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The map label for this gene is ssuC [H]

Identifier: 222102562

GI number: 222102562

Start: 163043

End: 163828

Strand: Reverse

Name: ssuC [H]

Synonym: Avi_7196

Alternate gene names: 222102562

Gene position: 163828-163043 (Counterclockwise)

Preceding gene: 222102563

Following gene: 222102561

Centisome position: 25.93

GC content: 56.87

Gene sequence:

>786_bases
ATGGCGCAGACAGCATCCTCTCATTCTGCCGTGAACTGGACCCGTGTTCGGCGCGGCGTTGTTCTGCCTTTGCTGTTGCT
GCTGATCTGGGAGATTTCCAGCCGTACGCATCTGGTCGATCCCCGCTTTCTACCCAGTCTGGAAGAGGTGGCGCACACGG
CAAAGCGAGAGATTTTGGACAACGGCCTTGCGGGCGAACTCGGTGCGAGCCTGCTGCGCAATCTCTCGGGTTTTGGCATT
GGTGCCGTGCTGGGCATCAGCTTTGGCACGCTTGTGGTGCTGACAAAACTTGGCGAACGGCTAGTGATGCCAACCTTCAA
CGGGCTGAAACAGATTTCGCTTCTGGCATGGATCCCGCTGATTTCCATCTGGTTCGGCTTTGGCGAACAGGCAAAAATTG
TCTTTGTCGCGCTGGCGGCCTTCATCCCCATTGCGCTCAATACATTTGACGGTATCCGTCAGGTACCGCGTGACCTGATC
GAAGTTGGCCGGGCGCTGCGTTTTTCGCCACGCCAGCGGATCTTCACCATCTATCTGCCCTCGGCCCTGCCGATGATTGC
CACGGGCGTTCATCTTGGCCTGATATATTCCTGGCTGGCCACCGTGGGTGCAGAATATTTTCTTGCCGTTGGCCCGGGCA
TTGGCGGGTTGGTAATTGCCGGACGCGAACGTTTTGATATGTCCCTGGTGATGGTCGGCGTCATCATTCTGGGACTGGTT
GGCTTTATATTCAACCGTCTCGCCGCTGCCCTCGAAACACATCTGTTGCGTTGGCGGGTCAACTGA

Upstream 100 bases:

>100_bases
TGGCCATGGTGGTGATCGGGCTGGTTGGTTTTATCATGGATCGCGGCTTGCGGCGCACCGAAAACCTGCTGCAACGCTGG
AAGCAGGAGGAGGCGTGATC

Downstream 100 bases:

>100_bases
CACCATCATGCTGCGAATGGAATTTTCCGGAGACGTGCTGATATGACAACACAGAAACAATTGCATCTGGGTGCTTTCAT
GCGTCCGGTCAGTCTTCACA

Product: sulfate ester transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MAQTASSHSAVNWTRVRRGVVLPLLLLLIWEISSRTHLVDPRFLPSLEEVAHTAKREILDNGLAGELGASLLRNLSGFGI
GAVLGISFGTLVVLTKLGERLVMPTFNGLKQISLLAWIPLISIWFGFGEQAKIVFVALAAFIPIALNTFDGIRQVPRDLI
EVGRALRFSPRQRIFTIYLPSALPMIATGVHLGLIYSWLATVGAEYFLAVGPGIGGLVIAGRERFDMSLVMVGVIILGLV
GFIFNRLAAALETHLLRWRVN

Sequences:

>Translated_261_residues
MAQTASSHSAVNWTRVRRGVVLPLLLLLIWEISSRTHLVDPRFLPSLEEVAHTAKREILDNGLAGELGASLLRNLSGFGI
GAVLGISFGTLVVLTKLGERLVMPTFNGLKQISLLAWIPLISIWFGFGEQAKIVFVALAAFIPIALNTFDGIRQVPRDLI
EVGRALRFSPRQRIFTIYLPSALPMIATGVHLGLIYSWLATVGAEYFLAVGPGIGGLVIAGRERFDMSLVMVGVIILGLV
GFIFNRLAAALETHLLRWRVN
>Mature_260_residues
AQTASSHSAVNWTRVRRGVVLPLLLLLIWEISSRTHLVDPRFLPSLEEVAHTAKREILDNGLAGELGASLLRNLSGFGIG
AVLGISFGTLVVLTKLGERLVMPTFNGLKQISLLAWIPLISIWFGFGEQAKIVFVALAAFIPIALNTFDGIRQVPRDLIE
VGRALRFSPRQRIFTIYLPSALPMIATGVHLGLIYSWLATVGAEYFLAVGPGIGGLVIAGRERFDMSLVMVGVIILGLVG
FIFNRLAAALETHLLRWRVN

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=238, Percent_Identity=35.7142857142857, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1786564, Length=240, Percent_Identity=29.1666666666667, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1789033, Length=169, Percent_Identity=32.5443786982249, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28502; Mature: 28371

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTASSHSAVNWTRVRRGVVLPLLLLLIWEISSRTHLVDPRFLPSLEEVAHTAKREILD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHCCCHHHHHHHHHHHHHH
NGLAGELGASLLRNLSGFGIGAVLGISFGTLVVLTKLGERLVMPTFNGLKQISLLAWIPL
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHH
ISIWFGFGEQAKIVFVALAAFIPIALNTFDGIRQVPRDLIEVGRALRFSPRQRIFTIYLP
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
SALPMIATGVHLGLIYSWLATVGAEYFLAVGPGIGGLVIAGRERFDMSLVMVGVIILGLV
CHHHHHHHHHHHHHHHHHHHHHCHHHEEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHH
GFIFNRLAAALETHLLRWRVN
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AQTASSHSAVNWTRVRRGVVLPLLLLLIWEISSRTHLVDPRFLPSLEEVAHTAKREILD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHCCCHHHHHHHHHHHHHH
NGLAGELGASLLRNLSGFGIGAVLGISFGTLVVLTKLGERLVMPTFNGLKQISLLAWIPL
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHH
ISIWFGFGEQAKIVFVALAAFIPIALNTFDGIRQVPRDLIEVGRALRFSPRQRIFTIYLP
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
SALPMIATGVHLGLIYSWLATVGAEYFLAVGPGIGGLVIAGRERFDMSLVMVGVIILGLV
CHHHHHHHHHHHHHHHHHHHHHCHHHEEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHH
GFIFNRLAAALETHLLRWRVN
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8011666; 9782504; 9384377 [H]