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The map label for this gene is yihM [C]

Identifier: 222102872

GI number: 222102872

Start: 550112

End: 551242

Strand: Direct

Name: yihM [C]

Synonym: Avi_7610

Alternate gene names: 222102872

Gene position: 550112-551242 (Clockwise)

Preceding gene: 222102871

Following gene: 222102873

Centisome position: 87.07

GC content: 56.85

Gene sequence:

>1131_bases
ATGAGATTAGGAATTGACGGACAAAAACTGCCCGAAGCCAAGAAGCGTGGGCCGCTCAAAAGCCTTGATCACGTCAGGGA
ACTCAGTCTTTCTGGCATCTTCTTCAGCACGGTCCTTGATATGAGTGAAACGCTAGACCCGGGCGAACTGCGCGACATCA
GGGCCAAAGCCGATGAGCTTGGCCTTTATCTCGAAGCCGGTATTGGCAAGATCAACCCCTATTGCAGCGCTGAAGCCCCG
GAATTCAGGGCAATCGGCGATGGCGACGTCATCCTCGGCTTTATCAGGATGATCGAAGCGAGCGCAGCAATTGGCTGTCG
CGAACTTTGGGTGTCGCCGGGAAATTTCAAATCAGAATATCGCGGGCGCCTGGCCAATGACCGCTTCCGGACCGATGTTA
CCTGGGACGAGCAATTGACCGCCATTGAGAAGGTGCTGCAAAAGCTGGCGCCCGTGGCGCGTGCCAATGGTGTTCACCTC
AACATGGAGACCCATGACGAGATCACCTCCTTCGAAATCCTCCGGCTGATCGAAGCGGTCGGTGAGGAGTGCATGGGTGT
CGTCTTCGACACAGCAAACGGCCTGCAACGGGCAGAACACCCGGTCTTCGCTGCAAAACGCGTTGCTCCCTATGTTCGCC
AGACCCACATCAAGGATGCCTATGTCGGCCATGCCACAGGGGGTCTCGATTTCCAGACCCGTCCGGTCGGCCGGGGCATC
GTCGATTTCGCCACGATCATCCCCATCCTTGCCAAGGCCAATTCCGAACTGAACCTTTCCCTTGAAGTCGCCGCCTCCGT
CGAGGACAAACCCCGCAAGGCCAATCCTCGCCAATGCATCGAGATCAACGACCCGATCTGGCGCGCTGGCCATCCGGACC
TGACAGCCGAAGAACTGGAGGCCTATCTGGCACTGGTGGATGCGTTCGAGAAACGTGTGGCCGCCGGAGAGATCCCGGAC
TGGGAAACCTATGAGGCCAACCAGTATGGCTACCCAAGCTATCAGCATCAGTCCTACGGCTTCAATGAGGCGATCACGTT
TATCAAAACCTCAGCGCGCCATATCGAAGAGGTTTGCACACAAAACAGCATTCCGCTTTCAACGCCATCGACAAAGCAGC
ACGCGGCTTGA

Upstream 100 bases:

>100_bases
AGATCAGCCGCGACGCGGCTGACGCACTGGCCGCTCGACCACCAATCAAACGGAAACGCCTTTGCAGCGCATCCGATCAG
GAAACATCACGGAGTAAATC

Downstream 100 bases:

>100_bases
CATCGAATACCAAGGGTCATTGAAAATGGCGCTTGGTATAAGAGGTTGAGCGCCGGTCGCTTCTGGTGCCGGCCCATCCT
AAAATGTTGCGAAGATCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Xylose Isomerase Domain-Containing Protein TIM Barrel; Xylose Isomerase Domain Protein

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MRLGIDGQKLPEAKKRGPLKSLDHVRELSLSGIFFSTVLDMSETLDPGELRDIRAKADELGLYLEAGIGKINPYCSAEAP
EFRAIGDGDVILGFIRMIEASAAIGCRELWVSPGNFKSEYRGRLANDRFRTDVTWDEQLTAIEKVLQKLAPVARANGVHL
NMETHDEITSFEILRLIEAVGEECMGVVFDTANGLQRAEHPVFAAKRVAPYVRQTHIKDAYVGHATGGLDFQTRPVGRGI
VDFATIIPILAKANSELNLSLEVAASVEDKPRKANPRQCIEINDPIWRAGHPDLTAEELEAYLALVDAFEKRVAAGEIPD
WETYEANQYGYPSYQHQSYGFNEAITFIKTSARHIEEVCTQNSIPLSTPSTKQHAA

Sequences:

>Translated_376_residues
MRLGIDGQKLPEAKKRGPLKSLDHVRELSLSGIFFSTVLDMSETLDPGELRDIRAKADELGLYLEAGIGKINPYCSAEAP
EFRAIGDGDVILGFIRMIEASAAIGCRELWVSPGNFKSEYRGRLANDRFRTDVTWDEQLTAIEKVLQKLAPVARANGVHL
NMETHDEITSFEILRLIEAVGEECMGVVFDTANGLQRAEHPVFAAKRVAPYVRQTHIKDAYVGHATGGLDFQTRPVGRGI
VDFATIIPILAKANSELNLSLEVAASVEDKPRKANPRQCIEINDPIWRAGHPDLTAEELEAYLALVDAFEKRVAAGEIPD
WETYEANQYGYPSYQHQSYGFNEAITFIKTSARHIEEVCTQNSIPLSTPSTKQHAA
>Mature_376_residues
MRLGIDGQKLPEAKKRGPLKSLDHVRELSLSGIFFSTVLDMSETLDPGELRDIRAKADELGLYLEAGIGKINPYCSAEAP
EFRAIGDGDVILGFIRMIEASAAIGCRELWVSPGNFKSEYRGRLANDRFRTDVTWDEQLTAIEKVLQKLAPVARANGVHL
NMETHDEITSFEILRLIEAVGEECMGVVFDTANGLQRAEHPVFAAKRVAPYVRQTHIKDAYVGHATGGLDFQTRPVGRGI
VDFATIIPILAKANSELNLSLEVAASVEDKPRKANPRQCIEINDPIWRAGHPDLTAEELEAYLALVDAFEKRVAAGEIPD
WETYEANQYGYPSYQHQSYGFNEAITFIKTSARHIEEVCTQNSIPLSTPSTKQHAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790305, Length=239, Percent_Identity=26.7782426778243, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41650; Mature: 41650

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLGIDGQKLPEAKKRGPLKSLDHVRELSLSGIFFSTVLDMSETLDPGELRDIRAKADEL
CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
GLYLEAGIGKINPYCSAEAPEFRAIGDGDVILGFIRMIEASAAIGCRELWVSPGNFKSEY
CEEEECCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHH
RGRLANDRFRTDVTWDEQLTAIEKVLQKLAPVARANGVHLNMETHDEITSFEILRLIEAV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHH
GEECMGVVFDTANGLQRAEHPVFAAKRVAPYVRQTHIKDAYVGHATGGLDFQTRPVGRGI
HHHHHEEHHHCCCHHHHHCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCHH
VDFATIIPILAKANSELNLSLEVAASVEDKPRKANPRQCIEINDPIWRAGHPDLTAEELE
HHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHH
AYLALVDAFEKRVAAGEIPDWETYEANQYGYPSYQHQSYGFNEAITFIKTSARHIEEVCT
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
QNSIPLSTPSTKQHAA
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRLGIDGQKLPEAKKRGPLKSLDHVRELSLSGIFFSTVLDMSETLDPGELRDIRAKADEL
CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
GLYLEAGIGKINPYCSAEAPEFRAIGDGDVILGFIRMIEASAAIGCRELWVSPGNFKSEY
CEEEECCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHH
RGRLANDRFRTDVTWDEQLTAIEKVLQKLAPVARANGVHLNMETHDEITSFEILRLIEAV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHH
GEECMGVVFDTANGLQRAEHPVFAAKRVAPYVRQTHIKDAYVGHATGGLDFQTRPVGRGI
HHHHHEEHHHCCCHHHHHCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCHH
VDFATIIPILAKANSELNLSLEVAASVEDKPRKANPRQCIEINDPIWRAGHPDLTAEELE
HHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHH
AYLALVDAFEKRVAAGEIPDWETYEANQYGYPSYQHQSYGFNEAITFIKTSARHIEEVCT
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
QNSIPLSTPSTKQHAA
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA