHGKFFSHTAGGKLIAAYALLHNRVEYTPDFIQNVYSCS
MCGGCDTSCKTLLADFVEPLDSLYALRQKVTADGHAPEPLREMLAHLRTLGNARGLPAAMRGEWFAGLSLKQTKTHQAPV
LFHVGDVAFDRDEWPFIRHIASELQRRDVDFVIGGVDEPDSGGLAYDIGDQDLAADLAQKTAEWLRKSGAGTLIVYSDDA
FSAFRNIYPRLGVSLGNIKVIHIAQWLAENPLTVAAGQKRDTVTYHDSCRLGRLGEERHPWEGETVMAYNSIPMRVPEGE
LYLGVNGVYEEPRQLLRAVDAEIVEMERIREFAFCCGAGGGGKQASPDFARAAARNRLQEAESTGAEFLVTSCTACSSHM
KEVAQEAGSSIRVYGLVEYLHTRQTASAPDASHKAGE

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 48167; Mature: 48036

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHISPTLEKLHDKLGSCTRCTFCKWVPEVRSQDFAEICPSVQHGKFFSHTAGGKLIAAY
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCHHHHHH
ALLHNRVEYTPDFIQNVYSCSMCGGCDTSCKTLLADFVEPLDSLYALRQKVTADGHAPEP
HHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
LREMLAHLRTLGNARGLPAAMRGEWFAGLSLKQTKTHQAPVLFHVGDVAFDRDEWPFIRH
HHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHCCCCCCCEEEEECCEEECCCCCHHHHH
IASELQRRDVDFVIGGVDEPDSGGLAYDIGDQDLAADLAQKTAEWLRKSGAGTLIVYSDD
HHHHHHHCCCCEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCH
AFSAFRNIYPRLGVSLGNIKVIHIAQWLAENPLTVAAGQKRDTVTYHDSCRLGRLGEERH
HHHHHHHHHHHHCCCCCCEEEEEHHHHHHCCCEEEECCCCCCCEEECCCCCCCCCCCCCC
PWEGETVMAYNSIPMRVPEGELYLGVNGVYEEPRQLLRAVDAEIVEMERIREFAFCCGAG
CCCCCEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GGGKQASPDFARAAARNRLQEAESTGAEFLVTSCTACSSHMKEVAQEAGSSIRVYGLVEY
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH
LHTRQTASAPDASHKAGE
HHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
THISPTLEKLHDKLGSCTRCTFCKWVPEVRSQDFAEICPSVQHGKFFSHTAGGKLIAAY
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCHHHHHH
ALLHNRVEYTPDFIQNVYSCSMCGGCDTSCKTLLADFVEPLDSLYALRQKVTADGHAPEP
HHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
LREMLAHLRTLGNARGLPAAMRGEWFAGLSLKQTKTHQAPVLFHVGDVAFDRDEWPFIRH
HHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHCCCCCCCEEEEECCEEECCCCCHHHHH
IASELQRRDVDFVIGGVDEPDSGGLAYDIGDQDLAADLAQKTAEWLRKSGAGTLIVYSDD
HHHHHHHCCCCEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCH
AFSAFRNIYPRLGVSLGNIKVIHIAQWLAENPLTVAAGQKRDTVTYHDSCRLGRLGEERH
HHHHHHHHHHHHCCCCCCEEEEEHHHHHHCCCEEEECCCCCCCEEECCCCCCCCCCCCCC
PWEGETVMAYNSIPMRVPEGELYLGVNGVYEEPRQLLRAVDAEIVEMERIREFAFCCGAG
CCCCCEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GGGKQASPDFARAAARNRLQEAESTGAEFLVTSCTACSSHMKEVAQEAGSSIRVYGLVEY
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH
LHTRQTASAPDASHKAGE
HHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]