Click here to switch to the map view.

The map label for this gene is yesQ [H]

Identifier: 222102678

GI number: 222102678

Start: 325533

End: 326369

Strand: Reverse

Name: yesQ [H]

Synonym: Avi_7346

Alternate gene names: 222102678

Gene position: 326369-325533 (Counterclockwise)

Preceding gene: 222102679

Following gene: 222102677

Centisome position: 51.66

GC content: 54.72

Gene sequence:

>837_bases
ATGCGGATTGCCGGACGCAGGATCAATGTCTCGACAATTGCCATCTACGCAACGGTCATCGCCGTCACCATCATCATGCT
GCTGCCGTTTGCCTGGATGCTGTCGGCCTCGCTAAAGCTCGACCGCGACGTTTTTGTCTTCCCGATCGAATGGATACCGG
CCCATCCGCGCTGGCAGAACTATGTCGATATCTGGACGAAGATTCCGCTGGCCCTGTTCATCTACAACACCTCGAAGCTG
ACGATCATCGTCACGCTTTTGCAATTGTTGACGTCGAGTTTCGCGGCCTATGCTTTCGCCAAACTGCATTTTCCCTTCAA
GAACACGCTGTTTCTCGGCTACATCGCCACCATCGCCATGCCCTGGCAGGTCTATATGGTGCCACAATTCCTGCTGATGC
GGGAATTCGGGCTGAACAACACCCATCTGGCACTGATCTGCTTGCAGGCGTTCACAGCCTTCGGCGTCTTCCTGATGCGG
CAGTTCTATATGTCGATCCCGACAGAACTCTGCGAAGCCGCCCGGATCGACGGGATGAACGAATACCAGATCTGGGCGAA
GATCATGCTGCCGCTGTCGAAGCCAGCGCTATCGACTCTGACGATCTTCACCTTCGTGACCACATGGAACGATTTTCTGG
GGCCGATGATCTATCTCACTAAGACCGAACTGAAGACCATCCAGATCGGGCTTCGAATGTTCATATCGCAATATTCCGCC
GAATACGGGCTGATCATGGCGGCGTCGGTCGTCGCGCTCATTCCCGTACTGATTGTCTTTCTCGCCTTGCAGCGCTTCTT
TGTTGAAGGCGTCGCATCAACCGGGCTGAAGGGGTGA

Upstream 100 bases:

>100_bases
CTGGGATCTCGGCTATTCCAGCATGATTGCGCTGGTGCTGTTCTTCCTGGTTCTGGCGGTCACCGTGGTCCAGTTCCGTC
GCCAGAGGGAGGACTGAACC

Downstream 100 bases:

>100_bases
TGCCATGAATGCCATGTTTTCCAACGCGCCACAGCCGATCACCGATCAACAGGTGACCATGGCGCTCGAGATCGCGGTCG
CCCAGGTGCGGCGCAATCTG

Product: ABC transporter membrane spanning protein (sugar)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MRIAGRRINVSTIAIYATVIAVTIIMLLPFAWMLSASLKLDRDVFVFPIEWIPAHPRWQNYVDIWTKIPLALFIYNTSKL
TIIVTLLQLLTSSFAAYAFAKLHFPFKNTLFLGYIATIAMPWQVYMVPQFLLMREFGLNNTHLALICLQAFTAFGVFLMR
QFYMSIPTELCEAARIDGMNEYQIWAKIMLPLSKPALSTLTIFTFVTTWNDFLGPMIYLTKTELKTIQIGLRMFISQYSA
EYGLIMAASVVALIPVLIVFLALQRFFVEGVASTGLKG

Sequences:

>Translated_278_residues
MRIAGRRINVSTIAIYATVIAVTIIMLLPFAWMLSASLKLDRDVFVFPIEWIPAHPRWQNYVDIWTKIPLALFIYNTSKL
TIIVTLLQLLTSSFAAYAFAKLHFPFKNTLFLGYIATIAMPWQVYMVPQFLLMREFGLNNTHLALICLQAFTAFGVFLMR
QFYMSIPTELCEAARIDGMNEYQIWAKIMLPLSKPALSTLTIFTFVTTWNDFLGPMIYLTKTELKTIQIGLRMFISQYSA
EYGLIMAASVVALIPVLIVFLALQRFFVEGVASTGLKG
>Mature_278_residues
MRIAGRRINVSTIAIYATVIAVTIIMLLPFAWMLSASLKLDRDVFVFPIEWIPAHPRWQNYVDIWTKIPLALFIYNTSKL
TIIVTLLQLLTSSFAAYAFAKLHFPFKNTLFLGYIATIAMPWQVYMVPQFLLMREFGLNNTHLALICLQAFTAFGVFLMR
QFYMSIPTELCEAARIDGMNEYQIWAKIMLPLSKPALSTLTIFTFVTTWNDFLGPMIYLTKTELKTIQIGLRMFISQYSA
EYGLIMAASVVALIPVLIVFLALQRFFVEGVASTGLKG

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=244, Percent_Identity=29.5081967213115, Blast_Score=118, Evalue=5e-28,
Organism=Escherichia coli, GI1787571, Length=280, Percent_Identity=27.5, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1790464, Length=217, Percent_Identity=28.5714285714286, Blast_Score=91, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31643; Mature: 31643

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAGRRINVSTIAIYATVIAVTIIMLLPFAWMLSASLKLDRDVFVFPIEWIPAHPRWQN
CCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCEEEEEEEECCCCCCCCH
YVDIWTKIPLALFIYNTSKLTIIVTLLQLLTSSFAAYAFAKLHFPFKNTLFLGYIATIAM
HHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHC
PWQVYMVPQFLLMREFGLNNTHLALICLQAFTAFGVFLMRQFYMSIPTELCEAARIDGMN
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC
EYQIWAKIMLPLSKPALSTLTIFTFVTTWNDFLGPMIYLTKTELKTIQIGLRMFISQYSA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHCC
EYGLIMAASVVALIPVLIVFLALQRFFVEGVASTGLKG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRIAGRRINVSTIAIYATVIAVTIIMLLPFAWMLSASLKLDRDVFVFPIEWIPAHPRWQN
CCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCEEEEEEEECCCCCCCCH
YVDIWTKIPLALFIYNTSKLTIIVTLLQLLTSSFAAYAFAKLHFPFKNTLFLGYIATIAM
HHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHC
PWQVYMVPQFLLMREFGLNNTHLALICLQAFTAFGVFLMRQFYMSIPTELCEAARIDGMN
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC
EYQIWAKIMLPLSKPALSTLTIFTFVTTWNDFLGPMIYLTKTELKTIQIGLRMFISQYSA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHCC
EYGLIMAASVVALIPVLIVFLALQRFFVEGVASTGLKG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]