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The map label for this gene is dppC [H]

Identifier: 222102544

GI number: 222102544

Start: 140576

End: 141454

Strand: Reverse

Name: dppC [H]

Synonym: Avi_7173

Alternate gene names: 222102544

Gene position: 141454-140576 (Counterclockwise)

Preceding gene: 222102545

Following gene: 222102543

Centisome position: 22.39

GC content: 60.41

Gene sequence:

>879_bases
ATGAGCAGTGTTGAAATTCTCTCCCTGCAAGCCAATGGCGTGAAATCGGATAGCGTCAAGCGCCGGGCGTCCCTCACCCG
TTTTAAAGGCTTGCGCCCCGGTCTTGTGCTGGCGTGGGTGGTCATGGTCACCGTACTGCTCTGGGCAGCTATGCCGTGGC
TTTTTACCAGCTATAACCCGCTGGAGGGCATTCCCGGCGGGCAGTTGAAAGCGCCGTCAGCGGCGCATCTTCTCGGCACG
GACTCCCTTGGGCGCGATCTTTATGCGCGGATGGTCTATGGCTCCGTTCATTCGCTGTCGGGTGCCCTTGCCGCCGTGGG
CGTGGGACTGGTGGCAGGCACCCTGCTTGGCCTTTTTGCCGGAGCCATTGGCGGGCGCTGGGATATGATCATCATGCGCT
TTGTCGATGTGCTGCTGTCTATTCCCACCCTGCTTCTGTCTCTCAGCATCATTATTCTGCTTGGCTTTGGCACGATCAAT
GCCGCGATTGCGGTGGGTGTTACGGCCATTGCCGGTTTTGCCCGGTTGACCCGATCCGAAGTGGTGCGGGTGCGGCGGGC
GGATTTTGTTGAAGCGGCCTATGGCAGTGGCGGTACGTTTTTGAGCGTGCTGTGGCGGCATATCTTGCCCAATTCGCTGA
CCTCGGTGATTGCCTATGCCGCCGTGCAATTTGGCTGGGCCATTCTGCAAATGTCCACCCTAGGATTCCTCGGCTATGGC
GCACCGCCGCCAACACCGGAATGGGGCCTGCTGATTTCCGAAGGGCGCAATTACCTCGCCACCGCCTGGTGGCTGACCAC
AGCCCCCGGCCTGATTGTGGTCGCCGTGGTGCTGTCTGCCAACCGCATCAGCCAATCCTTGGGGAGCACCAGCCGATGA

Upstream 100 bases:

>100_bases
TGGTGATTTCCGCCACCGCCTTTGTCATCATCAATCTTCTGGTCGATCTTGCCTATCCCCTTCTCGATCCCCGCCTGAGA
AGCCGGAACGGAGCCGCATC

Downstream 100 bases:

>100_bases
GTAAGACCCCTTCTGTTCTCGATATCAGAGAACTGAATATTTCCTATGGAGATGGAGAGAGCCGCACCCGCGTGGTGCAT
GATGTGTCGCTCGAAGTCGG

Product: ABC transporter membrane spanning protein (dipeptide)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MSSVEILSLQANGVKSDSVKRRASLTRFKGLRPGLVLAWVVMVTVLLWAAMPWLFTSYNPLEGIPGGQLKAPSAAHLLGT
DSLGRDLYARMVYGSVHSLSGALAAVGVGLVAGTLLGLFAGAIGGRWDMIIMRFVDVLLSIPTLLLSLSIIILLGFGTIN
AAIAVGVTAIAGFARLTRSEVVRVRRADFVEAAYGSGGTFLSVLWRHILPNSLTSVIAYAAVQFGWAILQMSTLGFLGYG
APPPTPEWGLLISEGRNYLATAWWLTTAPGLIVVAVVLSANRISQSLGSTSR

Sequences:

>Translated_292_residues
MSSVEILSLQANGVKSDSVKRRASLTRFKGLRPGLVLAWVVMVTVLLWAAMPWLFTSYNPLEGIPGGQLKAPSAAHLLGT
DSLGRDLYARMVYGSVHSLSGALAAVGVGLVAGTLLGLFAGAIGGRWDMIIMRFVDVLLSIPTLLLSLSIIILLGFGTIN
AAIAVGVTAIAGFARLTRSEVVRVRRADFVEAAYGSGGTFLSVLWRHILPNSLTSVIAYAAVQFGWAILQMSTLGFLGYG
APPPTPEWGLLISEGRNYLATAWWLTTAPGLIVVAVVLSANRISQSLGSTSR
>Mature_291_residues
SSVEILSLQANGVKSDSVKRRASLTRFKGLRPGLVLAWVVMVTVLLWAAMPWLFTSYNPLEGIPGGQLKAPSAAHLLGTD
SLGRDLYARMVYGSVHSLSGALAAVGVGLVAGTLLGLFAGAIGGRWDMIIMRFVDVLLSIPTLLLSLSIIILLGFGTINA
AIAVGVTAIAGFARLTRSEVVRVRRADFVEAAYGSGGTFLSVLWRHILPNSLTSVIAYAAVQFGWAILQMSTLGFLGYGA
PPPTPEWGLLISEGRNYLATAWWLTTAPGLIVVAVVLSANRISQSLGSTSR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=275, Percent_Identity=38.1818181818182, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1787054, Length=281, Percent_Identity=35.2313167259786, Blast_Score=167, Evalue=7e-43,
Organism=Escherichia coli, GI1789964, Length=236, Percent_Identity=41.1016949152542, Blast_Score=148, Evalue=3e-37,
Organism=Escherichia coli, GI1789889, Length=230, Percent_Identity=33.9130434782609, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1787549, Length=233, Percent_Identity=30.9012875536481, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1787498, Length=215, Percent_Identity=33.953488372093, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1788505, Length=237, Percent_Identity=32.4894514767932, Blast_Score=98, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30866; Mature: 30735

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVEILSLQANGVKSDSVKRRASLTRFKGLRPGLVLAWVVMVTVLLWAAMPWLFTSYNP
CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
LEGIPGGQLKAPSAAHLLGTDSLGRDLYARMVYGSVHSLSGALAAVGVGLVAGTLLGLFA
CCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAIGGRWDMIIMRFVDVLLSIPTLLLSLSIIILLGFGTINAAIAVGVTAIAGFARLTRSE
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVRVRRADFVEAAYGSGGTFLSVLWRHILPNSLTSVIAYAAVQFGWAILQMSTLGFLGYG
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APPPTPEWGLLISEGRNYLATAWWLTTAPGLIVVAVVLSANRISQSLGSTSR
CCCCCCCCCEEEECCCCCEEHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSVEILSLQANGVKSDSVKRRASLTRFKGLRPGLVLAWVVMVTVLLWAAMPWLFTSYNP
CCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
LEGIPGGQLKAPSAAHLLGTDSLGRDLYARMVYGSVHSLSGALAAVGVGLVAGTLLGLFA
CCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAIGGRWDMIIMRFVDVLLSIPTLLLSLSIIILLGFGTINAAIAVGVTAIAGFARLTRSE
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVRVRRADFVEAAYGSGGTFLSVLWRHILPNSLTSVIAYAAVQFGWAILQMSTLGFLGYG
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APPPTPEWGLLISEGRNYLATAWWLTTAPGLIVVAVVLSANRISQSLGSTSR
CCCCCCCCCEEEECCCCCEEHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]