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The map label for this gene is xylA [H]

Identifier: 222102691

GI number: 222102691

Start: 338738

End: 339718

Strand: Direct

Name: xylA [H]

Synonym: Avi_7362

Alternate gene names: 222102691

Gene position: 338738-339718 (Clockwise)

Preceding gene: 222102690

Following gene: 222102692

Centisome position: 53.62

GC content: 58.1

Gene sequence:

>981_bases
GTGACCCAGCTGAAATTTGCAACCCGCCTGAATTCCTTTGCCTCCTGCCCAAAGGCAGAATGGCCGGACCTGTCCGGCAA
GCCGACCATGCTGCAAATGGTAAAGCGTGCCGCAAAAGTCGATGGGCTAACGGATCTCGATCTCAATTATCCCGATCATG
TTGGCGAAGATCCTGCTGTTTTGGCCCGCCAGATTGGCGATACGGGCCTGGCAATCAATGGGTTCGCCATGCGCTATTAC
ACCAATTCCGCCTTCAAGATCGGCGCATTCACCAATCCAGACCCCGAGGTCCGGCGGGAAGCCATCGATCTCACCAAGGC
CGGTATTGACGCAGCCCGTGCAGCAGGCAGCCGGTTGATGACGCTCTGGCTCGGCCAGGATGGGTTCGATTATGCCTTCC
AGGCGGATTATCACACCCTGTGGCAACACGAAATTGATGGAATCCGTGAAGTTTGCGCCCATGACCCGGATTGCCAGATC
AGCATCGAGTACAAGCCGAACGAACCTCGGTCCTACAGCCTGATGCCAGATGCGGCAACGACATTGCTGGCCATCAGGGA
TGTCGATATGCCCAATCTTGGTGTGACGCTGGACTTTGCCCACGTTCTCTACGCCGATGAACAGCCAGCCTTTGCCGCCG
CCCTGATTGCCCGCCATAGCCGCGTTCTCGGTGTGCATCTGAACGATGGCTATGCCAAGCGCGACGATGGCCTGATGGTG
GGCGCGGTCCACACCCAGCAGACCATCGAGCTTCTGCGCCAGATCCGCAAGGACGGCTACGATGGCGCTATCTACTTCGA
CACGTTCCCGGACATGACGGGTCTCGATCCCGTCCACGAATGCGAGGTCAATATCCAGACCGTCAAGCGCATGTTGCGGA
TTGTCGATCGCCTCGATCAGGACAATCGTCTTTCGGGCGCCATCGACCGTCAGGATGCCGTGTCCGCGCAGGCCATCGTT
CAGGAACTGATGCTGGGCTAA

Upstream 100 bases:

>100_bases
CGGCTCCAGGCAATTCACTGGGGTCTAAGAGATTTTTTACTTTACAAATCACAAATATTTTGTGAAGTATGAAGTGTAGT
GATCAAAGTGAGCCAGAGCC

Downstream 100 bases:

>100_bases
GGCCCGCAATTCCAAATACCCCGAGATTTCAGACCTTTGTAACCAAAGGCATGCCGGAGGCATGCTTGATGATACCACCT
GGGAGGAACCGATGAAGACC

Product: xylose isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MTQLKFATRLNSFASCPKAEWPDLSGKPTMLQMVKRAAKVDGLTDLDLNYPDHVGEDPAVLARQIGDTGLAINGFAMRYY
TNSAFKIGAFTNPDPEVRREAIDLTKAGIDAARAAGSRLMTLWLGQDGFDYAFQADYHTLWQHEIDGIREVCAHDPDCQI
SIEYKPNEPRSYSLMPDAATTLLAIRDVDMPNLGVTLDFAHVLYADEQPAFAAALIARHSRVLGVHLNDGYAKRDDGLMV
GAVHTQQTIELLRQIRKDGYDGAIYFDTFPDMTGLDPVHECEVNIQTVKRMLRIVDRLDQDNRLSGAIDRQDAVSAQAIV
QELMLG

Sequences:

>Translated_326_residues
MTQLKFATRLNSFASCPKAEWPDLSGKPTMLQMVKRAAKVDGLTDLDLNYPDHVGEDPAVLARQIGDTGLAINGFAMRYY
TNSAFKIGAFTNPDPEVRREAIDLTKAGIDAARAAGSRLMTLWLGQDGFDYAFQADYHTLWQHEIDGIREVCAHDPDCQI
SIEYKPNEPRSYSLMPDAATTLLAIRDVDMPNLGVTLDFAHVLYADEQPAFAAALIARHSRVLGVHLNDGYAKRDDGLMV
GAVHTQQTIELLRQIRKDGYDGAIYFDTFPDMTGLDPVHECEVNIQTVKRMLRIVDRLDQDNRLSGAIDRQDAVSAQAIV
QELMLG
>Mature_325_residues
TQLKFATRLNSFASCPKAEWPDLSGKPTMLQMVKRAAKVDGLTDLDLNYPDHVGEDPAVLARQIGDTGLAINGFAMRYYT
NSAFKIGAFTNPDPEVRREAIDLTKAGIDAARAAGSRLMTLWLGQDGFDYAFQADYHTLWQHEIDGIREVCAHDPDCQIS
IEYKPNEPRSYSLMPDAATTLLAIRDVDMPNLGVTLDFAHVLYADEQPAFAAALIARHSRVLGVHLNDGYAKRDDGLMVG
AVHTQQTIELLRQIRKDGYDGAIYFDTFPDMTGLDPVHECEVNIQTVKRMLRIVDRLDQDNRLSGAIDRQDAVSAQAIVQ
ELMLG

Specific function: Unknown

COG id: COG4952

COG function: function code M; Predicted sugar isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xylose isomerase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307
- InterPro:   IPR013453
- InterPro:   IPR001998 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: =5.3.1.5 [H]

Molecular weight: Translated: 36214; Mature: 36083

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQLKFATRLNSFASCPKAEWPDLSGKPTMLQMVKRAAKVDGLTDLDLNYPDHVGEDPAV
CCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
LARQIGDTGLAINGFAMRYYTNSAFKIGAFTNPDPEVRREAIDLTKAGIDAARAAGSRLM
HHHHHCCCCEEEEEEEEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
TLWLGQDGFDYAFQADYHTLWQHEIDGIREVCAHDPDCQISIEYKPNEPRSYSLMPDAAT
EEEECCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEECCHHHH
TLLAIRDVDMPNLGVTLDFAHVLYADEQPAFAAALIARHSRVLGVHLNDGYAKRDDGLMV
HEEEEECCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCEEE
GAVHTQQTIELLRQIRKDGYDGAIYFDTFPDMTGLDPVHECEVNIQTVKRMLRIVDRLDQ
EEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCC
DNRLSGAIDRQDAVSAQAIVQELMLG
CCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TQLKFATRLNSFASCPKAEWPDLSGKPTMLQMVKRAAKVDGLTDLDLNYPDHVGEDPAV
CCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
LARQIGDTGLAINGFAMRYYTNSAFKIGAFTNPDPEVRREAIDLTKAGIDAARAAGSRLM
HHHHHCCCCEEEEEEEEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
TLWLGQDGFDYAFQADYHTLWQHEIDGIREVCAHDPDCQISIEYKPNEPRSYSLMPDAAT
EEEECCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEECCHHHH
TLLAIRDVDMPNLGVTLDFAHVLYADEQPAFAAALIARHSRVLGVHLNDGYAKRDDGLMV
HEEEEECCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCEEE
GAVHTQQTIELLRQIRKDGYDGAIYFDTFPDMTGLDPVHECEVNIQTVKRMLRIVDRLDQ
EEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCC
DNRLSGAIDRQDAVSAQAIVQELMLG
CCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2798103; 3237716; 1610791; 10089406; 1610792; 1610793 [H]