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The map label for this gene is 222102516

Identifier: 222102516

GI number: 222102516

Start: 110468

End: 110992

Strand: Direct

Name: 222102516

Synonym: Avi_7140

Alternate gene names: NA

Gene position: 110468-110992 (Clockwise)

Preceding gene: 222102512

Following gene: 222102517

Centisome position: 17.49

GC content: 52.38

Gene sequence:

>525_bases
CTGCGCGTCTTGGTTCCCATTTCCGATAGTCACATGAAATCGCACGGCACAACGGCAACCGATACCTTCGGATGTCCACT
AAAACAGTTGTCGATCAATCAAACGCTGGCAGGTTCCGATATTGTGGTCTTTCGCAAGGGAACAAGTGTCGTGAGGCTCG
ATCAGGTCAAGACATCGTCAAGCAATCGAGGTCTTGTTGTTGGTGTCTCATCGATCGGTGGTCATACGCGACGCATCCAT
CATCAACATCGTGTAAATATTAACGACTTTGCGGGAAAATCAATTTACATTCGTGAGCTCGCCGAGGCCTACAAGGCAGA
TTTCGGCGGCTCCTTTGAGTTCCTCTTATTTGAAATCTCGCCTGCGGATCTCATCCGTATTGCCGAGGGTGCGGAACTTT
CAGGCATCACCTCGCTCGCGGCCGAAACTGCGTCGAAAGACATCGTGCTTGCCAATCTTGCGCGCGCCCGATTCCGGCGC
TTGAAAAACCGGAGGACGCAAGCGCGCTGTTCGTCGACCAGATGA

Upstream 100 bases:

>100_bases
GGATTTGAAGCCACCGATCTTTGGCATGTTTCTCACGAGTTGGGGGCTCCGGTAAGTCCGGGACGGTTCAACCGCGAGAT
TGGTCTTCAAAAAGCCAAAG

Downstream 100 bases:

>100_bases
CAACCGCCATCGGGACCTACTTGGTTCAACGTTATGGCGGCCGATCCGTTGCAACCTCCAACAGACCACGAAGGGCTCTG
TTGCAAAAACTCTTTGTCGT

Product: AraC-like transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator AraC Family Protein; AraC-Like Transcriptional Regulator

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MRVLVPISDSHMKSHGTTATDTFGCPLKQLSINQTLAGSDIVVFRKGTSVVRLDQVKTSSSNRGLVVGVSSIGGHTRRIH
HQHRVNINDFAGKSIYIRELAEAYKADFGGSFEFLLFEISPADLIRIAEGAELSGITSLAAETASKDIVLANLARARFRR
LKNRRTQARCSSTR

Sequences:

>Translated_174_residues
MRVLVPISDSHMKSHGTTATDTFGCPLKQLSINQTLAGSDIVVFRKGTSVVRLDQVKTSSSNRGLVVGVSSIGGHTRRIH
HQHRVNINDFAGKSIYIRELAEAYKADFGGSFEFLLFEISPADLIRIAEGAELSGITSLAAETASKDIVLANLARARFRR
LKNRRTQARCSSTR
>Mature_174_residues
MRVLVPISDSHMKSHGTTATDTFGCPLKQLSINQTLAGSDIVVFRKGTSVVRLDQVKTSSSNRGLVVGVSSIGGHTRRIH
HQHRVNINDFAGKSIYIRELAEAYKADFGGSFEFLLFEISPADLIRIAEGAELSGITSLAAETASKDIVLANLARARFRR
LKNRRTQARCSSTR

Specific function: Unknown

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19040; Mature: 19040

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLVPISDSHMKSHGTTATDTFGCPLKQLSINQTLAGSDIVVFRKGTSVVRLDQVKTSS
CEEEEECCCCHHHCCCCCCCCCCCCCHHHEECCCEECCCEEEEEECCCCEEEEEEEECCC
SNRGLVVGVSSIGGHTRRIHHQHRVNINDFAGKSIYIRELAEAYKADFGGSFEFLLFEIS
CCCEEEEEECCCCCCHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEEEC
PADLIRIAEGAELSGITSLAAETASKDIVLANLARARFRRLKNRRTQARCSSTR
HHHEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRVLVPISDSHMKSHGTTATDTFGCPLKQLSINQTLAGSDIVVFRKGTSVVRLDQVKTSS
CEEEEECCCCHHHCCCCCCCCCCCCCHHHEECCCEECCCEEEEEECCCCEEEEEEEECCC
SNRGLVVGVSSIGGHTRRIHHQHRVNINDFAGKSIYIRELAEAYKADFGGSFEFLLFEIS
CCCEEEEEECCCCCCHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEEEC
PADLIRIAEGAELSGITSLAAETASKDIVLANLARARFRRLKNRRTQARCSSTR
HHHEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA