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The map label for this gene is dppB [C]

Identifier: 222102801

GI number: 222102801

Start: 464930

End: 465883

Strand: Direct

Name: dppB [C]

Synonym: Avi_7517

Alternate gene names: 222102801

Gene position: 464930-465883 (Clockwise)

Preceding gene: 222102800

Following gene: 222102802

Centisome position: 73.59

GC content: 54.4

Gene sequence:

>954_bases
GTGATCACTTATCTGTTGAAACGGCTGGCTATTGCTGGCTTCCTGATGCTGCTGGTATCCGCGCTGGTGTTTTTACTGAT
GCGCGGATTACCGGGCGATCCTGCGCTGATCGCACTCGGCGATTCCGCATCCGCTGATGCCATTGAGGCTTATCGCAACC
GCATGGGGCTCAACGATCCCTTGATTGTGCAGTATGTTCATTGGATCACGGGCATCTTGCTGCGGTGGGATTTCGGCAAG
TCGGTGCTGAACGAGCAGAATGTCTCGCTCATGATCAGCCAAAGGCTGCCCAATACACTGACGATTGGCATTCCCTCGAT
CATTTTGGGGATCATTCTGGGCCTGCCGATCGGCATTTTGAGCGCAATCACCAGAGGTACGTGGATCGATCAGAGCTTCA
CTCTGATTGTGAACGCTTTTCTGGGAACGCCGCGGTTTCTGGTGGCGATTTTTGGCGTCTTCATTCTCGCCTTCAAGCTG
AGGCTCATTCCTCTTCAGGGCTACACGCCGCCGTGGGTGGATTTGGCGGCCTATGCGCACAAAGCGATATGGCCTGTCTT
TATCAACAGCATCTATATCTTCGCGGTTCTGGCCCGCTACACACGCTCCAACCTGCTTGAAGTGATGACGCAGGATTATA
TCCGAACGGCGCGCGCCAACGGCCTGTCCGAGACGCGGGTTATTTTCCGCCACGCCCTGAAAAACGGTCTGATCCCGGTT
GTGACGATCATCGGGTTGCAGATGCCGCAAATTATCGCAGGCGCAGTGATTATCGAGTCCATCTTCAACATCCCCGGCGT
TGGGCAACTGGTGCTCAATGGCGTTTTAAACCGGGATTATCTGGTTGTGCAGGCGGCGGTGCTGGTGATTTCCATGGCGA
CAATTGCATCCAACCTGATGGTGGACCTGACCTATGCCCTGATCGATCCGCGCATAAAAAGAATGGCATGGTGA

Upstream 100 bases:

>100_bases
AATATTCGACGATTTACGTTCTCAGCAAACGCGTCAAGGCATCAGGTATCGGCGCGACCTTCTTCTCCGTTGCCTCTCTC
TCCACCGCGTATCTCGACAC

Downstream 100 bases:

>100_bases
TGCCGATATGACGAAAACAAGCGCAACCGTAAATGAGCCTATCCAACGCAGCGCTGGCAGAATGCTGGCGGGCCGTCTTT
TCGCACGTGGTTTAATCGTT

Product: ABC transporter membrane spanning protein (dipeptide)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MITYLLKRLAIAGFLMLLVSALVFLLMRGLPGDPALIALGDSASADAIEAYRNRMGLNDPLIVQYVHWITGILLRWDFGK
SVLNEQNVSLMISQRLPNTLTIGIPSIILGIILGLPIGILSAITRGTWIDQSFTLIVNAFLGTPRFLVAIFGVFILAFKL
RLIPLQGYTPPWVDLAAYAHKAIWPVFINSIYIFAVLARYTRSNLLEVMTQDYIRTARANGLSETRVIFRHALKNGLIPV
VTIIGLQMPQIIAGAVIIESIFNIPGVGQLVLNGVLNRDYLVVQAAVLVISMATIASNLMVDLTYALIDPRIKRMAW

Sequences:

>Translated_317_residues
MITYLLKRLAIAGFLMLLVSALVFLLMRGLPGDPALIALGDSASADAIEAYRNRMGLNDPLIVQYVHWITGILLRWDFGK
SVLNEQNVSLMISQRLPNTLTIGIPSIILGIILGLPIGILSAITRGTWIDQSFTLIVNAFLGTPRFLVAIFGVFILAFKL
RLIPLQGYTPPWVDLAAYAHKAIWPVFINSIYIFAVLARYTRSNLLEVMTQDYIRTARANGLSETRVIFRHALKNGLIPV
VTIIGLQMPQIIAGAVIIESIFNIPGVGQLVLNGVLNRDYLVVQAAVLVISMATIASNLMVDLTYALIDPRIKRMAW
>Mature_317_residues
MITYLLKRLAIAGFLMLLVSALVFLLMRGLPGDPALIALGDSASADAIEAYRNRMGLNDPLIVQYVHWITGILLRWDFGK
SVLNEQNVSLMISQRLPNTLTIGIPSIILGIILGLPIGILSAITRGTWIDQSFTLIVNAFLGTPRFLVAIFGVFILAFKL
RLIPLQGYTPPWVDLAAYAHKAIWPVFINSIYIFAVLARYTRSNLLEVMTQDYIRTARANGLSETRVIFRHALKNGLIPV
VTIIGLQMPQIIAGAVIIESIFNIPGVGQLVLNGVLNRDYLVVQAAVLVISMATIASNLMVDLTYALIDPRIKRMAW

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=313, Percent_Identity=36.741214057508, Blast_Score=204, Evalue=4e-54,
Organism=Escherichia coli, GI1789965, Length=339, Percent_Identity=32.7433628318584, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1787497, Length=314, Percent_Identity=32.1656050955414, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1789888, Length=319, Percent_Identity=32.9153605015674, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1787761, Length=318, Percent_Identity=32.0754716981132, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1787550, Length=277, Percent_Identity=28.5198555956679, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1788504, Length=284, Percent_Identity=26.4084507042254, Blast_Score=109, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34980; Mature: 34980

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITYLLKRLAIAGFLMLLVSALVFLLMRGLPGDPALIALGDSASADAIEAYRNRMGLNDP
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCH
LIVQYVHWITGILLRWDFGKSVLNEQNVSLMISQRLPNTLTIGIPSIILGIILGLPIGIL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEECHHHHHHHHHHHHHHHHH
SAITRGTWIDQSFTLIVNAFLGTPRFLVAIFGVFILAFKLRLIPLQGYTPPWVDLAAYAH
HHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHH
KAIWPVFINSIYIFAVLARYTRSNLLEVMTQDYIRTARANGLSETRVIFRHALKNGLIPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHH
VTIIGLQMPQIIAGAVIIESIFNIPGVGQLVLNGVLNRDYLVVQAAVLVISMATIASNLM
HHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VDLTYALIDPRIKRMAW
HHHHHHHHCHHHHHHCC
>Mature Secondary Structure
MITYLLKRLAIAGFLMLLVSALVFLLMRGLPGDPALIALGDSASADAIEAYRNRMGLNDP
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCH
LIVQYVHWITGILLRWDFGKSVLNEQNVSLMISQRLPNTLTIGIPSIILGIILGLPIGIL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEECHHHHHHHHHHHHHHHHH
SAITRGTWIDQSFTLIVNAFLGTPRFLVAIFGVFILAFKLRLIPLQGYTPPWVDLAAYAH
HHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHH
KAIWPVFINSIYIFAVLARYTRSNLLEVMTQDYIRTARANGLSETRVIFRHALKNGLIPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHH
VTIIGLQMPQIIAGAVIIESIFNIPGVGQLVLNGVLNRDYLVVQAAVLVISMATIASNLM
HHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VDLTYALIDPRIKRMAW
HHHHHHHHCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424; 8796346 [H]