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The map label for this gene is vgrG

Identifier: 222102830

GI number: 222102830

Start: 503466

End: 505427

Strand: Direct

Name: vgrG

Synonym: Avi_7557

Alternate gene names: NA

Gene position: 503466-505427 (Clockwise)

Preceding gene: 222102828

Following gene: 222102831

Centisome position: 79.69

GC content: 54.99

Gene sequence:

>1962_bases
ATGGACGACGTTCTGTCACCGACCGATTTCATTCAGGCAAGCCGTGTGCTGAAACTGTTGTCGCCCTTGGGTGAAGACCA
GCTTTTGCCGGAGCGGATGACGGTGGATGAGGGCGTCAATCGTCTGTTCGAGATCACTGTGTCGGTGCGCGCCAAGCGCG
AGGCAGTGAAGCCGGAAGAACTGATCGGCAAGCTGGTCGATGTGTCCCTGGAAATCCGCCAGGGCGAACTGGATGGGGAT
GGCGTGCGCCGACCGTTCAATGGACTGGTGACAAACCTTTTCGAAGGCCCGCCAGTGACGCGTGGATTGCGGTCCTATAC
CCTGACTATCCGTCCGCAACTGTGGCTGCTGTCGCGCCGGTCCGATTGCCGGATCTGGCAGAATATGACCTCGATGCAGG
TGATGGAAACGCTGTTTTCCGAGCATGGCATTCCAGCTGCCGCATCCGCCCCTCTGCACAAAACACCGCCATCGCGTGAG
TTTTCTGTCCAGTGGAATGAAACGGACCTCGATTACCTGCTGCGCCGCTTCGAGCAGGACGGGTTGTTCTATTGGTTTGA
ACATGAAACCGGCGTTCACCGCCTGAAGGTCAGCGACAGCAAGGTGGCCTGGAGCAAGCCATCGGCTGCGGCAGAAGGTG
TCGACAAAGTCAGATTAGCCCAGGGCTCGTCGGACCGCAACCATATCAACGAATGGATGCGGCAATTCTCCTATGTCCCC
GGCCAGCGCGCCGGTGCGGACTGGAATTTTGAGACGCCGAGCACTGTGCCACTGAACGTCACGCCATCGCTGATCCAGAT
GCCGGGGGCCAAGCAGCGCGAGCTTTACGAATATCCGGCCCGCATCTCCGATATCAAAGAGGCCGAAGTGGCCGAGACGT
TTCGAACGCAAGCAACGGAAGCCGATCATGAGCGGGTGACGGGCCAGTCCAATGTGCGCTTTCTGGAAGCCGGTCGCCGG
TTCACGCCCTATGAGGAACCGCATCCGGAACACAAATACGAAGAGCATGTGATTACCCGAATTGTGCATCGGGTGGTGGA
CCGATCCTATGAGACGGCCAGCAATGAGATGGAATATGCCAACGCATTCGAGGCCATTCCCTCACGCGTTCCACTAACGC
CGCACCGAGAGACCAAACGTCCGCGTATCGAGGGGACACAGGTGGCGATTGTCGCCGGACCGTCGGGCGAAGAAATCCAC
ACCGACAAATACGGACGCATCAAGCTCTGGTATCCCTGGGATCGCAAGGCAAAAAAGGATGGCAGTGATACTTGCTGGGT
GCGGGTTGCCCAGAACTGGGCGGGCGGCCAGTGGGGAGGACAGATCATCCCGCGCATCGGAATGGAGGTGATGGTTGCCT
TTATCGACGGCGATCCTGATCGACCGCTGGTGACTGGCGTCGTGCCAAACCCCAAAAACGCTGTGCCTTATGATCTGCCA
ACGAATAAGACGAAGAGCGTGTTTCGGACGAACACGCATAAGGGCAAAGGCTACAATGAACTGACCTTTGAGGACGAGAA
AGACCGCGAGGAGGTCTATGTCCATGCGCAAAAGGACCAGAATATCAAGGTCGAGAACAATTATTCGAAGCGCATCAACA
CTAATAAGGTGGAGAGTGTAGGCCACAACAAAGCAACTGAAGTAACAAACAATCATTATGAAGTTGTTGGCGGCGATATG
GATATTAGAGTTGGGCCTTCAAACAAATGGAGCATTACGCCGCAGCAGGCCGATACAATGGCCGCAGGCATCGGCCAAGC
CACATACGCGTTTGGAGAAAAGGGCCAATCGCCGATCGGTGAGGGCAATCTCCATATTGTCGTTCAAAAAAACAAAAGTC
AAAAAATTGGCGATACGCACACCGAAGATGTTGGTCGTCTGAAAATAATAGATGTGGGTGATGAATACAGTTTAAGGGCA
GTTAATAACGTAGTGATTGAAGCAGGAAAAAACTTGTCTTGA

Upstream 100 bases:

>100_bases
TGGCCTATTTTCGCCATGGGAATGGCGCGATTGGGATACTTTTCGCACCTTTCCAATATTGCATTCGTTTTTGATGACGC
GATAAGTGGAGAGGCATTCC

Downstream 100 bases:

>100_bases
ATTGCGGGAAGAGTCGGATTGTTCTTAATTCTGATGGAACAATTACGATCAGCGGAAAACGGATAATAGGCTCTGCTGAC
GATGTATTTGATATACTTGG

Product: vgrG protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; Vgr-Related Protein; RHS Accessory Genetic Element; Two Component LuxR Family Transcriptional Regulator; Conserved Hypothethical Protein; Rhs Element Vgr Family; Rhs Element Vgr ProteinGp5-Like; VgrG-Like Protein; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Rhs Protein; Rhs/Vgr-Family Protein; Fimbrial Operon Related Protein; Vgr Protein; VgrG Family T6SS G; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 653; Mature: 653

Protein sequence:

>653_residues
MDDVLSPTDFIQASRVLKLLSPLGEDQLLPERMTVDEGVNRLFEITVSVRAKREAVKPEELIGKLVDVSLEIRQGELDGD
GVRRPFNGLVTNLFEGPPVTRGLRSYTLTIRPQLWLLSRRSDCRIWQNMTSMQVMETLFSEHGIPAAASAPLHKTPPSRE
FSVQWNETDLDYLLRRFEQDGLFYWFEHETGVHRLKVSDSKVAWSKPSAAAEGVDKVRLAQGSSDRNHINEWMRQFSYVP
GQRAGADWNFETPSTVPLNVTPSLIQMPGAKQRELYEYPARISDIKEAEVAETFRTQATEADHERVTGQSNVRFLEAGRR
FTPYEEPHPEHKYEEHVITRIVHRVVDRSYETASNEMEYANAFEAIPSRVPLTPHRETKRPRIEGTQVAIVAGPSGEEIH
TDKYGRIKLWYPWDRKAKKDGSDTCWVRVAQNWAGGQWGGQIIPRIGMEVMVAFIDGDPDRPLVTGVVPNPKNAVPYDLP
TNKTKSVFRTNTHKGKGYNELTFEDEKDREEVYVHAQKDQNIKVENNYSKRINTNKVESVGHNKATEVTNNHYEVVGGDM
DIRVGPSNKWSITPQQADTMAAGIGQATYAFGEKGQSPIGEGNLHIVVQKNKSQKIGDTHTEDVGRLKIIDVGDEYSLRA
VNNVVIEAGKNLS

Sequences:

>Translated_653_residues
MDDVLSPTDFIQASRVLKLLSPLGEDQLLPERMTVDEGVNRLFEITVSVRAKREAVKPEELIGKLVDVSLEIRQGELDGD
GVRRPFNGLVTNLFEGPPVTRGLRSYTLTIRPQLWLLSRRSDCRIWQNMTSMQVMETLFSEHGIPAAASAPLHKTPPSRE
FSVQWNETDLDYLLRRFEQDGLFYWFEHETGVHRLKVSDSKVAWSKPSAAAEGVDKVRLAQGSSDRNHINEWMRQFSYVP
GQRAGADWNFETPSTVPLNVTPSLIQMPGAKQRELYEYPARISDIKEAEVAETFRTQATEADHERVTGQSNVRFLEAGRR
FTPYEEPHPEHKYEEHVITRIVHRVVDRSYETASNEMEYANAFEAIPSRVPLTPHRETKRPRIEGTQVAIVAGPSGEEIH
TDKYGRIKLWYPWDRKAKKDGSDTCWVRVAQNWAGGQWGGQIIPRIGMEVMVAFIDGDPDRPLVTGVVPNPKNAVPYDLP
TNKTKSVFRTNTHKGKGYNELTFEDEKDREEVYVHAQKDQNIKVENNYSKRINTNKVESVGHNKATEVTNNHYEVVGGDM
DIRVGPSNKWSITPQQADTMAAGIGQATYAFGEKGQSPIGEGNLHIVVQKNKSQKIGDTHTEDVGRLKIIDVGDEYSLRA
VNNVVIEAGKNLS
>Mature_653_residues
MDDVLSPTDFIQASRVLKLLSPLGEDQLLPERMTVDEGVNRLFEITVSVRAKREAVKPEELIGKLVDVSLEIRQGELDGD
GVRRPFNGLVTNLFEGPPVTRGLRSYTLTIRPQLWLLSRRSDCRIWQNMTSMQVMETLFSEHGIPAAASAPLHKTPPSRE
FSVQWNETDLDYLLRRFEQDGLFYWFEHETGVHRLKVSDSKVAWSKPSAAAEGVDKVRLAQGSSDRNHINEWMRQFSYVP
GQRAGADWNFETPSTVPLNVTPSLIQMPGAKQRELYEYPARISDIKEAEVAETFRTQATEADHERVTGQSNVRFLEAGRR
FTPYEEPHPEHKYEEHVITRIVHRVVDRSYETASNEMEYANAFEAIPSRVPLTPHRETKRPRIEGTQVAIVAGPSGEEIH
TDKYGRIKLWYPWDRKAKKDGSDTCWVRVAQNWAGGQWGGQIIPRIGMEVMVAFIDGDPDRPLVTGVVPNPKNAVPYDLP
TNKTKSVFRTNTHKGKGYNELTFEDEKDREEVYVHAQKDQNIKVENNYSKRINTNKVESVGHNKATEVTNNHYEVVGGDM
DIRVGPSNKWSITPQQADTMAAGIGQATYAFGEKGQSPIGEGNLHIVVQKNKSQKIGDTHTEDVGRLKIIDVGDEYSLRA
VNNVVIEAGKNLS

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73792; Mature: 73792

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDVLSPTDFIQASRVLKLLSPLGEDQLLPERMTVDEGVNRLFEITVSVRAKREAVKPEE
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEEEEEEHHHHHHCCCHHH
LIGKLVDVSLEIRQGELDGDGVRRPFNGLVTNLFEGPPVTRGLRSYTLTIRPQLWLLSRR
HHHHHHCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCHHCCCEEEEEEECCEEEEECCC
SDCRIWQNMTSMQVMETLFSEHGIPAAASAPLHKTPPSREFSVQWNETDLDYLLRRFEQD
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCC
GLFYWFEHETGVHRLKVSDSKVAWSKPSAAAEGVDKVRLAQGSSDRNHINEWMRQFSYVP
CCEEEEECCCCEEEEEECCCEEECCCCCHHHCCCHHEEEECCCCCHHHHHHHHHHHCCCC
GQRAGADWNFETPSTVPLNVTPSLIQMPGAKQRELYEYPARISDIKEAEVAETFRTQATE
CCCCCCCCCCCCCCEEEECCCHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
ADHERVTGQSNVRFLEAGRRFTPYEEPHPEHKYEEHVITRIVHRVVDRSYETASNEMEYA
CHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCHHHHH
NAFEAIPSRVPLTPHRETKRPRIEGTQVAIVAGPSGEEIHTDKYGRIKLWYPWDRKAKKD
HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEECCCCCCEEEEECCCCCCCCC
GSDTCWVRVAQNWAGGQWGGQIIPRIGMEVMVAFIDGDPDRPLVTGVVPNPKNAVPYDLP
CCCEEEEEEECCCCCCCCCCCHHHHCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCC
TNKTKSVFRTNTHKGKGYNELTFEDEKDREEVYVHAQKDQNIKVENNYSKRINTNKVESV
CCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCHHHCCCCCHHHHC
GHNKATEVTNNHYEVVGGDMDIRVGPSNKWSITPQQADTMAAGIGQATYAFGEKGQSPIG
CCCCHHHCCCCCEEEECCCEEEEECCCCCEEECHHHHHHHHHHCCHHHHHHCCCCCCCCC
EGNLHIVVQKNKSQKIGDTHTEDVGRLKIIDVGDEYSLRAVNNVVIEAGKNLS
CCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHEECCCCCC
>Mature Secondary Structure
MDDVLSPTDFIQASRVLKLLSPLGEDQLLPERMTVDEGVNRLFEITVSVRAKREAVKPEE
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEEEEEEHHHHHHCCCHHH
LIGKLVDVSLEIRQGELDGDGVRRPFNGLVTNLFEGPPVTRGLRSYTLTIRPQLWLLSRR
HHHHHHCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCHHCCCEEEEEEECCEEEEECCC
SDCRIWQNMTSMQVMETLFSEHGIPAAASAPLHKTPPSREFSVQWNETDLDYLLRRFEQD
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCC
GLFYWFEHETGVHRLKVSDSKVAWSKPSAAAEGVDKVRLAQGSSDRNHINEWMRQFSYVP
CCEEEEECCCCEEEEEECCCEEECCCCCHHHCCCHHEEEECCCCCHHHHHHHHHHHCCCC
GQRAGADWNFETPSTVPLNVTPSLIQMPGAKQRELYEYPARISDIKEAEVAETFRTQATE
CCCCCCCCCCCCCCEEEECCCHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
ADHERVTGQSNVRFLEAGRRFTPYEEPHPEHKYEEHVITRIVHRVVDRSYETASNEMEYA
CHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCHHHHH
NAFEAIPSRVPLTPHRETKRPRIEGTQVAIVAGPSGEEIHTDKYGRIKLWYPWDRKAKKD
HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEECCCCCCEEEEECCCCCCCCC
GSDTCWVRVAQNWAGGQWGGQIIPRIGMEVMVAFIDGDPDRPLVTGVVPNPKNAVPYDLP
CCCEEEEEEECCCCCCCCCCCHHHHCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCC
TNKTKSVFRTNTHKGKGYNELTFEDEKDREEVYVHAQKDQNIKVENNYSKRINTNKVESV
CCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCHHHCCCCCHHHHC
GHNKATEVTNNHYEVVGGDMDIRVGPSNKWSITPQQADTMAAGIGQATYAFGEKGQSPIG
CCCCHHHCCCCCEEEECCCEEEEECCCCCEEECHHHHHHHHHHCCHHHHHHCCCCCCCCC
EGNLHIVVQKNKSQKIGDTHTEDVGRLKIIDVGDEYSLRAVNNVVIEAGKNLS
CCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA