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The map label for this gene is pchF [H]

Identifier: 222102920

GI number: 222102920

Start: 602711

End: 604411

Strand: Reverse

Name: pchF [H]

Synonym: Avi_7674

Alternate gene names: 222102920

Gene position: 604411-602711 (Counterclockwise)

Preceding gene: 222102921

Following gene: 222102919

Centisome position: 95.67

GC content: 57.85

Gene sequence:

>1701_bases
ATGGCTCACGATCGCAACGAAGTTTTGCAAGCGCTTCAATCCATTGTTGGGCAAGACAATGCCACCAATGATCCGAGCTC
AATTGCAAGTTACGCCTGGAATGGCGGTGTCGGCTCGATGCCGGGGCCAAAATTTCTTAAAAACTGGCCGATTGCCGTGG
TTATGCCCAACTCGGCAGAGGATGTGGCGGCTATTATCAAATGCTGTCTTGCACGCGGGCTTTCCTTTCGTCCGTTAAGT
TCCGGCAATGGTGGAACCTATCTCAGCGCCAGCGAAAATGTGGTGGTGATGGACCTTTGCCGTATGAACCGTCTGATCAA
GATGGATGCCGCAAACCAGATGGCGGTGATCGAGCCTTTTGTAACTGCGGGCCGATTGCAAGCGGAGGCCATGAAAGTGG
GGCTCAACTGTCATATCGTGGGTGCGGGGCCGTCGCATTCGCCGCTGGCCTCGGCCACGTCCTTTCTGGGGGTTGGCATT
ACCGGTGCCAGCACGGGTGCCAATTTCCGCAATATCCTGGGCATAGAATGGGTGACGCCACAGGGAGACATCGTGCGCAT
GGGCTCTCTTGGTGGTGATGATGACTGGTTCAGCGAGGAGGGGCCGGGGCCGGGCCTGCGCGGCATGATCCGTGGTCTTA
TTGGCGCAAATGGCGGCCTCGGCGTGTTCACCCGTATTGGTTACAAGCTCTATCCGTGGGCGGGGCCTAAGCGTTTGAAC
CTCACCGGGCAAAGCCCGATGCGAGGCATGGCACTGGAGCCAAACATGCGTCTGTTTCTGCCCGTCTGGGATACGATTGA
ACAGATGCGCGACGCCAGCTTTCACCTGAATCGCACAGGCGTTGCCTTTGCACTGCTGCGCATGCCACCAAACCATATCG
GTTGGACGCTGACGGCCACCAATGCCGAATATGCGCGCCGCCGCGAAGCGGGCGACCTGCCGGAATGTGCGCGTCCGGAA
AACAGGTTTGGCTGGCAGATCCTGACCATCGGTCATTCTGCGGGGCAGACGGCCTATCAGGAGAAGACTGTGCAGCACAT
TGTTGCGAGCACCGGCGGGCGGATGATTCCGATTGAACAAAAGGACACGGAAGTGTTGCTGCGCACGCTGGTGACGTCGC
TTTATGTCAGCCGCGTCTTCCGGGGTGCCGGTTCCGGCGGCACCAGCTTTGGGGTTATGGAAACCTTTAACCTGCTGCCG
GACGTGATCAAGGCCAGCGAGGACATTATGGCAAAAGATCGCATGCCCGGCCGCAATTTCGCAGCCGACGGCAAGGAAGG
CTGCTGGGTCTGGCCAACCGAGAGCCGGCAATTGTGGACGGAAAACATCCTTGCATCGCAGGCAGGGACCGTGAAAGGCA
TCGGAGCGGGTTGGAAAGGCTTCCTCAAACACCTTGATATGGTGGATCGCAACCCAAGGCTCGGATTGATGGGCTTCATG
GCGGGTCCATTGATCGAATTGTTTGGACCGCGCTACAGCAACGTCACTTCATGGATGCGGCTGATCAAGCAGCGCGTTGA
TCCGGCGGGACTGGCAGACGCGACAGTGCATGTCAGCGCCAAACAGCTCCCGATTGCCAAGAGATGGCCGACCTTGCAAA
AAATCGCCTTCTCAAAAGCGGGTGCTCCGGTACTGCATTTGGTCTGCCTGTTGCTGGGCGTGATCAGCAAAAAGGAAAAG
CTGCCAGAGCGAAGAGGGTAA

Upstream 100 bases:

>100_bases
AGGCGGGGTCTTCGATCCGGGTGTATGGGTTGGTCGAATATCTCCACACCCGACAGACCGCCTCCGCCCCAGACGCATCT
CATAAGGCTGGAGAATGACC

Downstream 100 bases:

>100_bases
ACATCAACGACAATCTTAGCGTCTGTCATCCGATTGTCGACGTTCCTTGCATGGAGTTTCGAGGTCCATATCGACGACAT
TCAACGCCGTTCAAGGTGCA

Product: oxidoreductase

Products: NA

Alternate protein names: P-cresol methylhydroxylase; PCMH [H]

Number of amino acids: Translated: 566; Mature: 565

Protein sequence:

>566_residues
MAHDRNEVLQALQSIVGQDNATNDPSSIASYAWNGGVGSMPGPKFLKNWPIAVVMPNSAEDVAAIIKCCLARGLSFRPLS
SGNGGTYLSASENVVVMDLCRMNRLIKMDAANQMAVIEPFVTAGRLQAEAMKVGLNCHIVGAGPSHSPLASATSFLGVGI
TGASTGANFRNILGIEWVTPQGDIVRMGSLGGDDDWFSEEGPGPGLRGMIRGLIGANGGLGVFTRIGYKLYPWAGPKRLN
LTGQSPMRGMALEPNMRLFLPVWDTIEQMRDASFHLNRTGVAFALLRMPPNHIGWTLTATNAEYARRREAGDLPECARPE
NRFGWQILTIGHSAGQTAYQEKTVQHIVASTGGRMIPIEQKDTEVLLRTLVTSLYVSRVFRGAGSGGTSFGVMETFNLLP
DVIKASEDIMAKDRMPGRNFAADGKEGCWVWPTESRQLWTENILASQAGTVKGIGAGWKGFLKHLDMVDRNPRLGLMGFM
AGPLIELFGPRYSNVTSWMRLIKQRVDPAGLADATVHVSAKQLPIAKRWPTLQKIAFSKAGAPVLHLVCLLLGVISKKEK
LPERRG

Sequences:

>Translated_566_residues
MAHDRNEVLQALQSIVGQDNATNDPSSIASYAWNGGVGSMPGPKFLKNWPIAVVMPNSAEDVAAIIKCCLARGLSFRPLS
SGNGGTYLSASENVVVMDLCRMNRLIKMDAANQMAVIEPFVTAGRLQAEAMKVGLNCHIVGAGPSHSPLASATSFLGVGI
TGASTGANFRNILGIEWVTPQGDIVRMGSLGGDDDWFSEEGPGPGLRGMIRGLIGANGGLGVFTRIGYKLYPWAGPKRLN
LTGQSPMRGMALEPNMRLFLPVWDTIEQMRDASFHLNRTGVAFALLRMPPNHIGWTLTATNAEYARRREAGDLPECARPE
NRFGWQILTIGHSAGQTAYQEKTVQHIVASTGGRMIPIEQKDTEVLLRTLVTSLYVSRVFRGAGSGGTSFGVMETFNLLP
DVIKASEDIMAKDRMPGRNFAADGKEGCWVWPTESRQLWTENILASQAGTVKGIGAGWKGFLKHLDMVDRNPRLGLMGFM
AGPLIELFGPRYSNVTSWMRLIKQRVDPAGLADATVHVSAKQLPIAKRWPTLQKIAFSKAGAPVLHLVCLLLGVISKKEK
LPERRG
>Mature_565_residues
AHDRNEVLQALQSIVGQDNATNDPSSIASYAWNGGVGSMPGPKFLKNWPIAVVMPNSAEDVAAIIKCCLARGLSFRPLSS
GNGGTYLSASENVVVMDLCRMNRLIKMDAANQMAVIEPFVTAGRLQAEAMKVGLNCHIVGAGPSHSPLASATSFLGVGIT
GASTGANFRNILGIEWVTPQGDIVRMGSLGGDDDWFSEEGPGPGLRGMIRGLIGANGGLGVFTRIGYKLYPWAGPKRLNL
TGQSPMRGMALEPNMRLFLPVWDTIEQMRDASFHLNRTGVAFALLRMPPNHIGWTLTATNAEYARRREAGDLPECARPEN
RFGWQILTIGHSAGQTAYQEKTVQHIVASTGGRMIPIEQKDTEVLLRTLVTSLYVSRVFRGAGSGGTSFGVMETFNLLPD
VIKASEDIMAKDRMPGRNFAADGKEGCWVWPTESRQLWTENILASQAGTVKGIGAGWKGFLKHLDMVDRNPRLGLMGFMA
GPLIELFGPRYSNVTSWMRLIKQRVDPAGLADATVHVSAKQLPIAKRWPTLQKIAFSKAGAPVLHLVCLLLGVISKKEKL
PERRG

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR006094
- InterPro:   IPR016170
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: =1.17.99.1 [H]

Molecular weight: Translated: 61287; Mature: 61155

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHDRNEVLQALQSIVGQDNATNDPSSIASYAWNGGVGSMPGPKFLKNWPIAVVMPNSAE
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHCCCEEEEECCCHH
DVAAIIKCCLARGLSFRPLSSGNGGTYLSASENVVVMDLCRMNRLIKMDAANQMAVIEPF
HHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEHHHHHHEEEECCCCCEEEEHHH
VTAGRLQAEAMKVGLNCHIVGAGPSHSPLASATSFLGVGITGASTGANFRNILGIEWVTP
HHHHHHHHHHHEECCEEEEEECCCCCCCHHHHHHHHEECEECCCCCCCHHHEEEEEEECC
QGDIVRMGSLGGDDDWFSEEGPGPGLRGMIRGLIGANGGLGVFTRIGYKLYPWAGPKRLN
CCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCEEECCCCCCEEE
LTGQSPMRGMALEPNMRLFLPVWDTIEQMRDASFHLNRTGVAFALLRMPPNHIGWTLTAT
ECCCCCCCCEEECCCCEEEEEHHHHHHHHHCCCEEECCCCCEEEEEECCCCCCCEEEEEC
NAEYARRREAGDLPECARPENRFGWQILTIGHSAGQTAYQEKTVQHIVASTGGRMIPIEQ
CHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCC
KDTEVLLRTLVTSLYVSRVFRGAGSGGTSFGVMETFNLLPDVIKASEDIMAKDRMPGRNF
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC
AADGKEGCWVWPTESRQLWTENILASQAGTVKGIGAGWKGFLKHLDMVDRNPRLGLMGFM
CCCCCCCCEEECCCCHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHCCCCCCCHHHHH
AGPLIELFGPRYSNVTSWMRLIKQRVDPAGLADATVHVSAKQLPIAKRWPTLQKIAFSKA
HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEHHHCCCHHHCCHHHHHHHHCC
GAPVLHLVCLLLGVISKKEKLPERRG
CCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AHDRNEVLQALQSIVGQDNATNDPSSIASYAWNGGVGSMPGPKFLKNWPIAVVMPNSAE
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHCCCEEEEECCCHH
DVAAIIKCCLARGLSFRPLSSGNGGTYLSASENVVVMDLCRMNRLIKMDAANQMAVIEPF
HHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEHHHHHHEEEECCCCCEEEEHHH
VTAGRLQAEAMKVGLNCHIVGAGPSHSPLASATSFLGVGITGASTGANFRNILGIEWVTP
HHHHHHHHHHHEECCEEEEEECCCCCCCHHHHHHHHEECEECCCCCCCHHHEEEEEEECC
QGDIVRMGSLGGDDDWFSEEGPGPGLRGMIRGLIGANGGLGVFTRIGYKLYPWAGPKRLN
CCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCEEECCCCCCEEE
LTGQSPMRGMALEPNMRLFLPVWDTIEQMRDASFHLNRTGVAFALLRMPPNHIGWTLTAT
ECCCCCCCCEEECCCCEEEEEHHHHHHHHHCCCEEECCCCCEEEEEECCCCCCCEEEEEC
NAEYARRREAGDLPECARPENRFGWQILTIGHSAGQTAYQEKTVQHIVASTGGRMIPIEQ
CHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCC
KDTEVLLRTLVTSLYVSRVFRGAGSGGTSFGVMETFNLLPDVIKASEDIMAKDRMPGRNF
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC
AADGKEGCWVWPTESRQLWTENILASQAGTVKGIGAGWKGFLKHLDMVDRNPRLGLMGFM
CCCCCCCCEEECCCCHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHCCCCCCCHHHHH
AGPLIELFGPRYSNVTSWMRLIKQRVDPAGLADATVHVSAKQLPIAKRWPTLQKIAFSKA
HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEHHHCCCHHHCCHHHHHHHHCC
GAPVLHLVCLLLGVISKKEKLPERRG
CCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7929007; 10565539; 3790500; 1846290; 10623531 [H]