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The map label for this gene is rbsK [H]

Identifier: 222102690

GI number: 222102690

Start: 337708

End: 338634

Strand: Direct

Name: rbsK [H]

Synonym: Avi_7361

Alternate gene names: 222102690

Gene position: 337708-338634 (Clockwise)

Preceding gene: 222102689

Following gene: 222102691

Centisome position: 53.45

GC content: 62.57

Gene sequence:

>927_bases
ATGGGCAAGGGCGTTTCGATACTCGGAATCTTTGTTGCCGATACCGCCTATCTCGCGGCCCGGCTGCCGGTCGTAGGCGA
GACGATCACCGGCAGCGGCTTTTCCGTCGGGCCGGGCGGCAAGGGTTCCAACCAGGCGGTTGCGGCAGCAAGGGCCGGGG
AGGAATCGAGCGTCTCCTTCATCTCGAAGATCGGTTGCGACGCGTTCGGTGATCTGGCGTTGAAGACCTATGCGGATGCG
GGTGTCCTGCCAAAACTGACCATTATGGACGACCAGCCCACCGGTGCCGCGTTCATCTATGTCAACGACAAGACTGGCGA
CAATGCCATCATTGTCTATCCAGGCGCTGCCGGAACCATTACCATTGAGGATGTCGAGGCGGCGCGGCAAACCATCGAGA
CCAGCGCGATTTTCGTAACGCAGCTTGAGCAGCCCGCCGAGGCGGCCCACCATGGGCTGATGATCGCCCGTAAGGCTGGC
GTCACCACGATCTTCAACCCCGCCCCCGCCGAGCCGTTTCCAGACGCGATCTATCCGCTATGCGACTATATCATTCCCAA
CGAAACCGAAGCCGCCGCATTGGTTGGCTTTCCGCTCGATACGATTGAAGATGCGAGGCGGGCGGGGGATGTGCTTATGG
CTCGCGGTGTCGATACTGCTATCATAACGCTGGGCAGCAGAGGCGTGTTGTTTCATAGCGCCGATGCCTCGGTGGCGGTT
CCGGCCATTGCAGCCGGGCCTGTCATCGATACGACAGGGGCAGGGGACGCCTTCGTCGGCGGTTTTGCGGCAGCGCTTGC
CGATGGACTTGCCCCGCTCGACGCGGTCCGGTTTGGATGTGCGACGGCGGGCATCGCCGTTACCCGCCGGGGAACCGCGC
CCGCCATGCCGGAGCGCAGCGAAATCGAGGCATTGCTGCGTGGCTGA

Upstream 100 bases:

>100_bases
AAGGCCTATTGTGTGATTTCAACCGGCGAAACCCGCTTCTACGGCTGCTTCCTGTTCACCAAGGGCGTCATCCCACCGGC
TGGAGCATAAGGAGAGCAGG

Downstream 100 bases:

>100_bases
GGTCGGCTCCAGGCAATTCACTGGGGTCTAAGAGATTTTTTACTTTACAAATCACAAATATTTTGTGAAGTATGAAGTGT
AGTGATCAAAGTGAGCCAGA

Product: ribokinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MGKGVSILGIFVADTAYLAARLPVVGETITGSGFSVGPGGKGSNQAVAAARAGEESSVSFISKIGCDAFGDLALKTYADA
GVLPKLTIMDDQPTGAAFIYVNDKTGDNAIIVYPGAAGTITIEDVEAARQTIETSAIFVTQLEQPAEAAHHGLMIARKAG
VTTIFNPAPAEPFPDAIYPLCDYIIPNETEAAALVGFPLDTIEDARRAGDVLMARGVDTAIITLGSRGVLFHSADASVAV
PAIAAGPVIDTTGAGDAFVGGFAAALADGLAPLDAVRFGCATAGIAVTRRGTAPAMPERSEIEALLRG

Sequences:

>Translated_308_residues
MGKGVSILGIFVADTAYLAARLPVVGETITGSGFSVGPGGKGSNQAVAAARAGEESSVSFISKIGCDAFGDLALKTYADA
GVLPKLTIMDDQPTGAAFIYVNDKTGDNAIIVYPGAAGTITIEDVEAARQTIETSAIFVTQLEQPAEAAHHGLMIARKAG
VTTIFNPAPAEPFPDAIYPLCDYIIPNETEAAALVGFPLDTIEDARRAGDVLMARGVDTAIITLGSRGVLFHSADASVAV
PAIAAGPVIDTTGAGDAFVGGFAAALADGLAPLDAVRFGCATAGIAVTRRGTAPAMPERSEIEALLRG
>Mature_307_residues
GKGVSILGIFVADTAYLAARLPVVGETITGSGFSVGPGGKGSNQAVAAARAGEESSVSFISKIGCDAFGDLALKTYADAG
VLPKLTIMDDQPTGAAFIYVNDKTGDNAIIVYPGAAGTITIEDVEAARQTIETSAIFVTQLEQPAEAAHHGLMIARKAGV
TTIFNPAPAEPFPDAIYPLCDYIIPNETEAAALVGFPLDTIEDARRAGDVLMARGVDTAIITLGSRGVLFHSADASVAVP
AIAAGPVIDTTGAGDAFVGGFAAALADGLAPLDAVRFGCATAGIAVTRRGTAPAMPERSEIEALLRG

Specific function: Ribose metabolism; first step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Homo sapiens, GI11545855, Length=300, Percent_Identity=37, Blast_Score=156, Evalue=2e-38,
Organism=Homo sapiens, GI32484973, Length=275, Percent_Identity=28.7272727272727, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI32484975, Length=275, Percent_Identity=28.7272727272727, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI1790193, Length=301, Percent_Identity=38.2059800664452, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI87081971, Length=283, Percent_Identity=28.6219081272085, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI87082343, Length=302, Percent_Identity=27.1523178807947, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788491, Length=255, Percent_Identity=23.921568627451, Blast_Score=66, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17532905, Length=304, Percent_Identity=35.1973684210526, Blast_Score=152, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6319884, Length=331, Percent_Identity=29.9093655589124, Blast_Score=127, Evalue=2e-30,
Organism=Drosophila melanogaster, GI20128807, Length=304, Percent_Identity=37.171052631579, Blast_Score=146, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24583886, Length=306, Percent_Identity=30.0653594771242, Blast_Score=112, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR011877
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.15 [H]

Molecular weight: Translated: 31220; Mature: 31088

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKGVSILGIFVADTAYLAARLPVVGETITGSGFSVGPGGKGSNQAVAAARAGEESSVSF
CCCCEEEEEEEEHHHHHHHHHCCEECCEECCCCEECCCCCCCCCCEEEEECCCCCHHHHH
ISKIGCDAFGDLALKTYADAGVLPKLTIMDDQPTGAAFIYVNDKTGDNAIIVYPGAAGTI
HHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEEECCCCCCEEEEECCCCCEE
TIEDVEAARQTIETSAIFVTQLEQPAEAAHHGLMIARKAGVTTIFNPAPAEPFPDAIYPL
EEHHHHHHHHHHHHHEEEEEECCCHHHHHHCCEEEEECCCCEEEECCCCCCCCCHHHHHH
CDYIIPNETEAAALVGFPLDTIEDARRAGDVLMARGVDTAIITLGSRGVLFHSADASVAV
HHHCCCCCCCCEEEEECCHHHHHHHHHHCCEEEECCCCEEEEEECCCCEEEECCCCCEEC
PAIAAGPVIDTTGAGDAFVGGFAAALADGLAPLDAVRFGCATAGIAVTRRGTAPAMPERS
CEEECCCEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCHH
EIEALLRG
HHHHHHCC
>Mature Secondary Structure 
GKGVSILGIFVADTAYLAARLPVVGETITGSGFSVGPGGKGSNQAVAAARAGEESSVSF
CCCEEEEEEEEHHHHHHHHHCCEECCEECCCCEECCCCCCCCCCEEEEECCCCCHHHHH
ISKIGCDAFGDLALKTYADAGVLPKLTIMDDQPTGAAFIYVNDKTGDNAIIVYPGAAGTI
HHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEEECCCCCCEEEEECCCCCEE
TIEDVEAARQTIETSAIFVTQLEQPAEAAHHGLMIARKAGVTTIFNPAPAEPFPDAIYPL
EEHHHHHHHHHHHHHEEEEEECCCHHHHHHCCEEEEECCCCEEEECCCCCCCCCHHHHHH
CDYIIPNETEAAALVGFPLDTIEDARRAGDVLMARGVDTAIITLGSRGVLFHSADASVAV
HHHCCCCCCCCEEEEECCHHHHHHHHHHCCEEEECCCCEEEEEECCCCEEEECCCCCEEC
PAIAAGPVIDTTGAGDAFVGGFAAALADGLAPLDAVRFGCATAGIAVTRRGTAPAMPERS
CEEECCCEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCHH
EIEALLRG
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]