| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is purA [H]
Identifier: 222102825
GI number: 222102825
Start: 497289
End: 498467
Strand: Reverse
Name: purA [H]
Synonym: Avi_7550
Alternate gene names: 222102825
Gene position: 498467-497289 (Counterclockwise)
Preceding gene: 222102826
Following gene: 222102824
Centisome position: 78.9
GC content: 57.0
Gene sequence:
>1179_bases ATGAGCACCGCTTATGCAGTTCTCGGCGCTGGTTGGGGCGATGAGGGCAAGGGCTTGATGACTGATGCCCTGGCCAGCGC TGGAAGCGTTGTCGTGCGGGCCAATGGTGGCGCCCAAGCTGGTCATACGGTCCAGCGTCCGGATGGCACACGCCATGTGT TCCATCATGTAGGCAGCGGTGCCCTTCGGGGTGCCACTACCTACATGTCGCGCTTCTTTATTCATAACCCCCTGCTGCTG CTGCGGGAGTTGTCTGAACTCGACAAGATTGGCGTTCGCCCAAGCTTGTTTGCCGACCCAAACGGGCTGGTGACCACTCC GTGGGATATGATGATCAACCAGATCGCAGAGGAGGCTCGCAATAGCGGGCGACATGGCTCCTGCGGCCTTGGAATCAATG AGACCATCCGACGGAGCGAAAGAGATGGATTCAAGCTTCAGTTCAGCGATCTGGCAAACCTCACAAAGATGGATGAAATC GTCAGACGGATCCAGAAGGAGTGGGTGCCTTCTCGATTAACGGAGCTAGGATTTTTGCCATCTGAGGCCTGGCAAGCGCG GCTTGTTTCTCCGGTTATCGCGGAGCGATTTACACAGGACGTTGAAGATTTCAGTCGTGTCGTCTGGCCCAATGATGGTA CGGTCGCAGCAGTGGCGTCTGCAAGCGACAGGCTCATTTTCGAGGGCGCCCAAGGCTTGTTACTCGATCAGGATCATGCC TTCTTTCCGCATGTCACTCCCTCCAAGACCGGAATTGCCAATCCATCTATCCTTGCGGCGGAATGGGGGGTTGGTGAAAT CAAGGCAATCTACATGACACGCGCTTACGCCACACGGCATGGCGCTGGTCCATTTCCACGGGCTACGCCCGAGATGGTCT ACCCAGATGCAACGAATATCCCTAACCTTTGGCAGGGCACGTTGAGGTTCGGAGCGCTCGATCTCGATCTGCTGGCCAAA ACCATTCTTGAGGACGAAGCTCGGTCTTCAGTGCGGGTCGAGACGTCTTTCGCAATGACGTGCCTCGATCAGATCGCCGA TCAGGCGGTCTGGTGGCGGAGCAATATTCGGGAAACCGGCGCTGGCAAAGATCTGCTGGAGGCAGCACGTCGTCATTTGC AATGTCCGCTCGCAGGTAAAAGCTTCGGCCCCTGCCGTGAGGACGTCACGTTCGGCTAG
Upstream 100 bases:
>100_bases CGAGTTGGAGCGGCGATACAGCTTTGGTCGTCCAGAAGGCGACGAAAGGTCTTTCGCCTGCGACCAAAAGCGGAGGCCTG CGTTGGTTCGGCGGTAAGAA
Downstream 100 bases:
>100_bases GTTCCGATCTGACCGTGATCCACTGTATCTCCGACATCGCTCTCCCGCTGGAGTCACTGAAATCTGTTTTCCTTGTTATG CCGGTTCTGGCATTTCTCTG
Product: adenylosuccinate synthetase
Products: NA
Alternate protein names: AMPSase; AdSS; IMP--aspartate ligase [H]
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MSTAYAVLGAGWGDEGKGLMTDALASAGSVVVRANGGAQAGHTVQRPDGTRHVFHHVGSGALRGATTYMSRFFIHNPLLL LRELSELDKIGVRPSLFADPNGLVTTPWDMMINQIAEEARNSGRHGSCGLGINETIRRSERDGFKLQFSDLANLTKMDEI VRRIQKEWVPSRLTELGFLPSEAWQARLVSPVIAERFTQDVEDFSRVVWPNDGTVAAVASASDRLIFEGAQGLLLDQDHA FFPHVTPSKTGIANPSILAAEWGVGEIKAIYMTRAYATRHGAGPFPRATPEMVYPDATNIPNLWQGTLRFGALDLDLLAK TILEDEARSSVRVETSFAMTCLDQIADQAVWWRSNIRETGAGKDLLEAARRHLQCPLAGKSFGPCREDVTFG
Sequences:
>Translated_392_residues MSTAYAVLGAGWGDEGKGLMTDALASAGSVVVRANGGAQAGHTVQRPDGTRHVFHHVGSGALRGATTYMSRFFIHNPLLL LRELSELDKIGVRPSLFADPNGLVTTPWDMMINQIAEEARNSGRHGSCGLGINETIRRSERDGFKLQFSDLANLTKMDEI VRRIQKEWVPSRLTELGFLPSEAWQARLVSPVIAERFTQDVEDFSRVVWPNDGTVAAVASASDRLIFEGAQGLLLDQDHA FFPHVTPSKTGIANPSILAAEWGVGEIKAIYMTRAYATRHGAGPFPRATPEMVYPDATNIPNLWQGTLRFGALDLDLLAK TILEDEARSSVRVETSFAMTCLDQIADQAVWWRSNIRETGAGKDLLEAARRHLQCPLAGKSFGPCREDVTFG >Mature_391_residues STAYAVLGAGWGDEGKGLMTDALASAGSVVVRANGGAQAGHTVQRPDGTRHVFHHVGSGALRGATTYMSRFFIHNPLLLL RELSELDKIGVRPSLFADPNGLVTTPWDMMINQIAEEARNSGRHGSCGLGINETIRRSERDGFKLQFSDLANLTKMDEIV RRIQKEWVPSRLTELGFLPSEAWQARLVSPVIAERFTQDVEDFSRVVWPNDGTVAAVASASDRLIFEGAQGLLLDQDHAF FPHVTPSKTGIANPSILAAEWGVGEIKAIYMTRAYATRHGAGPFPRATPEMVYPDATNIPNLWQGTLRFGALDLDLLAKT ILEDEARSSVRVETSFAMTCLDQIADQAVWWRSNIRETGAGKDLLEAARRHLQCPLAGKSFGPCREDVTFG
Specific function: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP [H]
COG id: COG0104
COG function: function code F; Adenylosuccinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylosuccinate synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1790620, Length=296, Percent_Identity=32.0945945945946, Blast_Score=108, Evalue=5e-25, Organism=Saccharomyces cerevisiae, GI6324109, Length=299, Percent_Identity=28.4280936454849, Blast_Score=88, Evalue=2e-18,
Paralogues:
None
Copy number: 940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018220 - InterPro: IPR001114 [H]
Pfam domain/function: PF00709 Adenylsucc_synt [H]
EC number: =6.3.4.4 [H]
Molecular weight: Translated: 42871; Mature: 42740
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS01266 ADENYLOSUCCIN_SYN_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAYAVLGAGWGDEGKGLMTDALASAGSVVVRANGGAQAGHTVQRPDGTRHVFHHVGSG CCCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCC ALRGATTYMSRFFIHNPLLLLRELSELDKIGVRPSLFADPNGLVTTPWDMMINQIAEEAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEECCHHHHHHHHHHHHH NSGRHGSCGLGINETIRRSERDGFKLQFSDLANLTKMDEIVRRIQKEWVPSRLTELGFLP HCCCCCCCCCCHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SEAWQARLVSPVIAERFTQDVEDFSRVVWPNDGTVAAVASASDRLIFEGAQGLLLDQDHA CHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCCCEEEECCCCCEECCCCC FFPHVTPSKTGIANPSILAAEWGVGEIKAIYMTRAYATRHGAGPFPRATPEMVYPDATNI CCCCCCCCCCCCCCCCEEEECCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC PNLWQGTLRFGALDLDLLAKTILEDEARSSVRVETSFAMTCLDQIADQAVWWRSNIRETG CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHCHHCC AGKDLLEAARRHLQCPLAGKSFGPCREDVTFG CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure STAYAVLGAGWGDEGKGLMTDALASAGSVVVRANGGAQAGHTVQRPDGTRHVFHHVGSG CCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCC ALRGATTYMSRFFIHNPLLLLRELSELDKIGVRPSLFADPNGLVTTPWDMMINQIAEEAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEECCHHHHHHHHHHHHH NSGRHGSCGLGINETIRRSERDGFKLQFSDLANLTKMDEIVRRIQKEWVPSRLTELGFLP HCCCCCCCCCCHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SEAWQARLVSPVIAERFTQDVEDFSRVVWPNDGTVAAVASASDRLIFEGAQGLLLDQDHA CHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCCCEEEECCCCCEECCCCC FFPHVTPSKTGIANPSILAAEWGVGEIKAIYMTRAYATRHGAGPFPRATPEMVYPDATNI CCCCCCCCCCCCCCCCEEEECCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC PNLWQGTLRFGALDLDLLAKTILEDEARSSVRVETSFAMTCLDQIADQAVWWRSNIRETG CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHCHHCC AGKDLLEAARRHLQCPLAGKSFGPCREDVTFG CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA