| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is yajO [H]
Identifier: 222102554
GI number: 222102554
Start: 152887
End: 153936
Strand: Direct
Name: yajO [H]
Synonym: Avi_7188
Alternate gene names: 222102554
Gene position: 152887-153936 (Clockwise)
Preceding gene: 222102553
Following gene: 222102555
Centisome position: 24.2
GC content: 58.86
Gene sequence:
>1050_bases ATGGTTGACTATCGTTATCTGGGACGCAGTGCGCTGAAAGTTTCACCCCTCAGCCTTGGCACGATGATGTTTGGCGGCCC AACGCCGGATGAAGTGGCCTTTCGCATTATCGACAAGGCGCGCGAGCAGGGCATTAATTTCATTGATACGGCAGATGTCT ATCACGATGGCAAATCCGAGGAAGTGGTCGGGCGTGGCATCAAGGCAAGCCGTGATCACTGGGTTTTGGCGACAAAATTT GTCAATTCCCGCGAAAAAGGTCCCAATCTCGGCGGCCAGTCGCGCAAATGGGTGATCGAGACGGTGGAAAATTCGCTGCG CCGCCTCAACACCGATTACATCGACATTCTCTATTTCCACCGTGCGGTGTTTGATGCCCCATTGGAAGAGCCGGTGCGCG CCATTGCCGATCTGATCCGTGCAGGCAAGCTGCGCTATTTTGGCGTCTCGAATTTCCGTGGCTGGCGCATTGCAGAAATT GCGCATCTGGCCGATCAGCTCGGCATTGATCGCCCCATTGCCAGCCAGCCGCTATACAATATCGTCAACCGCACCGCAGA GGCTGAACAGCTTCCCGCCGCCCATCATTACGGGCTTGGTGTTGTGTCCTACTCGCCGCTGGCGCGTGGGGTTTTGACGG GCAAATATGAGCCGGGCAAGGCACCCGCCGCCGATACCCGCGCAGGCCGTGGCGACAAGCGCATTCTGGAAACCGAATGG CGGCCTGAATCGGTGGAGATCGCCCGCAAGGTGGCCGCCCACGCCCACGCCAAGGGCATTTCCGCTGCCGATTTCGCCCT CGCTTGGGTGCTGAACAACCGCTACATCACCGCCGCCATTACTGGTCCTCGCACAGAGGAGCATTGGGATGGCTATATCC GTGCTCTGGATGTGCGGCTGGATGCAGAGGATGAGGCGCTGGTCAACAGTCTGGTCGCTGAGGGGCATCCGTCTACGCCG GGCTTTAATGACCCAAGCCACCCGGTTGAAGGCCGAGTGCCACGCTATAACGATCAGCCCTCGGTTAAGCCGGTTCGCGC CGTTGCCTGA
Upstream 100 bases:
>100_bases AGATCTCTGTCGTGAACAGGCACCGGATTATCAACTGTTTGGTCAAGCCCATGCCGTGGCCTGCCATCACGCCAACGAAC ACTGAAATGGAGTAAGGACT
Downstream 100 bases:
>100_bases TCATGGATGTGGCAGCCGGGGTGAAGATGAACACTCCGGCTGCCTGCTCAGTTTTGAAGGATGATGACCATGCCCCACAG CGCGCGTGTTCCAGATAGCA
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MVDYRYLGRSALKVSPLSLGTMMFGGPTPDEVAFRIIDKAREQGINFIDTADVYHDGKSEEVVGRGIKASRDHWVLATKF VNSREKGPNLGGQSRKWVIETVENSLRRLNTDYIDILYFHRAVFDAPLEEPVRAIADLIRAGKLRYFGVSNFRGWRIAEI AHLADQLGIDRPIASQPLYNIVNRTAEAEQLPAAHHYGLGVVSYSPLARGVLTGKYEPGKAPAADTRAGRGDKRILETEW RPESVEIARKVAAHAHAKGISAADFALAWVLNNRYITAAITGPRTEEHWDGYIRALDVRLDAEDEALVNSLVAEGHPSTP GFNDPSHPVEGRVPRYNDQPSVKPVRAVA
Sequences:
>Translated_349_residues MVDYRYLGRSALKVSPLSLGTMMFGGPTPDEVAFRIIDKAREQGINFIDTADVYHDGKSEEVVGRGIKASRDHWVLATKF VNSREKGPNLGGQSRKWVIETVENSLRRLNTDYIDILYFHRAVFDAPLEEPVRAIADLIRAGKLRYFGVSNFRGWRIAEI AHLADQLGIDRPIASQPLYNIVNRTAEAEQLPAAHHYGLGVVSYSPLARGVLTGKYEPGKAPAADTRAGRGDKRILETEW RPESVEIARKVAAHAHAKGISAADFALAWVLNNRYITAAITGPRTEEHWDGYIRALDVRLDAEDEALVNSLVAEGHPSTP GFNDPSHPVEGRVPRYNDQPSVKPVRAVA >Mature_349_residues MVDYRYLGRSALKVSPLSLGTMMFGGPTPDEVAFRIIDKAREQGINFIDTADVYHDGKSEEVVGRGIKASRDHWVLATKF VNSREKGPNLGGQSRKWVIETVENSLRRLNTDYIDILYFHRAVFDAPLEEPVRAIADLIRAGKLRYFGVSNFRGWRIAEI AHLADQLGIDRPIASQPLYNIVNRTAEAEQLPAAHHYGLGVVSYSPLARGVLTGKYEPGKAPAADTRAGRGDKRILETEW RPESVEIARKVAAHAHAKGISAADFALAWVLNNRYITAAITGPRTEEHWDGYIRALDVRLDAEDEALVNSLVAEGHPSTP GFNDPSHPVEGRVPRYNDQPSVKPVRAVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=305, Percent_Identity=34.4262295081967, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI27436962, Length=303, Percent_Identity=34.6534653465347, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI27436969, Length=303, Percent_Identity=34.983498349835, Blast_Score=159, Evalue=3e-39, Organism=Homo sapiens, GI4504825, Length=303, Percent_Identity=34.983498349835, Blast_Score=159, Evalue=3e-39, Organism=Homo sapiens, GI27436966, Length=303, Percent_Identity=34.3234323432343, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI27436971, Length=311, Percent_Identity=32.7974276527331, Blast_Score=149, Evalue=4e-36, Organism=Homo sapiens, GI223718702, Length=336, Percent_Identity=30.0595238095238, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI41152114, Length=334, Percent_Identity=28.7425149700599, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI41327764, Length=336, Percent_Identity=28.5714285714286, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI223718708, Length=231, Percent_Identity=31.1688311688312, Blast_Score=72, Evalue=8e-13, Organism=Escherichia coli, GI87081735, Length=312, Percent_Identity=36.8589743589744, Blast_Score=189, Evalue=3e-49, Organism=Escherichia coli, GI1789375, Length=329, Percent_Identity=30.6990881458967, Blast_Score=143, Evalue=2e-35, Organism=Escherichia coli, GI1789199, Length=338, Percent_Identity=31.6568047337278, Blast_Score=124, Evalue=7e-30, Organism=Escherichia coli, GI1788070, Length=332, Percent_Identity=28.6144578313253, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1788081, Length=268, Percent_Identity=32.4626865671642, Blast_Score=102, Evalue=3e-23, Organism=Caenorhabditis elegans, GI212645785, Length=291, Percent_Identity=24.3986254295533, Blast_Score=80, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6325169, Length=325, Percent_Identity=31.6923076923077, Blast_Score=140, Evalue=4e-34, Organism=Saccharomyces cerevisiae, GI6323998, Length=345, Percent_Identity=28.695652173913, Blast_Score=124, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6319951, Length=338, Percent_Identity=28.698224852071, Blast_Score=121, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6319958, Length=314, Percent_Identity=28.9808917197452, Blast_Score=118, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6322615, Length=267, Percent_Identity=27.7153558052434, Blast_Score=97, Evalue=5e-21, Organism=Saccharomyces cerevisiae, GI6321052, Length=156, Percent_Identity=35.2564102564103, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI45549126, Length=319, Percent_Identity=26.0188087774295, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI24640980, Length=315, Percent_Identity=25.3968253968254, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI24646155, Length=322, Percent_Identity=27.9503105590062, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI24646159, Length=221, Percent_Identity=28.0542986425339, Blast_Score=82, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 38649; Mature: 38649
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDYRYLGRSALKVSPLSLGTMMFGGPTPDEVAFRIIDKAREQGINFIDTADVYHDGKSE CCCHHHHCCCCEEECCCEECCEECCCCCHHHHHHHHHHHHHHCCCCEEECHHHHCCCCCH EVVGRGIKASRDHWVLATKFVNSREKGPNLGGQSRKWVIETVENSLRRLNTDYIDILYFH HHHHCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH RAVFDAPLEEPVRAIADLIRAGKLRYFGVSNFRGWRIAEIAHLADQLGIDRPIASQPLYN HHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHH IVNRTAEAEQLPAAHHYGLGVVSYSPLARGVLTGKYEPGKAPAADTRAGRGDKRILETEW HHHCCHHHHHCCCHHHCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCC RPESVEIARKVAAHAHAKGISAADFALAWVLNNRYITAAITGPRTEEHWDGYIRALDVRL CCHHHHHHHHHHHHHHHCCCCHHHHHEEEEECCCEEEEEECCCCCHHHHCCEEEEEEEEE DAEDEALVNSLVAEGHPSTPGFNDPSHPVEGRVPRYNDQPSVKPVRAVA CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC >Mature Secondary Structure MVDYRYLGRSALKVSPLSLGTMMFGGPTPDEVAFRIIDKAREQGINFIDTADVYHDGKSE CCCHHHHCCCCEEECCCEECCEECCCCCHHHHHHHHHHHHHHCCCCEEECHHHHCCCCCH EVVGRGIKASRDHWVLATKFVNSREKGPNLGGQSRKWVIETVENSLRRLNTDYIDILYFH HHHHCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH RAVFDAPLEEPVRAIADLIRAGKLRYFGVSNFRGWRIAEIAHLADQLGIDRPIASQPLYN HHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHH IVNRTAEAEQLPAAHHYGLGVVSYSPLARGVLTGKYEPGKAPAADTRAGRGDKRILETEW HHHCCHHHHHCCCHHHCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCC RPESVEIARKVAAHAHAKGISAADFALAWVLNNRYITAAITGPRTEEHWDGYIRALDVRL CCHHHHHHHHHHHHHHHCCCCHHHHHEEEEECCCEEEEEECCCCCHHHHCCEEEEEEEEE DAEDEALVNSLVAEGHPSTPGFNDPSHPVEGRVPRYNDQPSVKPVRAVA CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]