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The map label for this gene is traB [H]

Identifier: 222102463

GI number: 222102463

Start: 59974

End: 61059

Strand: Direct

Name: traB [H]

Synonym: Avi_7066

Alternate gene names: 222102463

Gene position: 59974-61059 (Clockwise)

Preceding gene: 222102462

Following gene: 222102464

Centisome position: 9.49

GC content: 62.06

Gene sequence:

>1086_bases
ATGACCTTGCCGGTCGTGATGCTGTTCCCGCTACTCTGGGCGCAATCGCCGTCACGTTTGGTCGCTGCTGCCGTCTCAGC
TGGTTACTTCCTCGCCGCTTCCCGCGGCTTGCCCCAGGGCGTCGCCAATTTCTACGCCGCTGATCTTTGGCCCGGCCTGC
TACTTTGGGCGGTTGCCTCGCTTGCTTTCGTTGTCGTGCATGCCGTCCTCTGGGCAAGGCAAACGGAAAGGTTACGGGCG
GTACGTTATGTGGTGGCCATGGTGCAGATGGCTCTGCCGCCATTTGGGATCATTGGCTGGGCGCATCCATTGACCGCGGC
CGGCATCCTGTTTCCAGGATGGGGATGGTTTGGTCTCGGTGCTGCCGCGATCCTGTTGGTCGTCATGACCGGTCGAAGGT
GGAAAATCGCGGTTGCGGCCCTGGTGGGACTACACGCCTGGTCCGCCACGAACTGGACGCAGCCCAAGGCACCCGACAGA
TGGAAAGGGGTTGATCTCGCGCTCGGGCAGAGGCTCGGTCGTGACAGCTCGCTCACCTATCAACGCGGTCTGATCGCAAC
CGCGCGTGCGATGGAGGACGGGAAGGCTCGTTTCGTCGTTTTGCCGGAGAGTGCGCTCGGCTTTTGGACGCCGACCGTGG
CGCGTCTCTGGCAGGATGGCTTGCAGGGATCCAGCGTCACCGTGATCGCCGGTGCAGCGGTCATCGATGCGGCCGGTTAT
GACAACGTCATGGTGGCTATCTCTGCCAGCGACGCCCGTGTTCTCTATCGAGAGCGGATGCCGGTCCCGGTCTCCATGTG
GCAGCCGTGGCTCGATTGGACAGGGCAGGGTGGAGGTGCACGCGCTGACCTTTTACGAAATCCGACCGTCGATATCGACG
GCCAGAAGATCGCGCCTTTGATCTGCTATGAGCAGCTTATCCTTTGGCCGGTCCTGCAATCGATGATCCTCTCCCCCGCC
GTCATTGTCGCCACGGGCAATGGATGGTGGACTGTCGGCACCTCGATCGTTGCCATCCAGAAGGCAAGCGTGACTGCCTG
GGGCAGGCTGTTCGGCGTGCCCGTCATCGTGGCGTTCAACACATAG

Upstream 100 bases:

>100_bases
GCCAAGCCGATCCTCACGTTTGATCCCTGAAAGCTGGCGCGGACCGGTCCTGGTCGGGCTGTCGATCGTGGCTGGGACGG
TCGGCTGGAGTGGAAACATC

Downstream 100 bases:

>100_bases
GATATTTCCCGATGGTCGATGCTGCCCTTATCCAGCAATGCGCCGATCCTGCTCTAAAACCCGCAATCGTCGAGCAGTTC
ATCGAACGGGCAGGGTCCCA

Product: conjugal transfer protein TraB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MTLPVVMLFPLLWAQSPSRLVAAAVSAGYFLAASRGLPQGVANFYAADLWPGLLLWAVASLAFVVVHAVLWARQTERLRA
VRYVVAMVQMALPPFGIIGWAHPLTAAGILFPGWGWFGLGAAAILLVVMTGRRWKIAVAALVGLHAWSATNWTQPKAPDR
WKGVDLALGQRLGRDSSLTYQRGLIATARAMEDGKARFVVLPESALGFWTPTVARLWQDGLQGSSVTVIAGAAVIDAAGY
DNVMVAISASDARVLYRERMPVPVSMWQPWLDWTGQGGGARADLLRNPTVDIDGQKIAPLICYEQLILWPVLQSMILSPA
VIVATGNGWWTVGTSIVAIQKASVTAWGRLFGVPVIVAFNT

Sequences:

>Translated_361_residues
MTLPVVMLFPLLWAQSPSRLVAAAVSAGYFLAASRGLPQGVANFYAADLWPGLLLWAVASLAFVVVHAVLWARQTERLRA
VRYVVAMVQMALPPFGIIGWAHPLTAAGILFPGWGWFGLGAAAILLVVMTGRRWKIAVAALVGLHAWSATNWTQPKAPDR
WKGVDLALGQRLGRDSSLTYQRGLIATARAMEDGKARFVVLPESALGFWTPTVARLWQDGLQGSSVTVIAGAAVIDAAGY
DNVMVAISASDARVLYRERMPVPVSMWQPWLDWTGQGGGARADLLRNPTVDIDGQKIAPLICYEQLILWPVLQSMILSPA
VIVATGNGWWTVGTSIVAIQKASVTAWGRLFGVPVIVAFNT
>Mature_360_residues
TLPVVMLFPLLWAQSPSRLVAAAVSAGYFLAASRGLPQGVANFYAADLWPGLLLWAVASLAFVVVHAVLWARQTERLRAV
RYVVAMVQMALPPFGIIGWAHPLTAAGILFPGWGWFGLGAAAILLVVMTGRRWKIAVAALVGLHAWSATNWTQPKAPDRW
KGVDLALGQRLGRDSSLTYQRGLIATARAMEDGKARFVVLPESALGFWTPTVARLWQDGLQGSSVTVIAGAAVIDAAGYD
NVMVAISASDARVLYRERMPVPVSMWQPWLDWTGQGGGARADLLRNPTVDIDGQKIAPLICYEQLILWPVLQSMILSPAV
IVATGNGWWTVGTSIVAIQKASVTAWGRLFGVPVIVAFNT

Specific function: Enhances conjugal transfer of the Ti plasmid [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016707
- InterPro:   IPR003010 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: NA

Molecular weight: Translated: 38917; Mature: 38786

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPVVMLFPLLWAQSPSRLVAAAVSAGYFLAASRGLPQGVANFYAADLWPGLLLWAVAS
CCCHHHHHHHHHHCCCHHHHHHHHHHHCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
LAFVVVHAVLWARQTERLRAVRYVVAMVQMALPPFGIIGWAHPLTAAGILFPGWGWFGLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHCCEECCCCCHHHHH
AAAILLVVMTGRRWKIAVAALVGLHAWSATNWTQPKAPDRWKGVDLALGQRLGRDSSLTY
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCH
QRGLIATARAMEDGKARFVVLPESALGFWTPTVARLWQDGLQGSSVTVIAGAAVIDAAGY
HHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEECHHHEECCCC
DNVMVAISASDARVLYRERMPVPVSMWQPWLDWTGQGGGARADLLRNPTVDIDGQKIAPL
CCEEEEEECCCCHHHHHHCCCCCHHHHCHHHCCCCCCCCCCHHHHCCCCCCCCCCCCHHH
ICYEQLILWPVLQSMILSPAVIVATGNGWWTVGTSIVAIQKASVTAWGRLFGVPVIVAFN
HHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCEEEEEEECCHHHHHHHHCCEEEEEEC
T
C
>Mature Secondary Structure 
TLPVVMLFPLLWAQSPSRLVAAAVSAGYFLAASRGLPQGVANFYAADLWPGLLLWAVAS
CCHHHHHHHHHHCCCHHHHHHHHHHHCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
LAFVVVHAVLWARQTERLRAVRYVVAMVQMALPPFGIIGWAHPLTAAGILFPGWGWFGLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHCCEECCCCCHHHHH
AAAILLVVMTGRRWKIAVAALVGLHAWSATNWTQPKAPDRWKGVDLALGQRLGRDSSLTY
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCH
QRGLIATARAMEDGKARFVVLPESALGFWTPTVARLWQDGLQGSSVTVIAGAAVIDAAGY
HHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEECHHHEECCCC
DNVMVAISASDARVLYRERMPVPVSMWQPWLDWTGQGGGARADLLRNPTVDIDGQKIAPL
CCEEEEEECCCCHHHHHHCCCCCHHHHCHHHCCCCCCCCCCHHHHCCCCCCCCCCCCHHH
ICYEQLILWPVLQSMILSPAVIVATGNGWWTVGTSIVAIQKASVTAWGRLFGVPVIVAFN
HHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCEEEEEEECCHHHHHHHHCCEEEEEEC
T
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8763953; 11743193; 11743194 [H]