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The map label for this gene is kipR [H]

Identifier: 222102473

GI number: 222102473

Start: 71096

End: 71791

Strand: Direct

Name: kipR [H]

Synonym: Avi_7080

Alternate gene names: 222102473

Gene position: 71096-71791 (Clockwise)

Preceding gene: 222102467

Following gene: 222102474

Centisome position: 11.25

GC content: 60.2

Gene sequence:

>696_bases
ATGCCAGGCAATTCTTCAGGTGTCGCAGCTGTTGAACGCGCTGTTTCGATGCTGGAAGCTTTTACCGATGTCGACTATTC
GTTGACGCTCGGAGAGCTTGCGCGTCGCACGGAACTCGACAAATCCACGGTGTTGCGCATCGCGCGCTCGCTTGCGAAAT
CCTCCATGCTCGTTCGCAATGATGATGCCAGCTGGCGGCTAGGGCCGAAGCTCGTGCGTCTCGGCGGGCTGTATCAATCC
ACGTTCAAGTCATCTGCGATCGTTGAGCCTTTGCTTGCCCAGATCAGCGATGAGAGCGGCGAGAGCGCTGCGGTTTACGT
GAAAGAAGGCGTTGTCCGCGTCTGCCTTCATAGGCACGATTCCACACAATCGATCCGCCACTCGGCGCGTGTTGGCGATG
CGATGCCGCTCGATCGCGGGGCGCCCGGGCGTGTCATTCTGGCTTTCACCGGTTCCAGCGGAAAGCTCTATGACGATATT
CGCGCGAAGGGGTTTCATGTCACCATCGGCGAGCGCGACCCACAGGTCGCGAGCGTCGCCGTCCCGGTCTACCGCGACGG
ACAAGCCCTCTTTGGCTCTTTGGCTTTGACCGGCCCGCCATCGCGTTTCAACGAAGAGGCCGTGTCGAAAAATCTCGAAA
TTCTCCGCGTTGCCGCGCGCAAGCTCAGCGCTGCGCTTGGAGGAGACCCCGGCTAG

Upstream 100 bases:

>100_bases
ACAGGTAAGCGACGGTTGACGAATCCTTATTATCGGTTATTGTACTAGATGAAAAGATGTTGTACCTAGTACAACATCTT
TTTGAGGGAGGTTTGATCCA

Downstream 100 bases:

>100_bases
TTCCAGAGCGGGTGCCGGGCCCGCATAGCGTTCCTTGGGAGGAGCATATCGATGAATATGATGAGAACAGCGATCTTGGC
GGCCAGCAGTTTGCTTGCAA

Product: Transcriptional regulator

Products: NA

Alternate protein names: Kip operon repressor protein [H]

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MPGNSSGVAAVERAVSMLEAFTDVDYSLTLGELARRTELDKSTVLRIARSLAKSSMLVRNDDASWRLGPKLVRLGGLYQS
TFKSSAIVEPLLAQISDESGESAAVYVKEGVVRVCLHRHDSTQSIRHSARVGDAMPLDRGAPGRVILAFTGSSGKLYDDI
RAKGFHVTIGERDPQVASVAVPVYRDGQALFGSLALTGPPSRFNEEAVSKNLEILRVAARKLSAALGGDPG

Sequences:

>Translated_231_residues
MPGNSSGVAAVERAVSMLEAFTDVDYSLTLGELARRTELDKSTVLRIARSLAKSSMLVRNDDASWRLGPKLVRLGGLYQS
TFKSSAIVEPLLAQISDESGESAAVYVKEGVVRVCLHRHDSTQSIRHSARVGDAMPLDRGAPGRVILAFTGSSGKLYDDI
RAKGFHVTIGERDPQVASVAVPVYRDGQALFGSLALTGPPSRFNEEAVSKNLEILRVAARKLSAALGGDPG
>Mature_230_residues
PGNSSGVAAVERAVSMLEAFTDVDYSLTLGELARRTELDKSTVLRIARSLAKSSMLVRNDDASWRLGPKLVRLGGLYQST
FKSSAIVEPLLAQISDESGESAAVYVKEGVVRVCLHRHDSTQSIRHSARVGDAMPLDRGAPGRVILAFTGSSGKLYDDIR
AKGFHVTIGERDPQVASVAVPVYRDGQALFGSLALTGPPSRFNEEAVSKNLEILRVAARKLSAALGGDPG

Specific function: Transcriptional repressor of the kip gene-containing operon [H]

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

Organism=Escherichia coli, GI1786715, Length=252, Percent_Identity=21.4285714285714, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 24634; Mature: 24503

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGNSSGVAAVERAVSMLEAFTDVDYSLTLGELARRTELDKSTVLRIARSLAKSSMLVRN
CCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEC
DDASWRLGPKLVRLGGLYQSTFKSSAIVEPLLAQISDESGESAAVYVKEGVVRVCLHRHD
CCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCC
STQSIRHSARVGDAMPLDRGAPGRVILAFTGSSGKLYDDIRAKGFHVTIGERDPQVASVA
CHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCEEEEECCCCCCEEEEE
VPVYRDGQALFGSLALTGPPSRFNEEAVSKNLEILRVAARKLSAALGGDPG
EEEEECCHHHHHEEEECCCCHHCCHHHHHCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PGNSSGVAAVERAVSMLEAFTDVDYSLTLGELARRTELDKSTVLRIARSLAKSSMLVRN
CCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEC
DDASWRLGPKLVRLGGLYQSTFKSSAIVEPLLAQISDESGESAAVYVKEGVVRVCLHRHD
CCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCC
STQSIRHSARVGDAMPLDRGAPGRVILAFTGSSGKLYDDIRAKGFHVTIGERDPQVASVA
CHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCEEEEECCCCCCEEEEE
VPVYRDGQALFGSLALTGPPSRFNEEAVSKNLEILRVAARKLSAALGGDPG
EEEEECCHHHHHEEEECCCCHHCCHHHHHCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]