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The map label for this gene is ssuC [H]

Identifier: 222102581

GI number: 222102581

Start: 189020

End: 189868

Strand: Direct

Name: ssuC [H]

Synonym: Avi_7221

Alternate gene names: 222102581

Gene position: 189020-189868 (Clockwise)

Preceding gene: 222102580

Following gene: 222102582

Centisome position: 29.92

GC content: 55.12

Gene sequence:

>849_bases
ATGGTAGCGATTTTTGAAACGATCCGGCAGGATGAAAGCAAAGCCGTGCCGAAAGCCTCCTCCTTCAGTGGCTACAGGCT
AGGTCTCTACCGTGCTGCTGCAAGCGTGATATTGCCACTGGCCGGATTTGTGCTGTGGGAACTCGCTGTTCGTTTCGGTT
GGGCCTCTGGTCGGCTCATTCCGGCACCTTCACGCATCTTGGAAACGCTTTGGCAGCTTACAATCACGGGCGAGCTTGCG
CACCATCTGGTGGCAAGCTCATTGCGTGTTCTGGTTGGCTTTGTTTCAGGCGCGGCTGCGGGTACGCTCATAGGCGCTCT
AACGGGATATTTCACCACTCTACGACGGCTGCTGGACCCTAGCCTTCAGGCGATCAGGGCTATTCCATCCATCGCCTGGG
TTCCGCTTTTCATTCTCTGGTTCGGGATTTTTGAAACATCCAAAATTGTACTGATTGCCACCGGCGTGTTTTTCCCGGTC
TACCTTGGTATTTCAACGGCTTTGCGTGAGGTTGATCGCAAGATTGTTGAGGTTGGAAAGATCTTTCGGCTGTCCAATCT
GGAGCTTGTCTGGCGCATCCTGTTTCCTGCGGTGCTGCCAAGCTTTGTCGTTTCGCTCAGGGCCGGGCTTGGTCTTGGCT
GGATGTTTGTGGTGGCAGCCGAATTCATGGGCGCTTCGGAAGGGCTGGGCTATCTGTTGGTTGATGGGCAGCAATTGGGT
AAGCCCGACCAGATCATCGCGGCAATTCTTGCCTTTGCTGTGATTGGCAAACTTTCTGATGCGCTGCTGGTGGCCCTCAC
GGCACCTTTGCTGCGCTGGCAGGATGCCTATGGTGGGGATCGGCTGTGA

Upstream 100 bases:

>100_bases
GGTGCCGAGGTGGATGTCGCAAAGGCTGTTGACGGGCTGATTGATCCGCAATTCAGCTCCGGTCTTGGACAATAGAAACG
GGCGATGTGAACGAGGCCTT

Downstream 100 bases:

>100_bases
TGTTGTCTGTCACCCATCTTGGCAAGACCTATGCGAATGGCGCTCAAGCGCTGGACAACGTCAGTTTTGATGTCAATGCG
GGCGAGATTCTGGCGATAGT

Product: ABC transporter membrane spanning protein (nitrate/sulfonates)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MVAIFETIRQDESKAVPKASSFSGYRLGLYRAAASVILPLAGFVLWELAVRFGWASGRLIPAPSRILETLWQLTITGELA
HHLVASSLRVLVGFVSGAAAGTLIGALTGYFTTLRRLLDPSLQAIRAIPSIAWVPLFILWFGIFETSKIVLIATGVFFPV
YLGISTALREVDRKIVEVGKIFRLSNLELVWRILFPAVLPSFVVSLRAGLGLGWMFVVAAEFMGASEGLGYLLVDGQQLG
KPDQIIAAILAFAVIGKLSDALLVALTAPLLRWQDAYGGDRL

Sequences:

>Translated_282_residues
MVAIFETIRQDESKAVPKASSFSGYRLGLYRAAASVILPLAGFVLWELAVRFGWASGRLIPAPSRILETLWQLTITGELA
HHLVASSLRVLVGFVSGAAAGTLIGALTGYFTTLRRLLDPSLQAIRAIPSIAWVPLFILWFGIFETSKIVLIATGVFFPV
YLGISTALREVDRKIVEVGKIFRLSNLELVWRILFPAVLPSFVVSLRAGLGLGWMFVVAAEFMGASEGLGYLLVDGQQLG
KPDQIIAAILAFAVIGKLSDALLVALTAPLLRWQDAYGGDRL
>Mature_282_residues
MVAIFETIRQDESKAVPKASSFSGYRLGLYRAAASVILPLAGFVLWELAVRFGWASGRLIPAPSRILETLWQLTITGELA
HHLVASSLRVLVGFVSGAAAGTLIGALTGYFTTLRRLLDPSLQAIRAIPSIAWVPLFILWFGIFETSKIVLIATGVFFPV
YLGISTALREVDRKIVEVGKIFRLSNLELVWRILFPAVLPSFVVSLRAGLGLGWMFVVAAEFMGASEGLGYLLVDGQQLG
KPDQIIAAILAFAVIGKLSDALLVALTAPLLRWQDAYGGDRL

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=240, Percent_Identity=38.75, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1786564, Length=194, Percent_Identity=32.9896907216495, Blast_Score=113, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30555; Mature: 30555

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAIFETIRQDESKAVPKASSFSGYRLGLYRAAASVILPLAGFVLWELAVRFGWASGRLI
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PAPSRILETLWQLTITGELAHHLVASSLRVLVGFVSGAAAGTLIGALTGYFTTLRRLLDP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
SLQAIRAIPSIAWVPLFILWFGIFETSKIVLIATGVFFPVYLGISTALREVDRKIVEVGK
HHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFRLSNLELVWRILFPAVLPSFVVSLRAGLGLGWMFVVAAEFMGASEGLGYLLVDGQQLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEECCHHCC
KPDQIIAAILAFAVIGKLSDALLVALTAPLLRWQDAYGGDRL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVAIFETIRQDESKAVPKASSFSGYRLGLYRAAASVILPLAGFVLWELAVRFGWASGRLI
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PAPSRILETLWQLTITGELAHHLVASSLRVLVGFVSGAAAGTLIGALTGYFTTLRRLLDP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
SLQAIRAIPSIAWVPLFILWFGIFETSKIVLIATGVFFPVYLGISTALREVDRKIVEVGK
HHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFRLSNLELVWRILFPAVLPSFVVSLRAGLGLGWMFVVAAEFMGASEGLGYLLVDGQQLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEECCHHCC
KPDQIIAAILAFAVIGKLSDALLVALTAPLLRWQDAYGGDRL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8011666; 9782504; 9384377 [H]