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The map label for this gene is ycgF [H]

Identifier: 222102766

GI number: 222102766

Start: 424178

End: 424789

Strand: Reverse

Name: ycgF [H]

Synonym: Avi_7458

Alternate gene names: 222102766

Gene position: 424789-424178 (Counterclockwise)

Preceding gene: 222102767

Following gene: 222102764

Centisome position: 67.24

GC content: 57.52

Gene sequence:

>612_bases
ATGGAGCTGACACTCATTTTGAAAAGCATTGTGCTTGGCCTTGCTGTCGCAGCCCCGCTCGGCCCCATCGGCGCCTTGTG
CATCAACCGGACTCTTGAACGTGGGTTCTGGGCCGGGGTGGCGGGCGGCTTTGGGACTGCTCTGGCGGATGCCGTCTACG
CCAGTCTCGCTGCGCTTGGCTTTTCCGCTTTCGCGGCGACCCTTGCGACAATCGATACGCCGCTCAAAATCATCGGTGGA
CTTTTCATGGTGTGGCTCGGCTGGAAAAGCCTGAAGCCCAAACCTCTCGCGGACGCGGCCAAGGTCGGAGCGCGCGATCT
TTTCGGTACCATCGCTGCAACCTTTTTCCTGACGATTACCAACCCTGTGACCATTCTGTCCTTTGCTGCAATTTTTGCCG
GTCTTGGCCTTGCTGACGCATCGGGGACGACAAATGCGTTTTTCGTGGTCGCAGGCGTTTTCCTTGGCTCGTTGCTGTGG
TGGTTCCTACTGAGTGGCGGCATTGCATTGGCGCGACAGCGTCTTCCCCCAAGTTTTGCCCGCTGGGTTTCCTGTTTGTC
TGGACTGATACTGATCTCGTTCGGACTTTTTGCCCTCGGTTCAATCGCTTGA

Upstream 100 bases:

>100_bases
CGGGAATGAAACAGAACAGATTCCTTGCACGTAGCGAGACAATCATTGCTCTCTCATCCGTGGTGCCAGGACCATTCATG
CCGAAGGGAAGTTAGGACTG

Downstream 100 bases:

>100_bases
GGCATGATTGCTCGATTAAGATATCCGGCGTTAGCGATTGGTGTCCGTCAATACATTCACCGGAGTTGACGGTAAAGATA
AGACGACTGAACTTTAATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MELTLILKSIVLGLAVAAPLGPIGALCINRTLERGFWAGVAGGFGTALADAVYASLAALGFSAFAATLATIDTPLKIIGG
LFMVWLGWKSLKPKPLADAAKVGARDLFGTIAATFFLTITNPVTILSFAAIFAGLGLADASGTTNAFFVVAGVFLGSLLW
WFLLSGGIALARQRLPPSFARWVSCLSGLILISFGLFALGSIA

Sequences:

>Translated_203_residues
MELTLILKSIVLGLAVAAPLGPIGALCINRTLERGFWAGVAGGFGTALADAVYASLAALGFSAFAATLATIDTPLKIIGG
LFMVWLGWKSLKPKPLADAAKVGARDLFGTIAATFFLTITNPVTILSFAAIFAGLGLADASGTTNAFFVVAGVFLGSLLW
WFLLSGGIALARQRLPPSFARWVSCLSGLILISFGLFALGSIA
>Mature_203_residues
MELTLILKSIVLGLAVAAPLGPIGALCINRTLERGFWAGVAGGFGTALADAVYASLAALGFSAFAATLATIDTPLKIIGG
LFMVWLGWKSLKPKPLADAAKVGARDLFGTIAATFFLTITNPVTILSFAAIFAGLGLADASGTTNAFFVVAGVFLGSLLW
WFLLSGGIALARQRLPPSFARWVSCLSGLILISFGLFALGSIA

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 20924; Mature: 20924

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELTLILKSIVLGLAVAAPLGPIGALCINRTLERGFWAGVAGGFGTALADAVYASLAALG
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
FSAFAATLATIDTPLKIIGGLFMVWLGWKSLKPKPLADAAKVGARDLFGTIAATFFLTIT
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
NPVTILSFAAIFAGLGLADASGTTNAFFVVAGVFLGSLLWWFLLSGGIALARQRLPPSFA
CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHH
RWVSCLSGLILISFGLFALGSIA
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MELTLILKSIVLGLAVAAPLGPIGALCINRTLERGFWAGVAGGFGTALADAVYASLAALG
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
FSAFAATLATIDTPLKIIGGLFMVWLGWKSLKPKPLADAAKVGARDLFGTIAATFFLTIT
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
NPVTILSFAAIFAGLGLADASGTTNAFFVVAGVFLGSLLWWFLLSGGIALARQRLPPSFA
CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHH
RWVSCLSGLILISFGLFALGSIA
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]